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The map label for this gene is ybfF [C]

Identifier: 45657654

GI number: 45657654

Start: 2179499

End: 2180332

Strand: Reverse

Name: ybfF [C]

Synonym: LIC11788

Alternate gene names: 45657654

Gene position: 2180332-2179499 (Counterclockwise)

Preceding gene: 45657655

Following gene: 45657652

Centisome position: 50.98

GC content: 32.97

Gene sequence:

>834_bases
ATGTCTGCAGTAAATTTAAGTTTTCGTAAAATTGATTTTCAAAACGGTAAATTTTTTTCTCCCGTTTGTGGACCGATTAT
TGTTTTACACGGTCTTTTTGGATCTTCCAAAAATTGGCTGAGTGTAGGAGATTTTTTAAGTCAGTATGCAGACGTATATC
TTTTGGATCTCAGAAATCATGGAGATTCTCCGCATTCCAGTGAACATTCTATTGCTTCCATGGTGGAAGATATAGAAGTA
TGGGTAACAAAACAAAAACTAGAAAAACCGGTGATTTTAGGACATTCCATGGGTGGACTTGTTTCTATGGGATTTGCATT
AAAAAATCCGAATATTCTGTCTTTATTATTTATAGAGGACATTGCTCCTAGAAACTATCCGTTTCATTATGAAAGCGAAC
TTTTATGTCTTAGAACGGACGTTTCCAGTTTTAAATCTAGGCAGGAAATTGATTCGGCACTGACAAAAATTCTTCCGAAT
GCTTTTATCCGAAATTTTTTAGAGATGAACTTAGAACGTCTCGAAAATAACGGAGGTTATCGTTGGAAACTCAACGTAGA
AGGAGTTGCGAATTCTCCTAGGTTATTTCAGGACTTTTTTGATAAATATACAAATTATCCATATACAGGAAGAACGTATT
TTATTACAGGAGGAGTTTCGGAATATTTTCATAAAGAAGACATTGAGATAGCTCGAAATTTTTTTCCAAATTCTAAATTT
TACTTAATTCCTGGCGGTGACCATTATATTCATTTTACAAAGTCATTTGAGTTTAAAAAAATTTTGGAATCTATTTTTGA
GAAGTTAGACGATTCTGAATTTGTAGTAAACTAA

Upstream 100 bases:

>100_bases
CCAGAAAAGAAATTTACGAATCTTTCCGAAAAGATCTACAATCTCTTCCTTATAGATACGGTAGAAAATATCATAATTTT
CTAAAAATAATCCACAAAGA

Downstream 100 bases:

>100_bases
ATCCGAGCAACCAGCAGGTTCCGATCCCGAATGGAACCAGAAGAGTAAAACTGGAACCGGTCCATTTACCGAAAATTAAT
GTTAAAATTGGAGTTAGTCC

Product: alpha/beta hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MSAVNLSFRKIDFQNGKFFSPVCGPIIVLHGLFGSSKNWLSVGDFLSQYADVYLLDLRNHGDSPHSSEHSIASMVEDIEV
WVTKQKLEKPVILGHSMGGLVSMGFALKNPNILSLLFIEDIAPRNYPFHYESELLCLRTDVSSFKSRQEIDSALTKILPN
AFIRNFLEMNLERLENNGGYRWKLNVEGVANSPRLFQDFFDKYTNYPYTGRTYFITGGVSEYFHKEDIEIARNFFPNSKF
YLIPGGDHYIHFTKSFEFKKILESIFEKLDDSEFVVN

Sequences:

>Translated_277_residues
MSAVNLSFRKIDFQNGKFFSPVCGPIIVLHGLFGSSKNWLSVGDFLSQYADVYLLDLRNHGDSPHSSEHSIASMVEDIEV
WVTKQKLEKPVILGHSMGGLVSMGFALKNPNILSLLFIEDIAPRNYPFHYESELLCLRTDVSSFKSRQEIDSALTKILPN
AFIRNFLEMNLERLENNGGYRWKLNVEGVANSPRLFQDFFDKYTNYPYTGRTYFITGGVSEYFHKEDIEIARNFFPNSKF
YLIPGGDHYIHFTKSFEFKKILESIFEKLDDSEFVVN
>Mature_276_residues
SAVNLSFRKIDFQNGKFFSPVCGPIIVLHGLFGSSKNWLSVGDFLSQYADVYLLDLRNHGDSPHSSEHSIASMVEDIEVW
VTKQKLEKPVILGHSMGGLVSMGFALKNPNILSLLFIEDIAPRNYPFHYESELLCLRTDVSSFKSRQEIDSALTKILPNA
FIRNFLEMNLERLENNGGYRWKLNVEGVANSPRLFQDFFDKYTNYPYTGRTYFITGGVSEYFHKEDIEIARNFFPNSKFY
LIPGGDHYIHFTKSFEFKKILESIFEKLDDSEFVVN

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI23200008, Length=267, Percent_Identity=29.2134831460674, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI23200012, Length=247, Percent_Identity=29.1497975708502, Blast_Score=121, Evalue=8e-28,
Organism=Homo sapiens, GI223941839, Length=260, Percent_Identity=26.9230769230769, Blast_Score=90, Evalue=2e-18,
Organism=Escherichia coli, GI1786902, Length=255, Percent_Identity=27.4509803921569, Blast_Score=84, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17508535, Length=250, Percent_Identity=34, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17507063, Length=253, Percent_Identity=27.6679841897233, Blast_Score=79, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6321468, Length=268, Percent_Identity=32.089552238806, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24640348, Length=283, Percent_Identity=31.8021201413428, Blast_Score=133, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24646055, Length=258, Percent_Identity=28.2945736434109, Blast_Score=102, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012908 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF07819 PGAP1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 31892; Mature: 31760

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVNLSFRKIDFQNGKFFSPVCGPIIVLHGLFGSSKNWLSVGDFLSQYADVYLLDLRNH
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEEECCC
GDSPHSSEHSIASMVEDIEVWVTKQKLEKPVILGHSMGGLVSMGFALKNPNILSLLFIED
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCEEECCCCEEEEEEEEC
IAPRNYPFHYESELLCLRTDVSSFKSRQEIDSALTKILPNAFIRNFLEMNLERLENNGGY
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
RWKLNVEGVANSPRLFQDFFDKYTNYPYTGRTYFITGGVSEYFHKEDIEIARNFFPNSKF
EEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCE
YLIPGGDHYIHFTKSFEFKKILESIFEKLDDSEFVVN
EEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCEECC
>Mature Secondary Structure 
SAVNLSFRKIDFQNGKFFSPVCGPIIVLHGLFGSSKNWLSVGDFLSQYADVYLLDLRNH
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEEECCC
GDSPHSSEHSIASMVEDIEVWVTKQKLEKPVILGHSMGGLVSMGFALKNPNILSLLFIED
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCEEECCCCEEEEEEEEC
IAPRNYPFHYESELLCLRTDVSSFKSRQEIDSALTKILPNAFIRNFLEMNLERLENNGGY
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
RWKLNVEGVANSPRLFQDFFDKYTNYPYTGRTYFITGGVSEYFHKEDIEIARNFFPNSKF
EEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCE
YLIPGGDHYIHFTKSFEFKKILESIFEKLDDSEFVVN
EEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]