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The map label for this gene is recA

Identifier: 45657611

GI number: 45657611

Start: 2130507

End: 2131607

Strand: Direct

Name: recA

Synonym: LIC11745

Alternate gene names: 45657611

Gene position: 2130507-2131607 (Clockwise)

Preceding gene: 45657610

Following gene: 45657612

Centisome position: 49.81

GC content: 38.96

Gene sequence:

>1101_bases
ATGGGAGAAAGTATCATGAAGAAAGCAAAAGAAGATGCTCCGAGCGTAGATGATTCTAAAAAGTTAGCGATCGAGCAAGC
AATGAGCCAAATTGAAAAACAATTTGGAAAGGGTTCGATTATGAAATTAGGATCGGATTCTGCCAAACAAACCGTTCAAG
TAATTCCTTCCGGTTCTTTGGATTTAGACATTGCACTGGGTATAGGTGGTTATCCGATCGGTAGAATTGTAGAAATTTAC
GGACCTGAGTCTTCTGGAAAAACTACTCTCACACTTTCTGCAATTGCAGAGGCTCAGAAAAGAGGTGGTGTGGCTGCGTT
TATAGATGCAGAACACGCTTTGGATCCATCTTATGCCAAAAAACTTGGGGTCAATATAGACGAACTTTTAGTTTCTCAAC
CGGATAATGGAGAAGAAGCATTAGAAATCTGTGAATCTTTAGTTCGAAGTAATGCAATTGATTTAATCGTAATTGATTCT
GTGGCGGCTTTGGTTCCCAAGGCTGAAATAGAAGGAGATATGGGAGATTCACACATGGGTTTACAAGCAAGACTCATGTC
CCAGGCGCTTAGAAAACTAACTGGTACCATTGCAAAATCCAAAACCGTAGTAATCTTTATCAATCAAATTCGTATGAAAA
TCGGTGTTATGTTCGGTTCTCCTGAAACTACAACTGGCGGAAATGCTTTGAAATTCTATTGTTCAGTTCGTTTGGATATC
CGTAAAATAGAAACGATCAAAGAAAAAGAAGAATCTGTAGGAAACAGAGTACGGGTCAAAGTAGTCAAAAATAAGTGTGC
TCCTCCGTTTAAACAGGCTGAATTTGACATAATCTTTAACGCTGGGATTAGCAGAGAAGGTTCTCTGGTTGACCTAGGTG
TAAAGCATGATATTATTCATAAGGCCGGAGCTTGGTATTCTTACAATACGGAAAAAATTGGCCAAGGTAAGGAGGCCGCT
AAGGAATACTTGAAAAACAACCCTGAAATTGCCTTAACCATCGAAAATATGGTCAGAGATCTAAATTCTCTTCCTTTGTT
AGTTCAGGAAAATAATAAAAAATCTCGTAAAGAGGAAAAATTAGAACAGGCCGCAGGCTAA

Upstream 100 bases:

>100_bases
ACCTAAATTTGTCCGGATCGGGAGCTATATTAAAAAAAGATCGCCGCTTTTAGATACGCGGTGGCATCGCCAAGAACCGT
TAAGGTAGGAGGCAAAAAAT

Downstream 100 bases:

>100_bases
ACAAACTGGCTTTCTTTTTAGGAACCCTTGACCGCCGAATGAGAAATCATTCGGCGTTTTTTTTAGTTACAACATTTTAC
ATAGATTAAAATCTTTCTCT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MGESIMKKAKEDAPSVDDSKKLAIEQAMSQIEKQFGKGSIMKLGSDSAKQTVQVIPSGSLDLDIALGIGGYPIGRIVEIY
GPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEEALEICESLVRSNAIDLIVIDS
VAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAKSKTVVIFINQIRMKIGVMFGSPETTTGGNALKFYCSVRLDI
RKIETIKEKEESVGNRVRVKVVKNKCAPPFKQAEFDIIFNAGISREGSLVDLGVKHDIIHKAGAWYSYNTEKIGQGKEAA
KEYLKNNPEIALTIENMVRDLNSLPLLVQENNKKSRKEEKLEQAAG

Sequences:

>Translated_366_residues
MGESIMKKAKEDAPSVDDSKKLAIEQAMSQIEKQFGKGSIMKLGSDSAKQTVQVIPSGSLDLDIALGIGGYPIGRIVEIY
GPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEEALEICESLVRSNAIDLIVIDS
VAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAKSKTVVIFINQIRMKIGVMFGSPETTTGGNALKFYCSVRLDI
RKIETIKEKEESVGNRVRVKVVKNKCAPPFKQAEFDIIFNAGISREGSLVDLGVKHDIIHKAGAWYSYNTEKIGQGKEAA
KEYLKNNPEIALTIENMVRDLNSLPLLVQENNKKSRKEEKLEQAAG
>Mature_365_residues
GESIMKKAKEDAPSVDDSKKLAIEQAMSQIEKQFGKGSIMKLGSDSAKQTVQVIPSGSLDLDIALGIGGYPIGRIVEIYG
PESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEEALEICESLVRSNAIDLIVIDSV
AALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAKSKTVVIFINQIRMKIGVMFGSPETTTGGNALKFYCSVRLDIR
KIETIKEKEESVGNRVRVKVVKNKCAPPFKQAEFDIIFNAGISREGSLVDLGVKHDIIHKAGAWYSYNTEKIGQGKEAAK
EYLKNNPEIALTIENMVRDLNSLPLLVQENNKKSRKEEKLEQAAG

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=336, Percent_Identity=67.5595238095238, Blast_Score=459, Evalue=1e-130,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_LEPIC (P62217)

Other databases:

- EMBL:   AE016823
- RefSeq:   YP_001697.1
- ProteinModelPortal:   P62217
- SMR:   P62217
- GeneID:   2770206
- GenomeReviews:   AE016823_GR
- KEGG:   lic:LIC11745
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- BioCyc:   LINT-130-01:LINT-130-01-001697-MONOMER
- BioCyc:   LINT267671:LIC_11745-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 39687; Mature: 39556

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGESIMKKAKEDAPSVDDSKKLAIEQAMSQIEKQFGKGSIMKLGSDSAKQTVQVIPSGSL
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHEEEEECCCCC
DLDIALGIGGYPIGRIVEIYGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAK
CEEEEECCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCEEEEEECHHCCCHHHHH
KLGVNIDELLVSQPDNGEEALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMG
HHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHCCHHHCCCCCCCCCCH
LQARLMSQALRKLTGTIAKSKTVVIFINQIRMKIGVMFGSPETTTGGNALKFYCSVRLDI
HHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEHH
RKIETIKEKEESVGNRVRVKVVKNKCAPPFKQAEFDIIFNAGISREGSLVDLGVKHDIIH
HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEECCHHHHHH
KAGAWYSYNTEKIGQGKEAAKEYLKNNPEIALTIENMVRDLNSLPLLVQENNKKSRKEEK
HCCCEEECCHHHHCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEEECCCCHHHHHHH
LEQAAG
HHHHCC
>Mature Secondary Structure 
GESIMKKAKEDAPSVDDSKKLAIEQAMSQIEKQFGKGSIMKLGSDSAKQTVQVIPSGSL
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHEEEEECCCCC
DLDIALGIGGYPIGRIVEIYGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAK
CEEEEECCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCEEEEEECHHCCCHHHHH
KLGVNIDELLVSQPDNGEEALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMG
HHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHCCHHHCCCCCCCCCCH
LQARLMSQALRKLTGTIAKSKTVVIFINQIRMKIGVMFGSPETTTGGNALKFYCSVRLDI
HHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEHH
RKIETIKEKEESVGNRVRVKVVKNKCAPPFKQAEFDIIFNAGISREGSLVDLGVKHDIIH
HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEECCHHHHHH
KAGAWYSYNTEKIGQGKEAAKEYLKNNPEIALTIENMVRDLNSLPLLVQENNKKSRKEEK
HCCCEEECCHHHHCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEEECCCCHHHHHHH
LEQAAG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA