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The map label for this gene is cheD1

Identifier: 45657394

GI number: 45657394

Start: 1880554

End: 1881054

Strand: Reverse

Name: cheD1

Synonym: LIC11521

Alternate gene names: 45657394

Gene position: 1881054-1880554 (Counterclockwise)

Preceding gene: 45657395

Following gene: 45657393

Centisome position: 43.98

GC content: 37.72

Gene sequence:

>501_bases
ATGATATTAGAACCAGATACGGTCATAGACTTGTTTTTACAACCCGGCGGTTTTTATTGGGGAAAAGGAAATATCAGAAT
TAGAACTCTACTCGGTTCCTGTGTTTCAATTTGTTTTTGGCACCCATCCCTTCTCTACGGAGGAATGGCTCACGTTATGC
TCCCTTTTAGACCTTCTTCAATCCATTCCGATGATAGTCTAAATGCGAAGTATGCGGAAGATGCCTTCCAGCTTTTTTTT
GAAAAGTTAGAAGGTTTTAAAAAACAATATCAGATCAAATTATTCGGAGGTGCCTCTATGTTTTCTACAGAAGAGGAAAA
ACTTCTAGAACTCAAATCGGTCCGAGATATTGGAATGAAAAACATTCTTTCTATCAAGGAACACTTAATTAGAAATCAAC
TTCTGATTTCCTCCGAAGACTTAGGGGGATTTTCTCATCGAAGAATTTTTTTTTCTCTTTGGGACGGTGAAATTTATGTA
GAACGGCCCGAACATACATGA

Upstream 100 bases:

>100_bases
ACGGTTTTATTATCATTCTGAATACTGAAAAAATTCTAAATCTGGAAGAACTAACCTCTTTAGAAGAAAATCAGCCTTCT
GAAATTGTTTTAGAAACTAC

Downstream 100 bases:

>100_bases
TTCAAGTTTTTATCGTCGATGATTCTGCGGTAGTTCGCCAGGTTCTTACTCAAATCCTGAACAAAGATCCTGAAATCGAA
ATTATTGGTTTTGCTTCTGA

Product: putative chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MILEPDTVIDLFLQPGGFYWGKGNIRIRTLLGSCVSICFWHPSLLYGGMAHVMLPFRPSSIHSDDSLNAKYAEDAFQLFF
EKLEGFKKQYQIKLFGGASMFSTEEEKLLELKSVRDIGMKNILSIKEHLIRNQLLISSEDLGGFSHRRIFFSLWDGEIYV
ERPEHT

Sequences:

>Translated_166_residues
MILEPDTVIDLFLQPGGFYWGKGNIRIRTLLGSCVSICFWHPSLLYGGMAHVMLPFRPSSIHSDDSLNAKYAEDAFQLFF
EKLEGFKKQYQIKLFGGASMFSTEEEKLLELKSVRDIGMKNILSIKEHLIRNQLLISSEDLGGFSHRRIFFSLWDGEIYV
ERPEHT
>Mature_166_residues
MILEPDTVIDLFLQPGGFYWGKGNIRIRTLLGSCVSICFWHPSLLYGGMAHVMLPFRPSSIHSDDSLNAKYAEDAFQLFF
EKLEGFKKQYQIKLFGGASMFSTEEEKLLELKSVRDIGMKNILSIKEHLIRNQLLISSEDLGGFSHRRIFFSLWDGEIYV
ERPEHT

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED1_LEPIC (Q72S65)

Other databases:

- EMBL:   AE016823
- RefSeq:   YP_001480.1
- HSSP:   Q9X005
- ProteinModelPortal:   Q72S65
- SMR:   Q72S65
- GeneID:   2771146
- GenomeReviews:   AE016823_GR
- KEGG:   lic:LIC11521
- HOGENOM:   HBG531149
- OMA:   RIGGMCH
- ProtClustDB:   CLSK574407
- BioCyc:   LINT267671:LIC_11521-MONOMER
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 19122; Mature: 19122

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILEPDTVIDLFLQPGGFYWGKGNIRIRTLLGSCVSICFWHPSLLYGGMAHVMLPFRPSS
CCCCCCCEEEEEECCCCEEECCCCEEEHHHHHHHHHHHHHCHHHHHCCHHHEEECCCCCC
IHSDDSLNAKYAEDAFQLFFEKLEGFKKQYQIKLFGGASMFSTEEEKLLELKSVRDIGMK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
NILSIKEHLIRNQLLISSEDLGGFSHRRIFFSLWDGEIYVERPEHT
HHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCEEEEECCCCC
>Mature Secondary Structure
MILEPDTVIDLFLQPGGFYWGKGNIRIRTLLGSCVSICFWHPSLLYGGMAHVMLPFRPSS
CCCCCCCEEEEEECCCCEEECCCCEEEHHHHHHHHHHHHHCHHHHHCCHHHEEECCCCCC
IHSDDSLNAKYAEDAFQLFFEKLEGFKKQYQIKLFGGASMFSTEEEKLLELKSVRDIGMK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
NILSIKEHLIRNQLLISSEDLGGFSHRRIFFSLWDGEIYVERPEHT
HHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA