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The map label for this gene is 45657022

Identifier: 45657022

GI number: 45657022

Start: 1403382

End: 1404887

Strand: Reverse

Name: 45657022

Synonym: LIC11138

Alternate gene names: NA

Gene position: 1404887-1403382 (Counterclockwise)

Preceding gene: 45657023

Following gene: 304570489

Centisome position: 32.85

GC content: 33.73

Gene sequence:

>1506_bases
TTGCAAAATCTGGAGATGTTAAAAAAGGAAACCAAATTCTTAGAAGAATTAAATTCTCCTGAGAAAAAAATAGGACTGAG
AGCCACCGCCTACTTTACTTCCAAAGATAAATCAGTTCTCTCTAAAGATTTAAAATCACAACTTACAATCTCGTTAGGTG
AAAATTTTCTAAAAGACCTAGAACAAAACCTGAAGGACAAAATGCTCTCGCCTAACAACCTACTCGTAAAAATGGAATTT
TCTCCTCTTCCCGAAAAAATGCACAGAGAAATTTTTCCTTTTTTTAAACCAGGATCTTATTTAAAAATCCGAGACATCCT
AGAAGGTATTTTATTTTGTCAAATTCTAAGAGAAGAATGGGGATTAAATCAAGAATTAAAAATATTAAATATACAAGAAT
CCTTAAGTACCAAGGAAAAAGAACTTTTAGAAAACTTCAGAGAACAACAAATAAAAGGACTAATACAAACCTTATCCGAT
AAAGATCCAGGTTGGGCTTATAGCGCACTTGTAATCTTAGCTAGATTACACACAATCGAAGAAAGTATCCAAACAGGATC
TCCAGTTTTTTTATCCAGCTTTCCTGACAATTCTCCCATCGTTTACAAAGAAGATTCACAAGACGCGCAAACACTTCAAC
ATTTTTCCGAAGAAACCTGGGCCATAGTTTCACTTGCTCGAAAAAAAATATCCACCTTAAACGAACTTACCGAAAAAGAA
TATCAAATCTGGGAAGATGCATCCAACCGAGCCTTTGAATTTCAAGAAGGGATTCAAACTTCGATTCCAATAAGAGTGAC
ATCTGAAAAATTACTTCCTCAAAGAGAAAACAAATTTCTGATTCCTATGTATTTACCAGAAAGCTCAATACTTAAAGAAT
ACCTAATATTTGCCAGACAAAGAGAAAAAGAATATCATACACGTCTAAAGAAACTTTATCCTTTTCGAATACTCTTCGAA
AACTGTACGACTGAAATTTTAAAAAACGCTCAAAATTCTTTTGACCAAAAAGAAATCAATTTCCCCGGAAAAAAGATAGA
ACTTAATTTTTCGCTCTCCTTTATTCCTTTTTACGCCTCTTATTCCGTTTCCAACAACTGGAATAATGAGGGAGAAAAAA
TCTTACTCTCTTATCGAAGAAAAAAATTGGTAGAACTACTCAAACAAAATCCGAATTTAAAAACTCGTATTTTAGAATCG
TTTACGTTTTCTTCTTCCATCTACAAACCGAATAAAGAAGATCATTTTTTTCCACTTTTTACAGACGACGTTTTTTGGGG
CAGGCCTTTGTACGGAACCGTAAATTTAGCGGCTGGGTTTGGCACGAGTTTGATAGGGATTTTCACACTACCTTTCGACC
AAGGAGAAAAACTTCAAAAAGGATTTCAATCCTTATTCTTTAGTCTTCCAGAATTAGTTTTTTTTAATATTCGAAAAGGA
ACATTTCCTTCCGTTTCCATAAAAGAGATCCCCGAAGAACTTTTTCAGTTTCAAGACGAGGATTAA

Upstream 100 bases:

>100_bases
AAACAGAACTAGCATTCTTACTAGACTCAAACTAAACCCAAAAGAAGTTTCCACATTAGAATCCGGACTCAATCGTCTTT
ATATAGTTCAATTTAGACAT

Downstream 100 bases:

>100_bases
AGACAGAAGACTTTATCCTTGTTTAAAATACCGATTATAATCACTCTTGATCCGCCTCCTGCAACCAGTCTTCAACGTTT
GTCTTCTCTTGAGCTCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MQNLEMLKKETKFLEELNSPEKKIGLRATAYFTSKDKSVLSKDLKSQLTISLGENFLKDLEQNLKDKMLSPNNLLVKMEF
SPLPEKMHREIFPFFKPGSYLKIRDILEGILFCQILREEWGLNQELKILNIQESLSTKEKELLENFREQQIKGLIQTLSD
KDPGWAYSALVILARLHTIEESIQTGSPVFLSSFPDNSPIVYKEDSQDAQTLQHFSEETWAIVSLARKKISTLNELTEKE
YQIWEDASNRAFEFQEGIQTSIPIRVTSEKLLPQRENKFLIPMYLPESSILKEYLIFARQREKEYHTRLKKLYPFRILFE
NCTTEILKNAQNSFDQKEINFPGKKIELNFSLSFIPFYASYSVSNNWNNEGEKILLSYRRKKLVELLKQNPNLKTRILES
FTFSSSIYKPNKEDHFFPLFTDDVFWGRPLYGTVNLAAGFGTSLIGIFTLPFDQGEKLQKGFQSLFFSLPELVFFNIRKG
TFPSVSIKEIPEELFQFQDED

Sequences:

>Translated_501_residues
MQNLEMLKKETKFLEELNSPEKKIGLRATAYFTSKDKSVLSKDLKSQLTISLGENFLKDLEQNLKDKMLSPNNLLVKMEF
SPLPEKMHREIFPFFKPGSYLKIRDILEGILFCQILREEWGLNQELKILNIQESLSTKEKELLENFREQQIKGLIQTLSD
KDPGWAYSALVILARLHTIEESIQTGSPVFLSSFPDNSPIVYKEDSQDAQTLQHFSEETWAIVSLARKKISTLNELTEKE
YQIWEDASNRAFEFQEGIQTSIPIRVTSEKLLPQRENKFLIPMYLPESSILKEYLIFARQREKEYHTRLKKLYPFRILFE
NCTTEILKNAQNSFDQKEINFPGKKIELNFSLSFIPFYASYSVSNNWNNEGEKILLSYRRKKLVELLKQNPNLKTRILES
FTFSSSIYKPNKEDHFFPLFTDDVFWGRPLYGTVNLAAGFGTSLIGIFTLPFDQGEKLQKGFQSLFFSLPELVFFNIRKG
TFPSVSIKEIPEELFQFQDED
>Mature_501_residues
MQNLEMLKKETKFLEELNSPEKKIGLRATAYFTSKDKSVLSKDLKSQLTISLGENFLKDLEQNLKDKMLSPNNLLVKMEF
SPLPEKMHREIFPFFKPGSYLKIRDILEGILFCQILREEWGLNQELKILNIQESLSTKEKELLENFREQQIKGLIQTLSD
KDPGWAYSALVILARLHTIEESIQTGSPVFLSSFPDNSPIVYKEDSQDAQTLQHFSEETWAIVSLARKKISTLNELTEKE
YQIWEDASNRAFEFQEGIQTSIPIRVTSEKLLPQRENKFLIPMYLPESSILKEYLIFARQREKEYHTRLKKLYPFRILFE
NCTTEILKNAQNSFDQKEINFPGKKIELNFSLSFIPFYASYSVSNNWNNEGEKILLSYRRKKLVELLKQNPNLKTRILES
FTFSSSIYKPNKEDHFFPLFTDDVFWGRPLYGTVNLAAGFGTSLIGIFTLPFDQGEKLQKGFQSLFFSLPELVFFNIRKG
TFPSVSIKEIPEELFQFQDED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58499; Mature: 58499

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00422 GRANINS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLEMLKKETKFLEELNSPEKKIGLRATAYFTSKDKSVLSKDLKSQLTISLGENFLKDL
CCCHHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQNLKDKMLSPNNLLVKMEFSPLPEKMHREIFPFFKPGSYLKIRDILEGILFCQILREEW
HHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
GLNQELKILNIQESLSTKEKELLENFREQQIKGLIQTLSDKDPGWAYSALVILARLHTIE
CCCCCEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ESIQTGSPVFLSSFPDNSPIVYKEDSQDAQTLQHFSEETWAIVSLARKKISTLNELTEKE
HHHHCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQIWEDASNRAFEFQEGIQTSIPIRVTSEKLLPQRENKFLIPMYLPESSILKEYLIFARQ
HHHHHCCCCCCCHHHHCCCCCCCEEECHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHH
REKEYHTRLKKLYPFRILFENCTTEILKNAQNSFDQKEINFPGKKIELNFSLSFIPFYAS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEEEE
YSVSNNWNNEGEKILLSYRRKKLVELLKQNPNLKTRILESFTFSSSIYKPNKEDHFFPLF
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEE
TDDVFWGRPLYGTVNLAAGFGTSLIGIFTLPFDQGEKLQKGFQSLFFSLPELVFFNIRKG
ECCCCCCCCCCEEEEEHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCC
TFPSVSIKEIPEELFQFQDED
CCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQNLEMLKKETKFLEELNSPEKKIGLRATAYFTSKDKSVLSKDLKSQLTISLGENFLKDL
CCCHHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQNLKDKMLSPNNLLVKMEFSPLPEKMHREIFPFFKPGSYLKIRDILEGILFCQILREEW
HHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
GLNQELKILNIQESLSTKEKELLENFREQQIKGLIQTLSDKDPGWAYSALVILARLHTIE
CCCCCEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ESIQTGSPVFLSSFPDNSPIVYKEDSQDAQTLQHFSEETWAIVSLARKKISTLNELTEKE
HHHHCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQIWEDASNRAFEFQEGIQTSIPIRVTSEKLLPQRENKFLIPMYLPESSILKEYLIFARQ
HHHHHCCCCCCCHHHHCCCCCCCEEECHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHH
REKEYHTRLKKLYPFRILFENCTTEILKNAQNSFDQKEINFPGKKIELNFSLSFIPFYAS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEEEE
YSVSNNWNNEGEKILLSYRRKKLVELLKQNPNLKTRILESFTFSSSIYKPNKEDHFFPLF
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEE
TDDVFWGRPLYGTVNLAAGFGTSLIGIFTLPFDQGEKLQKGFQSLFFSLPELVFFNIRKG
ECCCCCCCCCCEEEEEHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCC
TFPSVSIKEIPEELFQFQDED
CCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA