Click here to switch to the map view.

The map label for this gene is plsC

Identifier: 45656990

GI number: 45656990

Start: 1366973

End: 1367770

Strand: Reverse

Name: plsC

Synonym: LIC11106

Alternate gene names: NA

Gene position: 1367770-1366973 (Counterclockwise)

Preceding gene: 45656994

Following gene: 45656989

Centisome position: 31.98

GC content: 40.73

Gene sequence:

>798_bases
ATGGAAAACCAATCTGACCCTCTTGACAGCCTATTCTTAATTCCCAGAGAACCGGTAAAACAATTTCTTAAAACACTTCT
TCACCTAGTATATTCGGTGGAAGTTTCCGGAATCGAAAACATTCCCGAAACCGGCGGAGCTGTTTTGATTTCTAATCACA
CGGACAATCTAGATGTGATCATACAAGGAACCTCCGTTTTAAGAAAAGTGATTTATCTAGGAAAATACGAATTGTTTCAT
CCTCAAGAAACCGTTTTAGAAATCTTAAATAGCCCATCCTCTCCTTTGAATTCTTTCCCTCTGAGTTTGATCAGACAATC
CCTAGTGTCCGCTCTAAACACTTTAGGAGATCTCCAAGGCAAACAACTCATGCACTGGGGAGGCCATCCCATTTTAAGAG
CGCATAACGTTAAAGATGCGAAGTCAGCTGCAGCCTATTATGAAGACCTTGAAAATTATATGGTGGAACTGATCCAAAAA
GGAGAACTCATTTCGGTGTATCCCCAAGGAACACGAACCGAAACCGTTCTTCCCGGTTCTTTCAAAGCGCTTTCTGCTAA
ACTAGCAATCAGAGCTGGAGTTCCAATCATTCCAAGCGGAATTAAAGGGGCCTGGAGAATGTTAAAACCAGAAGCATTTA
TTTCTGGGAAAGCATTTGGAGCCAAAATTACGTATAACATTGGTAAGCCGATCTATCCACACGAGTTTCCCAAAGAACCT
CTTAAAAAAGCTGCAAAAATTGTTACGGAAGAATTAGAAAATCGAGTTAGGAAACTGATAGAAGCCCCGGAAAATTAA

Upstream 100 bases:

>100_bases
AACATTCTAAAAATCCAACTTGATGAATTCGATTCCTTTCCGTAGAATGATTTCTAAATCCTATATTGATTGAACACACG
TTCGAAAAGCAGAACCTCGC

Downstream 100 bases:

>100_bases
AATTGTTTTTTTGAATATTAGAATAGTAGAATTTATATGGAAACTCAAATTTACACTCCTAAACACAAGGTTCGTTTTAT
TACGGCGGCTTCTCTTTTTG

Product: acyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MENQSDPLDSLFLIPREPVKQFLKTLLHLVYSVEVSGIENIPETGGAVLISNHTDNLDVIIQGTSVLRKVIYLGKYELFH
PQETVLEILNSPSSPLNSFPLSLIRQSLVSALNTLGDLQGKQLMHWGGHPILRAHNVKDAKSAAAYYEDLENYMVELIQK
GELISVYPQGTRTETVLPGSFKALSAKLAIRAGVPIIPSGIKGAWRMLKPEAFISGKAFGAKITYNIGKPIYPHEFPKEP
LKKAAKIVTEELENRVRKLIEAPEN

Sequences:

>Translated_265_residues
MENQSDPLDSLFLIPREPVKQFLKTLLHLVYSVEVSGIENIPETGGAVLISNHTDNLDVIIQGTSVLRKVIYLGKYELFH
PQETVLEILNSPSSPLNSFPLSLIRQSLVSALNTLGDLQGKQLMHWGGHPILRAHNVKDAKSAAAYYEDLENYMVELIQK
GELISVYPQGTRTETVLPGSFKALSAKLAIRAGVPIIPSGIKGAWRMLKPEAFISGKAFGAKITYNIGKPIYPHEFPKEP
LKKAAKIVTEELENRVRKLIEAPEN
>Mature_265_residues
MENQSDPLDSLFLIPREPVKQFLKTLLHLVYSVEVSGIENIPETGGAVLISNHTDNLDVIIQGTSVLRKVIYLGKYELFH
PQETVLEILNSPSSPLNSFPLSLIRQSLVSALNTLGDLQGKQLMHWGGHPILRAHNVKDAKSAAAYYEDLENYMVELIQK
GELISVYPQGTRTETVLPGSFKALSAKLAIRAGVPIIPSGIKGAWRMLKPEAFISGKAFGAKITYNIGKPIYPHEFPKEP
LKKAAKIVTEELENRVRKLIEAPEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29357; Mature: 29357

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQSDPLDSLFLIPREPVKQFLKTLLHLVYSVEVSGIENIPETGGAVLISNHTDNLDVI
CCCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEE
IQGTSVLRKVIYLGKYELFHPQETVLEILNSPSSPLNSFPLSLIRQSLVSALNTLGDLQG
EECHHHHHHHHHHCCCCEECCHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCC
KQLMHWGGHPILRAHNVKDAKSAAAYYEDLENYMVELIQKGELISVYPQGTRTETVLPGS
CHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEECCCC
FKALSAKLAIRAGVPIIPSGIKGAWRMLKPEAFISGKAFGAKITYNIGKPIYPHEFPKEP
HHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHCCCCCCCEEEEEECCCCCCCCCCCHHH
LKKAAKIVTEELENRVRKLIEAPEN
HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MENQSDPLDSLFLIPREPVKQFLKTLLHLVYSVEVSGIENIPETGGAVLISNHTDNLDVI
CCCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEE
IQGTSVLRKVIYLGKYELFHPQETVLEILNSPSSPLNSFPLSLIRQSLVSALNTLGDLQG
EECHHHHHHHHHHCCCCEECCHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCC
KQLMHWGGHPILRAHNVKDAKSAAAYYEDLENYMVELIQKGELISVYPQGTRTETVLPGS
CHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEECCCC
FKALSAKLAIRAGVPIIPSGIKGAWRMLKPEAFISGKAFGAKITYNIGKPIYPHEFPKEP
HHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHCCCCCCCEEEEEECCCCCCCCCCCHHH
LKKAAKIVTEELENRVRKLIEAPEN
HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA