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The map label for this gene is 45656951

Identifier: 45656951

GI number: 45656951

Start: 1319626

End: 1319946

Strand: Reverse

Name: 45656951

Synonym: LIC11067

Alternate gene names: NA

Gene position: 1319946-1319626 (Counterclockwise)

Preceding gene: 45656952

Following gene: 45656950

Centisome position: 30.86

GC content: 38.32

Gene sequence:

>321_bases
ATGAGCGACGAACAAATAGATACAGTTATCGGAGACGATATTCATTTTAGAGGAAAATTGAAATTCAATAATTCCCTGAA
AATCAAAGGTAATTTTAAAGGTACCATCGAAACTACCGGAAAACTTGTAGTAGGAGATACAGGAGAAGTGGAAGCTGATA
TCCAGACAGGAACTTTGGAAGTAGAAGGAAATCTAAAAGGAAACGTTTCCGCAAATCAAAAAGTAGCCATTCGAAAAACA
GGAAAAGTAATCGGTGATATCCGCACACCCGATTTAGAAATCGAATCCGGAGCGAAATTTAGCGGAAACAGCGCTATGTA
G

Upstream 100 bases:

>100_bases
TGACCTGTAAAACGAACCTATTACGACGAACTTAAAGCTATTTTAAAAATCGTAAAAAATATTTGAAACTACCTATCCAA
CCCGAAAACTTGGAGCCAGT

Downstream 100 bases:

>100_bases
TAATGATTCAACCCTCCCCTTTTTCACACGGCCCAGGCTTAAAGGAGTTACATCCTGCGGGCTTGCGTCCACATTTTAGT
CCGCTTCAACATAGATTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSDEQIDTVIGDDIHFRGKLKFNNSLKIKGNFKGTIETTGKLVVGDTGEVEADIQTGTLEVEGNLKGNVSANQKVAIRKT
GKVIGDIRTPDLEIESGAKFSGNSAM

Sequences:

>Translated_106_residues
MSDEQIDTVIGDDIHFRGKLKFNNSLKIKGNFKGTIETTGKLVVGDTGEVEADIQTGTLEVEGNLKGNVSANQKVAIRKT
GKVIGDIRTPDLEIESGAKFSGNSAM
>Mature_105_residues
SDEQIDTVIGDDIHFRGKLKFNNSLKIKGNFKGTIETTGKLVVGDTGEVEADIQTGTLEVEGNLKGNVSANQKVAIRKTG
KVIGDIRTPDLEIESGAKFSGNSAM

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11309; Mature: 11178

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEQIDTVIGDDIHFRGKLKFNNSLKIKGNFKGTIETTGKLVVGDTGEVEADIQTGTLE
CCCCCCEEEECCCEEEEEEEEECCEEEEEECCCEEEEECCEEEECCCCCEEEEEEECEEE
VEGNLKGNVSANQKVAIRKTGKVIGDIRTPDLEIESGAKFSGNSAM
ECCCCCCCCCCCCEEEEEECCCEEECCCCCCEEECCCCEECCCCCC
>Mature Secondary Structure 
SDEQIDTVIGDDIHFRGKLKFNNSLKIKGNFKGTIETTGKLVVGDTGEVEADIQTGTLE
CCCCCEEEECCCEEEEEEEEECCEEEEEECCCEEEEECCEEEECCCCCEEEEEEECEEE
VEGNLKGNVSANQKVAIRKTGKVIGDIRTPDLEIESGAKFSGNSAM
ECCCCCCCCCCCCEEEEEECCCEEECCCCCCEEECCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA