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The map label for this gene is recJ

Identifier: 45656950

GI number: 45656950

Start: 1317692

End: 1319623

Strand: Reverse

Name: recJ

Synonym: LIC11066

Alternate gene names: 45656950

Gene position: 1319623-1317692 (Counterclockwise)

Preceding gene: 45656951

Following gene: 45656948

Centisome position: 30.85

GC content: 37.42

Gene sequence:

>1932_bases
ATGATTCAACCCTCCCCTTTTTCACACGGCCCAGGCTTAAAGGAGTTACATCCTGCGGGCTTGCGTCCACATTTTAGTCC
GCTTCAACATAGATTCTACGAAACACATCTGCGGGAAAAATCTCATCCAGAACATCTTCTCTATCACGGTCTTAGAGAAC
TTCCCTCTCCTTTTTTACTCCCGGATTTAGAACCCGCTTTAGATCTTTTAAAAGAATTCATTCAAAAAGAAAAAAAGATC
CTTCTATTCGGAGACAGAGATTGTGATGGTGTATCTTCCACAAGTTTACTCGGAAGTTTTTTAAAAAAGATTCATCGAGG
GGAACTGATCCTTAAAACCTCAAACGAAGAAGACTATGGTCTTTGTCCTGCGGCACTTGACTTTGTTAAAAGAATCAAAC
CGGATCTTTTAATCACTCTTGATTTTGGTACTACAAATCACATCCAGATTGATGAACTTGCATCCATAGGAATCAAGGTT
ATAGTTTTAGATCATCATGAAATCCCCGAAAGAATTCCGGACTGTTATCTTATTTCTCCAAAACGTTCAGATTCTATCTA
CCCCAATGAAAAAATCTGCACTTCCGTTTTGGCTTTAAAGTTTATTCAGGCCTATCTTTATTCTTCTTTAGAAGAATACA
ACCGCGCGACCTGGATCGGAGATGGTAATTCCTTATTTTCAGGTTTTCTTATATACCGTGGTAAACTTCTTTTTCAAGGT
GATCGACAAGAAGCGGAATCTAAATTTTCTCTTACTATCCACGATGAAAGTTATTCTTTCCAATCTTCTTATCCAGAAAG
AGAATGGTTTTATCAGGAATTTCTAAAATACCCTGCAATCTTAGAACAATACCTTCAAAATTTCGACTTGGCTTCCATTG
GAACCGTTTCCGATATGATGCCTTTATATGGTGAAAATAGAATCATCGTTAGAGAAGGTTGTAAAATTCTTTTCAAACTT
CATAAAAAGGAAACTTCACACAGAGAAGGTCTTTTCCAACTTTTACAACTCATGGAATTTGCAGATAATCGTGTTACTTC
AAAAGATTTAGGTTGGGGACTAGGTCCCATGATCAATTCCGCCGGAAGAATGAATCGTACAGACGTAGCACTGAATCTTT
TGTTAGAAGAAAATCCAGAACTTGCAAAGTCGGGCGCCAAAGAACTTCAAAAACTAAACGAAGAAAGAAAAGAAAGAACG
AAAAGAAATATCTTCAAAGTGGATAGTTTTTTAAAAAGAAAAAAAGAGAGAACCGAAAGATCAGTTCTTTTCTGTTATGA
ACCGGACTTTGAACCGGGAGTTTCTGGTATCGTCGCCACAAGGCTTGTAGAAGAATACAAAAGGCCGGTTTTATTTATCA
CCCCCGATCACGGTCACGCTAAGGGAAGTATTCGTGCCTATGGCAAAGAAAACGTATTAAACCTTCTTAAAAAAGCTGAA
TCTGTTTTTTTGCAATTTGGAGGACACAAAGAAGCAGGTGGTTTTTCATTAGAAATAGATAAAATACCAGAACTTGCCAA
GTTGATCTTTGATAACGCGGACAACTGGCTGGCAGAAGAACAAATGACTTCTACTTCGGAACAAACTGAAAGTCTGATTT
CCTTAAAGCCAGAAGAATTGAACCCTAAAATTTTTCAGGAACTTTCTATCTTTGAACCATTCGGCCATGAAAACCCAATT
CCATTATACTCAATCAAAAATGCTAAGATCTATCATACAAAACCGATGACGGATGGAAAACACGTTCGTTTTAGAATTTT
AGGTGCGCCAGAATCGATCCAATGTTTGATTTGGAATCGCGGAAAAGATTTTTTAGAACTGATTAGTAAGTCGGTAAGTC
TGGATCTATGGGGTTCTTTGGAAGAATCTACCTTTCGCTCCAAAACTTCTCTTCAATTCATAGTAAACTACTTTCAAGAA
TCGGAAAATTAA

Upstream 100 bases:

>100_bases
TAGCCATTCGAAAAACAGGAAAAGTAATCGGTGATATCCGCACACCCGATTTAGAAATCGAATCCGGAGCGAAATTTAGC
GGAAACAGCGCTATGTAGTA

Downstream 100 bases:

>100_bases
TTCCAAATTTGTGTGAGTTCCCACATTTTCAAAGTTAGTCTGTTAAACTCCGATTTGTGGAAGTTCCCACAGTTTCAAAG
TTAGTCTGTTAAACTCCGAT

Product: single-stranded DNA exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 643; Mature: 643

Protein sequence:

>643_residues
MIQPSPFSHGPGLKELHPAGLRPHFSPLQHRFYETHLREKSHPEHLLYHGLRELPSPFLLPDLEPALDLLKEFIQKEKKI
LLFGDRDCDGVSSTSLLGSFLKKIHRGELILKTSNEEDYGLCPAALDFVKRIKPDLLITLDFGTTNHIQIDELASIGIKV
IVLDHHEIPERIPDCYLISPKRSDSIYPNEKICTSVLALKFIQAYLYSSLEEYNRATWIGDGNSLFSGFLIYRGKLLFQG
DRQEAESKFSLTIHDESYSFQSSYPEREWFYQEFLKYPAILEQYLQNFDLASIGTVSDMMPLYGENRIIVREGCKILFKL
HKKETSHREGLFQLLQLMEFADNRVTSKDLGWGLGPMINSAGRMNRTDVALNLLLEENPELAKSGAKELQKLNEERKERT
KRNIFKVDSFLKRKKERTERSVLFCYEPDFEPGVSGIVATRLVEEYKRPVLFITPDHGHAKGSIRAYGKENVLNLLKKAE
SVFLQFGGHKEAGGFSLEIDKIPELAKLIFDNADNWLAEEQMTSTSEQTESLISLKPEELNPKIFQELSIFEPFGHENPI
PLYSIKNAKIYHTKPMTDGKHVRFRILGAPESIQCLIWNRGKDFLELISKSVSLDLWGSLEESTFRSKTSLQFIVNYFQE
SEN

Sequences:

>Translated_643_residues
MIQPSPFSHGPGLKELHPAGLRPHFSPLQHRFYETHLREKSHPEHLLYHGLRELPSPFLLPDLEPALDLLKEFIQKEKKI
LLFGDRDCDGVSSTSLLGSFLKKIHRGELILKTSNEEDYGLCPAALDFVKRIKPDLLITLDFGTTNHIQIDELASIGIKV
IVLDHHEIPERIPDCYLISPKRSDSIYPNEKICTSVLALKFIQAYLYSSLEEYNRATWIGDGNSLFSGFLIYRGKLLFQG
DRQEAESKFSLTIHDESYSFQSSYPEREWFYQEFLKYPAILEQYLQNFDLASIGTVSDMMPLYGENRIIVREGCKILFKL
HKKETSHREGLFQLLQLMEFADNRVTSKDLGWGLGPMINSAGRMNRTDVALNLLLEENPELAKSGAKELQKLNEERKERT
KRNIFKVDSFLKRKKERTERSVLFCYEPDFEPGVSGIVATRLVEEYKRPVLFITPDHGHAKGSIRAYGKENVLNLLKKAE
SVFLQFGGHKEAGGFSLEIDKIPELAKLIFDNADNWLAEEQMTSTSEQTESLISLKPEELNPKIFQELSIFEPFGHENPI
PLYSIKNAKIYHTKPMTDGKHVRFRILGAPESIQCLIWNRGKDFLELISKSVSLDLWGSLEESTFRSKTSLQFIVNYFQE
SEN
>Mature_643_residues
MIQPSPFSHGPGLKELHPAGLRPHFSPLQHRFYETHLREKSHPEHLLYHGLRELPSPFLLPDLEPALDLLKEFIQKEKKI
LLFGDRDCDGVSSTSLLGSFLKKIHRGELILKTSNEEDYGLCPAALDFVKRIKPDLLITLDFGTTNHIQIDELASIGIKV
IVLDHHEIPERIPDCYLISPKRSDSIYPNEKICTSVLALKFIQAYLYSSLEEYNRATWIGDGNSLFSGFLIYRGKLLFQG
DRQEAESKFSLTIHDESYSFQSSYPEREWFYQEFLKYPAILEQYLQNFDLASIGTVSDMMPLYGENRIIVREGCKILFKL
HKKETSHREGLFQLLQLMEFADNRVTSKDLGWGLGPMINSAGRMNRTDVALNLLLEENPELAKSGAKELQKLNEERKERT
KRNIFKVDSFLKRKKERTERSVLFCYEPDFEPGVSGIVATRLVEEYKRPVLFITPDHGHAKGSIRAYGKENVLNLLKKAE
SVFLQFGGHKEAGGFSLEIDKIPELAKLIFDNADNWLAEEQMTSTSEQTESLISLKPEELNPKIFQELSIFEPFGHENPI
PLYSIKNAKIYHTKPMTDGKHVRFRILGAPESIQCLIWNRGKDFLELISKSVSLDLWGSLEESTFRSKTSLQFIVNYFQE
SEN

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=600, Percent_Identity=25.3333333333333, Blast_Score=169, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 73882; Mature: 73882

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQPSPFSHGPGLKELHPAGLRPHFSPLQHRFYETHLREKSHPEHLLYHGLRELPSPFLL
CCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
PDLEPALDLLKEFIQKEKKILLFGDRDCDGVSSTSLLGSFLKKIHRGELILKTSNEEDYG
CCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCC
LCPAALDFVKRIKPDLLITLDFGTTNHIQIDELASIGIKVIVLDHHEIPERIPDCYLISP
CCHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHCCEEEEEECCCHHHHHCCCCEEECC
KRSDSIYPNEKICTSVLALKFIQAYLYSSLEEYNRATWIGDGNSLFSGFLIYRGKLLFQG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCEEEEEC
DRQEAESKFSLTIHDESYSFQSSYPEREWFYQEFLKYPAILEQYLQNFDLASIGTVSDMM
CHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
PLYGENRIIVREGCKILFKLHKKETSHREGLFQLLQLMEFADNRVTSKDLGWGLGPMINS
HHHCCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHC
AGRMNRTDVALNLLLEENPELAKSGAKELQKLNEERKERTKRNIFKVDSFLKRKKERTER
CCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SVLFCYEPDFEPGVSGIVATRLVEEYKRPVLFITPDHGHAKGSIRAYGKENVLNLLKKAE
CEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCHHHHHHHHHHHH
SVFLQFGGHKEAGGFSLEIDKIPELAKLIFDNADNWLAEEQMTSTSEQTESLISLKPEEL
HHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCHHC
NPKIFQELSIFEPFGHENPIPLYSIKNAKIYHTKPMTDGKHVRFRILGAPESIQCLIWNR
CHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEEECCCCCEEEEEECC
GKDFLELISKSVSLDLWGSLEESTFRSKTSLQFIVNYFQESEN
CHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQPSPFSHGPGLKELHPAGLRPHFSPLQHRFYETHLREKSHPEHLLYHGLRELPSPFLL
CCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
PDLEPALDLLKEFIQKEKKILLFGDRDCDGVSSTSLLGSFLKKIHRGELILKTSNEEDYG
CCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCC
LCPAALDFVKRIKPDLLITLDFGTTNHIQIDELASIGIKVIVLDHHEIPERIPDCYLISP
CCHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHCCEEEEEECCCHHHHHCCCCEEECC
KRSDSIYPNEKICTSVLALKFIQAYLYSSLEEYNRATWIGDGNSLFSGFLIYRGKLLFQG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCEEEEEC
DRQEAESKFSLTIHDESYSFQSSYPEREWFYQEFLKYPAILEQYLQNFDLASIGTVSDMM
CHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
PLYGENRIIVREGCKILFKLHKKETSHREGLFQLLQLMEFADNRVTSKDLGWGLGPMINS
HHHCCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHC
AGRMNRTDVALNLLLEENPELAKSGAKELQKLNEERKERTKRNIFKVDSFLKRKKERTER
CCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SVLFCYEPDFEPGVSGIVATRLVEEYKRPVLFITPDHGHAKGSIRAYGKENVLNLLKKAE
CEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCHHHHHHHHHHHH
SVFLQFGGHKEAGGFSLEIDKIPELAKLIFDNADNWLAEEQMTSTSEQTESLISLKPEEL
HHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCHHC
NPKIFQELSIFEPFGHENPIPLYSIKNAKIYHTKPMTDGKHVRFRILGAPESIQCLIWNR
CHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEEECCCCCEEEEEECC
GKDFLELISKSVSLDLWGSLEESTFRSKTSLQFIVNYFQESEN
CHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]