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The map label for this gene is 45656940

Identifier: 45656940

GI number: 45656940

Start: 1301205

End: 1301768

Strand: Reverse

Name: 45656940

Synonym: LIC11056

Alternate gene names: NA

Gene position: 1301768-1301205 (Counterclockwise)

Preceding gene: 45656941

Following gene: 45656939

Centisome position: 30.44

GC content: 31.74

Gene sequence:

>564_bases
ATGATAAATCAATATACAAACAAAAAAGCCACCATTCTAAGAATTTGGAATCATACCTTAGAATCCGTTCTGTCCTTTTT
CTATTTTTCACAAAGTAAACCCAAGTCCTATCGTTTTAAAAAATATTTTAGCACAGAAGATTTAGAAAAAATAGAATCTG
CGGTTTCCAAATCGGAAATTCTCCATAAAGGTGAAATCAAAGTCATTTTAGAAAGTGGTCTTTCGATTTTCAGAATAATC
GAAGGACTTACTACAAAACAAAGAGCCGAAGAATTATTTTCACAAAAAAGAATTTGGGACACGGAAGAAAATACAGGAAT
TTTAATATATATTCAATTGATAGACCGTAAGATCGAACTACTAGCGGATCGAGGAATTTATAAAAAAATAGGTCAAGGAA
AGTTAGACGAAATTTGTCAACGAATGGAAGCCGGATTCAGAGAGGGGCATTACCTAGAAAGTATTCTTTTTGCAATTGAG
GAATTTACACTTCTCCTTCAAAAATATTTTCCTTCTGTAGAACAAAATCCAAACGAATTATCAGACAAACCAGAAGTAAT
TTAA

Upstream 100 bases:

>100_bases
TAGCGGTTCAAGTTCAAGCGGAGGAAGTTCCTGGAGTGGTGGTGGAGGTAGTTCGGGGGGCGGAGGGGCTTCGGGAAGTT
GGTAAAGAATATTTAATATT

Downstream 100 bases:

>100_bases
ACTTTTAAGCTGATAATTTTTTGATTTGATTCTAAAAAATTCGGAGGAACTATAACATATGCTCGTTTTTATATGTCTAT
TCGTTTTGTTTGGAATTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MINQYTNKKATILRIWNHTLESVLSFFYFSQSKPKSYRFKKYFSTEDLEKIESAVSKSEILHKGEIKVILESGLSIFRII
EGLTTKQRAEELFSQKRIWDTEENTGILIYIQLIDRKIELLADRGIYKKIGQGKLDEICQRMEAGFREGHYLESILFAIE
EFTLLLQKYFPSVEQNPNELSDKPEVI

Sequences:

>Translated_187_residues
MINQYTNKKATILRIWNHTLESVLSFFYFSQSKPKSYRFKKYFSTEDLEKIESAVSKSEILHKGEIKVILESGLSIFRII
EGLTTKQRAEELFSQKRIWDTEENTGILIYIQLIDRKIELLADRGIYKKIGQGKLDEICQRMEAGFREGHYLESILFAIE
EFTLLLQKYFPSVEQNPNELSDKPEVI
>Mature_187_residues
MINQYTNKKATILRIWNHTLESVLSFFYFSQSKPKSYRFKKYFSTEDLEKIESAVSKSEILHKGEIKVILESGLSIFRII
EGLTTKQRAEELFSQKRIWDTEENTGILIYIQLIDRKIELLADRGIYKKIGQGKLDEICQRMEAGFREGHYLESILFAIE
EFTLLLQKYFPSVEQNPNELSDKPEVI

Specific function: Unknown

COG id: COG3762

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21967; Mature: 21967

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQYTNKKATILRIWNHTLESVLSFFYFSQSKPKSYRFKKYFSTEDLEKIESAVSKSEI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
LHKGEIKVILESGLSIFRIIEGLTTKQRAEELFSQKRIWDTEENTGILIYIQLIDRKIEL
HHCCCHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHH
LADRGIYKKIGQGKLDEICQRMEAGFREGHYLESILFAIEEFTLLLQKYFPSVEQNPNEL
HHHCCHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SDKPEVI
CCCCCCC
>Mature Secondary Structure
MINQYTNKKATILRIWNHTLESVLSFFYFSQSKPKSYRFKKYFSTEDLEKIESAVSKSEI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
LHKGEIKVILESGLSIFRIIEGLTTKQRAEELFSQKRIWDTEENTGILIYIQLIDRKIEL
HHCCCHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHH
LADRGIYKKIGQGKLDEICQRMEAGFREGHYLESILFAIEEFTLLLQKYFPSVEQNPNEL
HHHCCHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SDKPEVI
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA