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The map label for this gene is 45656713

Identifier: 45656713

GI number: 45656713

Start: 993739

End: 994362

Strand: Reverse

Name: 45656713

Synonym: LIC10822

Alternate gene names: NA

Gene position: 994362-993739 (Counterclockwise)

Preceding gene: 45656714

Following gene: 45656712

Centisome position: 23.25

GC content: 32.05

Gene sequence:

>624_bases
ATGAAATCTATATTTCAAATCTTTATATATTCTATTCTTCTAATGTTGATCCTTTTGACTAAAGATTCTTTTCCAGACGA
AATGTCGGGAGGTCACGAAAACGCTAAAATGTTTATCGAAGAAAAAAGATACATAGAAGCGGAAAAGTTAGCCATTTCTT
TACTTACTAACAATCCTTCTGATGTAACCGCTGAATATATTCTTACTTCTGCTTGGGTTGGTTTAGGTAGGGAAGAAGCT
AAAAAAGGAAACCTTGATAAAGCAATCGAACTTTTACAAAAAGCACGTCAAAAATGGCCCTTTGATCAGGACTTAAAAAA
AGAAATTGAACTACTGGGAAATATTTCTTCTAAAAAAAATATTCTATCTAACTCTTCTCAAAATCGTAGATCCAACGGCT
CACAAACCGTCATCCTTTTAGATTCAGAATTATTTCGTTCCATCGATGATCTAAAGTCGGAACTCCATTCTACAATTGTT
AGTCTCAAAGATACTCATTCCTACAACAAAAAACAAGAATCCTTTTCTAAAAAAGAAATACTCTTTCTTGGTTTGATTTT
GATCTTTACGTTGGTTTCTTTTTGTAATCTTTATTTCACTTTTCTTTTGTGGAAGAGGAGATAA

Upstream 100 bases:

>100_bases
TTCAAAACCCAATTGCCAGTAATTGGTCTTTAGATTCTCTTAAAATGCCTCGGGCTCGTTATGCTCACAAAGTAATTCGT
ATCGACAGGTAAAAAACTAT

Downstream 100 bases:

>100_bases
TAGTTTTATACTAAGAACTTGTCCCAAAACCTGTCAAGGCCCATAGAAGCGAAACGCTGAGTTTCATAAAATGTGGGAAC
TACCACATTTTATAAAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKSIFQIFIYSILLMLILLTKDSFPDEMSGGHENAKMFIEEKRYIEAEKLAISLLTNNPSDVTAEYILTSAWVGLGREEA
KKGNLDKAIELLQKARQKWPFDQDLKKEIELLGNISSKKNILSNSSQNRRSNGSQTVILLDSELFRSIDDLKSELHSTIV
SLKDTHSYNKKQESFSKKEILFLGLILIFTLVSFCNLYFTFLLWKRR

Sequences:

>Translated_207_residues
MKSIFQIFIYSILLMLILLTKDSFPDEMSGGHENAKMFIEEKRYIEAEKLAISLLTNNPSDVTAEYILTSAWVGLGREEA
KKGNLDKAIELLQKARQKWPFDQDLKKEIELLGNISSKKNILSNSSQNRRSNGSQTVILLDSELFRSIDDLKSELHSTIV
SLKDTHSYNKKQESFSKKEILFLGLILIFTLVSFCNLYFTFLLWKRR
>Mature_207_residues
MKSIFQIFIYSILLMLILLTKDSFPDEMSGGHENAKMFIEEKRYIEAEKLAISLLTNNPSDVTAEYILTSAWVGLGREEA
KKGNLDKAIELLQKARQKWPFDQDLKKEIELLGNISSKKNILSNSSQNRRSNGSQTVILLDSELFRSIDDLKSELHSTIV
SLKDTHSYNKKQESFSKKEILFLGLILIFTLVSFCNLYFTFLLWKRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23891; Mature: 23891

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIFQIFIYSILLMLILLTKDSFPDEMSGGHENAKMFIEEKRYIEAEKLAISLLTNNPS
CHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DVTAEYILTSAWVGLGREEAKKGNLDKAIELLQKARQKWPFDQDLKKEIELLGNISSKKN
HHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHH
ILSNSSQNRRSNGSQTVILLDSELFRSIDDLKSELHSTIVSLKDTHSYNKKQESFSKKEI
HHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLGLILIFTLVSFCNLYFTFLLWKRR
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSIFQIFIYSILLMLILLTKDSFPDEMSGGHENAKMFIEEKRYIEAEKLAISLLTNNPS
CHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DVTAEYILTSAWVGLGREEAKKGNLDKAIELLQKARQKWPFDQDLKKEIELLGNISSKKN
HHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHH
ILSNSSQNRRSNGSQTVILLDSELFRSIDDLKSELHSTIVSLKDTHSYNKKQESFSKKEI
HHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLGLILIFTLVSFCNLYFTFLLWKRR
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA