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The map label for this gene is 45656712

Identifier: 45656712

GI number: 45656712

Start: 991916

End: 992989

Strand: Reverse

Name: 45656712

Synonym: LIC10821

Alternate gene names: NA

Gene position: 992989-991916 (Counterclockwise)

Preceding gene: 45656713

Following gene: 45656710

Centisome position: 23.22

GC content: 42.83

Gene sequence:

>1074_bases
ATGAAACAAATTTTTAGTATTTGGTTGGCAGCTTTATTGTTGTTCAGCGGATGTGCCAACGAAAACGGAGGAAATAAAAG
TTCTTCCCTGTTGCTTTCCGGAATTGTCAGCGAACAGCTGTTAAATATCGTGGCGGATCCAAAATCATCGGAATCGGTCA
TTATCATTCCTACGCTTTACGTAGATTCTATTTCCGGAAGCGATTCCAATGCTGGTACACAATCCGCTCCGTTTAAGACG
ATTACTAAGGCCACTTTAGTTGCCACGGCGAGCGGCATCAAAGTAATTGCGGTTGCACCGGGTACGTATGACGCGTCCCT
GGGAGAAGTTTTTCCAATTTATATTCCCGAAGGTGTCAATCTATATGGGGACAGTAACGGGAAAGGTTTAGCAGGCGGCT
CTTCCTCCCTTTATGCAGGACCACCAGGAACTCCACCTAAGACAGGACCAACTTTGATTTCTGGAGTTGGAAGTTTTCCG
CCGACTATTTATTTTCCTACCGTGGTTCCAGAATCCAGTAGTCAGATCGCAGGGTTTAAAATCAATAATCCTAGATTTTA
CGACTCTGGTTCTACAGTTAATGCGGGAATTTATTTAAAAAATACCGGAATTACGGTCAAAAATAATACAGTAACTGCAG
TAAAAGGAACAGGAATTAGCATCCATCCTTCTAATGGGATCGGAGGGGGACACGTCATTTCCGGTAATTTCATTACTTCC
AATTCTCACGGATTGCATGAAGCGGATTCAAATTCGAATAGCAAAGTGGAAGACAATGTGATCACTCAAAATTGGATCGG
CGTTTCCACTTTTGATGGTCTTCTTGATTTGGGAGGTGGAAGTCGTGGAAGTAAGGGAGGGAACACTCTTTCCTGCAATA
CAATGTATGACTTGGAAGTAGACGTTTCTCAAGGGTTTCATTTCTATGCTTTAAACAATTTCTGGGATCATATCCCCCTT
ACGATCGCTACATTTCCAGATGGAAGTGCGACGGCGGATCTTGAAAACTCCTATCAGTATGCCATTATGCATATAAGCGG
AAGTAGTGTGGTTTCTAAACCTTGTAATCCTTGA

Upstream 100 bases:

>100_bases
TTTAATTTTTTCGAAGTAAAAAATTGATTTCTGTTGTTATATACTCACAAAGTTTCGATTTGCTTGAAAATGCAAATCTT
TTGAAATCAGGAGAATTTAA

Downstream 100 bases:

>100_bases
TGGATTTCCCCACTTTTGTAGAAAGAGTGGGGCTTTCTTTCCCCCTTTTAGAGAAGAACGTAGGTTTTAACAGTAATTGA
ATTAACGAGTAATATAAGAT

Product: putative lipoprotein

Products: NA

Alternate protein names: S-Layer Domain Protein

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MKQIFSIWLAALLLFSGCANENGGNKSSSLLLSGIVSEQLLNIVADPKSSESVIIIPTLYVDSISGSDSNAGTQSAPFKT
ITKATLVATASGIKVIAVAPGTYDASLGEVFPIYIPEGVNLYGDSNGKGLAGGSSSLYAGPPGTPPKTGPTLISGVGSFP
PTIYFPTVVPESSSQIAGFKINNPRFYDSGSTVNAGIYLKNTGITVKNNTVTAVKGTGISIHPSNGIGGGHVISGNFITS
NSHGLHEADSNSNSKVEDNVITQNWIGVSTFDGLLDLGGGSRGSKGGNTLSCNTMYDLEVDVSQGFHFYALNNFWDHIPL
TIATFPDGSATADLENSYQYAIMHISGSSVVSKPCNP

Sequences:

>Translated_357_residues
MKQIFSIWLAALLLFSGCANENGGNKSSSLLLSGIVSEQLLNIVADPKSSESVIIIPTLYVDSISGSDSNAGTQSAPFKT
ITKATLVATASGIKVIAVAPGTYDASLGEVFPIYIPEGVNLYGDSNGKGLAGGSSSLYAGPPGTPPKTGPTLISGVGSFP
PTIYFPTVVPESSSQIAGFKINNPRFYDSGSTVNAGIYLKNTGITVKNNTVTAVKGTGISIHPSNGIGGGHVISGNFITS
NSHGLHEADSNSNSKVEDNVITQNWIGVSTFDGLLDLGGGSRGSKGGNTLSCNTMYDLEVDVSQGFHFYALNNFWDHIPL
TIATFPDGSATADLENSYQYAIMHISGSSVVSKPCNP
>Mature_357_residues
MKQIFSIWLAALLLFSGCANENGGNKSSSLLLSGIVSEQLLNIVADPKSSESVIIIPTLYVDSISGSDSNAGTQSAPFKT
ITKATLVATASGIKVIAVAPGTYDASLGEVFPIYIPEGVNLYGDSNGKGLAGGSSSLYAGPPGTPPKTGPTLISGVGSFP
PTIYFPTVVPESSSQIAGFKINNPRFYDSGSTVNAGIYLKNTGITVKNNTVTAVKGTGISIHPSNGIGGGHVISGNFITS
NSHGLHEADSNSNSKVEDNVITQNWIGVSTFDGLLDLGGGSRGSKGGNTLSCNTMYDLEVDVSQGFHFYALNNFWDHIPL
TIATFPDGSATADLENSYQYAIMHISGSSVVSKPCNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36940; Mature: 36940

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIFSIWLAALLLFSGCANENGGNKSSSLLLSGIVSEQLLNIVADPKSSESVIIIPTLY
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
VDSISGSDSNAGTQSAPFKTITKATLVATASGIKVIAVAPGTYDASLGEVFPIYIPEGVN
EECCCCCCCCCCCCCCCCHHHHHEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCCE
LYGDSNGKGLAGGSSSLYAGPPGTPPKTGPTLISGVGSFPPTIYFPTVVPESSSQIAGFK
EEECCCCCEECCCCCCEECCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCEEEEE
INNPRFYDSGSTVNAGIYLKNTGITVKNNTVTAVKGTGISIHPSNGIGGGHVISGNFITS
ECCCEEECCCCEEEEEEEEEECCEEEECCEEEEEECCCEEEECCCCCCCCEEEECCEEEC
NSHGLHEADSNSNSKVEDNVITQNWIGVSTFDGLLDLGGGSRGSKGGNTLSCNTMYDLEV
CCCCCCCCCCCCCCEECCCEEEECCCCEEHHCHHEECCCCCCCCCCCCEEEECEEEEEEE
DVSQGFHFYALNNFWDHIPLTIATFPDGSATADLENSYQYAIMHISGSSVVSKPCNP
EHHCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKQIFSIWLAALLLFSGCANENGGNKSSSLLLSGIVSEQLLNIVADPKSSESVIIIPTLY
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
VDSISGSDSNAGTQSAPFKTITKATLVATASGIKVIAVAPGTYDASLGEVFPIYIPEGVN
EECCCCCCCCCCCCCCCCHHHHHEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCCE
LYGDSNGKGLAGGSSSLYAGPPGTPPKTGPTLISGVGSFPPTIYFPTVVPESSSQIAGFK
EEECCCCCEECCCCCCEECCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCEEEEE
INNPRFYDSGSTVNAGIYLKNTGITVKNNTVTAVKGTGISIHPSNGIGGGHVISGNFITS
ECCCEEECCCCEEEEEEEEEECCEEEECCEEEEEECCCEEEECCCCCCCCEEEECCEEEC
NSHGLHEADSNSNSKVEDNVITQNWIGVSTFDGLLDLGGGSRGSKGGNTLSCNTMYDLEV
CCCCCCCCCCCCCCEECCCEEEECCCCEEHHCHHEECCCCCCCCCCCCEEEECEEEEEEE
DVSQGFHFYALNNFWDHIPLTIATFPDGSATADLENSYQYAIMHISGSSVVSKPCNP
EHHCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA