Click here to switch to the map view.

The map label for this gene is 45656639

Identifier: 45656639

GI number: 45656639

Start: 907257

End: 908003

Strand: Reverse

Name: 45656639

Synonym: LIC10743

Alternate gene names: NA

Gene position: 908003-907257 (Counterclockwise)

Preceding gene: 45656640

Following gene: 45656638

Centisome position: 21.23

GC content: 35.34

Gene sequence:

>747_bases
ATGAAAAGTCAAGAAATCAAATACGTAGGAATCGACTGTGGAAAAAAAACTTTAGAAGTCATACGGATCGGAGACAACTC
TCTTCATCAAAGACAACAATTTTCAACAACAGAAATTGGAATTTCTAAATTGATAAATTGGCTCAATCCAAATGATGTAG
TAGGCTTAGAAGCAGGCTCTCAATCTTTTAGAATTGCAAAATCAATATTAAACAAAGGGATTCAAGTGATCGTCTTGAAT
CCAGGAGACTTAGCAACAATCTATCAATCTTTAAAAAAAACAGATAAAGAAGACTCTCTCAAGATTGCGAGACTCATACA
ACGTTTTCCAATAGAAGAATTACCGGTCGTTCCGATTCCAAACGATGAAGAGGAGGACAATAGAAGACTATGCACGGAAC
AAGAGAACTGGACAAGGCAACTAACGCAAAGTAAGAATCGACTTCATAGTTTATTTACTCAAGCCGGTTTGACACATATC
ACTAAAAAGCATTTAAGAACAAAAGCAAATAGAGAAATCTCTGTAGCCTTACTTCCAAGTCGATACCAAAAAGAAGCGGA
AAGAATATTAAAAGTTTTAGATTTAGTGGAACAAAATCTAAAACTCATAGAAGAAGAAATTAAAGAAGCCTTAAAGAAAA
ATAAGGCTTATGCTCAAACGATTATGTCAATGCCTGGGGTCGGTATGATTACTTCTTTGGCGATCAAAGCAAACTCAATA
TCTCACTCCCTATGGGTCGTTCGATAA

Upstream 100 bases:

>100_bases
GTGGCAACTTCACAAAGTTGACCACGAATAGGAGTGCTGGTATATCACAACTCGGGCTTGTTAAGACCTTCCGCTCCACT
TAAAACTTTAGGAGAAAGAA

Downstream 100 bases:

>100_bases
GTTATATGGGTAATTGTAAACGATTCTCTTCAGCTAAACAAGCCGCTTACTACGTTGGTCTTGTGCCCAGGGTTGATATT
TCAGGTGACTCCGCTTATTA

Product: transposase, ISlin1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKSQEIKYVGIDCGKKTLEVIRIGDNSLHQRQQFSTTEIGISKLINWLNPNDVVGLEAGSQSFRIAKSILNKGIQVIVLN
PGDLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIPNDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHI
TKKHLRTKANREISVALLPSRYQKEAERILKVLDLVEQNLKLIEEEIKEALKKNKAYAQTIMSMPGVGMITSLAIKANSI
SHSLWVVR

Sequences:

>Translated_248_residues
MKSQEIKYVGIDCGKKTLEVIRIGDNSLHQRQQFSTTEIGISKLINWLNPNDVVGLEAGSQSFRIAKSILNKGIQVIVLN
PGDLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIPNDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHI
TKKHLRTKANREISVALLPSRYQKEAERILKVLDLVEQNLKLIEEEIKEALKKNKAYAQTIMSMPGVGMITSLAIKANSI
SHSLWVVR
>Mature_248_residues
MKSQEIKYVGIDCGKKTLEVIRIGDNSLHQRQQFSTTEIGISKLINWLNPNDVVGLEAGSQSFRIAKSILNKGIQVIVLN
PGDLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIPNDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHI
TKKHLRTKANREISVALLPSRYQKEAERILKVLDLVEQNLKLIEEEIKEALKKNKAYAQTIMSMPGVGMITSLAIKANSI
SHSLWVVR

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28204; Mature: 28204

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQEIKYVGIDCGKKTLEVIRIGDNSLHQRQQFSTTEIGISKLINWLNPNDVVGLEAGS
CCCCCEEEEECCCCHHEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCC
QSFRIAKSILNKGIQVIVLNPGDLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIP
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCC
NDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHITKKHLRTKANREISVALLPS
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCH
RYQKEAERILKVLDLVEQNLKLIEEEIKEALKKNKAYAQTIMSMPGVGMITSLAIKANSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
SHSLWVVR
CCCEEEEC
>Mature Secondary Structure
MKSQEIKYVGIDCGKKTLEVIRIGDNSLHQRQQFSTTEIGISKLINWLNPNDVVGLEAGS
CCCCCEEEEECCCCHHEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCC
QSFRIAKSILNKGIQVIVLNPGDLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIP
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCC
NDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHITKKHLRTKANREISVALLPS
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCH
RYQKEAERILKVLDLVEQNLKLIEEEIKEALKKNKAYAQTIMSMPGVGMITSLAIKANSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
SHSLWVVR
CCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA