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The map label for this gene is 45656638

Identifier: 45656638

GI number: 45656638

Start: 906892

End: 907251

Strand: Reverse

Name: 45656638

Synonym: LIC10742

Alternate gene names: NA

Gene position: 907251-906892 (Counterclockwise)

Preceding gene: 45656639

Following gene: 45656632

Centisome position: 21.21

GC content: 36.94

Gene sequence:

>360_bases
ATGGGTAATTGTAAACGATTCTCTTCAGCTAAACAAGCCGCTTACTACGTTGGTCTTGTGCCCAGGGTTGATATTTCAGG
TGACTCCGCTTATTACGGCAGAATTGTAAATCGTGGTTGTCATTCAATTCGAAGAGTGATCGTTCAGGCGGCTTGGAGTC
TTGTCCGTTGTCAATATGGTGGTAAGATAAAAGAATTTTATCAAAGATTATATCCTAAAAAAGGTGCTAAAAAATCAATC
ATAGCCACTTCTCGCAAAATGATCGAAATCCTTTACACAATGATTAAAACGGGAGAACTTTTCGATTCTATGCCTGAAAA
AGTATTGAATCGAAAATTAACTCAATATGGTCTTATGTAA

Upstream 100 bases:

>100_bases
CTCAAACGATTATGTCAATGCCTGGGGTCGGTATGATTACTTCTTTGGCGATCAAAGCAAACTCAATATCTCACTCCCTA
TGGGTCGTTCGATAAGTTAT

Downstream 100 bases:

>100_bases
TAAAATTGCGGAAGGGATTGACACAAGAAACATAGGAGAGAGCACCCACAAGTTGAATAGGATTTTAGAATCAGAAGAAT
TAAAAACGCACATTTTTCAA

Product: transposase, ISlin1

Products: NA

Alternate protein names: ISlin1 Transposase

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MGNCKRFSSAKQAAYYVGLVPRVDISGDSAYYGRIVNRGCHSIRRVIVQAAWSLVRCQYGGKIKEFYQRLYPKKGAKKSI
IATSRKMIEILYTMIKTGELFDSMPEKVLNRKLTQYGLM

Sequences:

>Translated_119_residues
MGNCKRFSSAKQAAYYVGLVPRVDISGDSAYYGRIVNRGCHSIRRVIVQAAWSLVRCQYGGKIKEFYQRLYPKKGAKKSI
IATSRKMIEILYTMIKTGELFDSMPEKVLNRKLTQYGLM
>Mature_118_residues
GNCKRFSSAKQAAYYVGLVPRVDISGDSAYYGRIVNRGCHSIRRVIVQAAWSLVRCQYGGKIKEFYQRLYPKKGAKKSII
ATSRKMIEILYTMIKTGELFDSMPEKVLNRKLTQYGLM

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13610; Mature: 13479

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNCKRFSSAKQAAYYVGLVPRVDISGDSAYYGRIVNRGCHSIRRVIVQAAWSLVRCQYG
CCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKIKEFYQRLYPKKGAKKSIIATSRKMIEILYTMIKTGELFDSMPEKVLNRKLTQYGLM
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GNCKRFSSAKQAAYYVGLVPRVDISGDSAYYGRIVNRGCHSIRRVIVQAAWSLVRCQYG
CCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKIKEFYQRLYPKKGAKKSIIATSRKMIEILYTMIKTGELFDSMPEKVLNRKLTQYGLM
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA