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The map label for this gene is yebA [C]

Identifier: 45656619

GI number: 45656619

Start: 876991

End: 878184

Strand: Reverse

Name: yebA [C]

Synonym: LIC10721

Alternate gene names: 45656619

Gene position: 878184-876991 (Counterclockwise)

Preceding gene: 45656620

Following gene: 45656617

Centisome position: 20.53

GC content: 37.27

Gene sequence:

>1194_bases
ATGCGAAATATCATTTTCATTTTTATTTCATTCACTTCTTATAATCTATCTGCGGATATTCCAGATTTAAAAGGAGAATG
CAAACCCAAAGAATGGATCTGTATTCTCACACGAAATGAAAATAATAAAATAGAATTCTACGTTCAAAACCGAACTCCTT
CCGGAGAATATCCATTCTCAGTGAACTTCTACTTTACGAGTTTAGAAAATTTTGAATCCGACGTTACTCTTCCTTATCGT
TTTATTTCCAGAGGTAGTTCAGAACCGAAAAAGATTCTTACAATCAGTCCGATCGACATTTATAAATCAAGTTCTTACAG
TTCTCAAATTTACGTAAGAGCAGGAGACAACAACGCCCCCAAAGAAAATATGATTCCTTATCGTTTACCTTTCGAATCCA
CTTCCAGAGTTGGACAAGGTTACAAAGGAAAGTTCACCCATGCCGGAACAATTCCCTACGCACTCGATTTCGTTCTTCCG
GAAGGAAGTTCTGTTTTAGCGGCAAAGGGTGGTCTTGTAATCGCCAAAGAAGACAAATATCAATCCGGCGGAATCCATCC
ATCCTTTAAAGATAAAGCAAACTTCATCCAGATTCTTCATAAAGACGGAAGTATAGCAGAATACGCTCATTTAAAATACA
AAAGTGTATTTGTTCAGATAGGACAAATCATTCAGACTGGGGACAAAATTGCTCTTTCCGGAAACACAGGTTTTAGCAGC
GCCCCTCACTTACACTTTCACGTTTTAAGACCATCGATTGACTTTCAAACCTTAGAATCTTTTCCCACTTCTTTCGAGAC
CGACGAAGGAGTGTTAGACGAACTCAAAACCGGAACCGTCTATTGGAATCCTTCTAAAGTTCTACCCGCAGGAAAAATTT
TCTTTGAAGAAGATCTAAAGATTTGTTCTGATCTAGTTCAAAAAAAACTCTTGGACTGCGAAGAAAAATTGAATCCTCAA
AAACGAGCGATTCTCGCGCTCGAAGTAAAAAAACCTGGAAAATATGATTTAAAGGTGGAAGTATGTAATCCAAATTTTGT
TTGTAAAAGAATCGATTGGATTCTTCAACCCGAATGGAAGTCTTCGATATTTTACCTCGACTGGAATTTATTTCCAGAAC
AGATGACCGGCAATTATAGAATTCAAGTGATCAACGATATTGAAATCATCAAGACCTGGGTTGTTGAAAGATAA

Upstream 100 bases:

>100_bases
CTGCAAGGTTCTGTCCCTGGCGCTGCGATTCATAGTGAGCAGTGCCATTGAGTTACTTTTGAGACAGGTTCTTATATCTT
TTAGAAAAAGATGAAACGAG

Downstream 100 bases:

>100_bases
CAAATGAATATAATTTTACTATTACTGATCTCTATAAAGAGTTTGCCTTCAATTCTTAGAATGAATCATTTTTGAATTTT
CAATAAAATGTGGTAGTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MRNIIFIFISFTSYNLSADIPDLKGECKPKEWICILTRNENNKIEFYVQNRTPSGEYPFSVNFYFTSLENFESDVTLPYR
FISRGSSEPKKILTISPIDIYKSSSYSSQIYVRAGDNNAPKENMIPYRLPFESTSRVGQGYKGKFTHAGTIPYALDFVLP
EGSSVLAAKGGLVIAKEDKYQSGGIHPSFKDKANFIQILHKDGSIAEYAHLKYKSVFVQIGQIIQTGDKIALSGNTGFSS
APHLHFHVLRPSIDFQTLESFPTSFETDEGVLDELKTGTVYWNPSKVLPAGKIFFEEDLKICSDLVQKKLLDCEEKLNPQ
KRAILALEVKKPGKYDLKVEVCNPNFVCKRIDWILQPEWKSSIFYLDWNLFPEQMTGNYRIQVINDIEIIKTWVVER

Sequences:

>Translated_397_residues
MRNIIFIFISFTSYNLSADIPDLKGECKPKEWICILTRNENNKIEFYVQNRTPSGEYPFSVNFYFTSLENFESDVTLPYR
FISRGSSEPKKILTISPIDIYKSSSYSSQIYVRAGDNNAPKENMIPYRLPFESTSRVGQGYKGKFTHAGTIPYALDFVLP
EGSSVLAAKGGLVIAKEDKYQSGGIHPSFKDKANFIQILHKDGSIAEYAHLKYKSVFVQIGQIIQTGDKIALSGNTGFSS
APHLHFHVLRPSIDFQTLESFPTSFETDEGVLDELKTGTVYWNPSKVLPAGKIFFEEDLKICSDLVQKKLLDCEEKLNPQ
KRAILALEVKKPGKYDLKVEVCNPNFVCKRIDWILQPEWKSSIFYLDWNLFPEQMTGNYRIQVINDIEIIKTWVVER
>Mature_397_residues
MRNIIFIFISFTSYNLSADIPDLKGECKPKEWICILTRNENNKIEFYVQNRTPSGEYPFSVNFYFTSLENFESDVTLPYR
FISRGSSEPKKILTISPIDIYKSSSYSSQIYVRAGDNNAPKENMIPYRLPFESTSRVGQGYKGKFTHAGTIPYALDFVLP
EGSSVLAAKGGLVIAKEDKYQSGGIHPSFKDKANFIQILHKDGSIAEYAHLKYKSVFVQIGQIIQTGDKIALSGNTGFSS
APHLHFHVLRPSIDFQTLESFPTSFETDEGVLDELKTGTVYWNPSKVLPAGKIFFEEDLKICSDLVQKKLLDCEEKLNPQ
KRAILALEVKKPGKYDLKVEVCNPNFVCKRIDWILQPEWKSSIFYLDWNLFPEQMTGNYRIQVINDIEIIKTWVVER

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=95, Percent_Identity=34.7368421052632, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 45316; Mature: 45316

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNIIFIFISFTSYNLSADIPDLKGECKPKEWICILTRNENNKIEFYVQNRTPSGEYPFS
CCEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCEE
VNFYFTSLENFESDVTLPYRFISRGSSEPKKILTISPIDIYKSSSYSSQIYVRAGDNNAP
EEEEEEECCCCCCCCCEEEHHHHCCCCCCCEEEEECCHHEEECCCCCCEEEEEECCCCCC
KENMIPYRLPFESTSRVGQGYKGKFTHAGTIPYALDFVLPEGSSVLAAKGGLVIAKEDKY
HHCCCCEECCCCCHHHHCCCCCCCEEECCCCCEEEEEEECCCCEEEEECCCEEEEECCCC
QSGGIHPSFKDKANFIQILHKDGSIAEYAHLKYKSVFVQIGQIIQTGDKIALSGNTGFSS
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
APHLHFHVLRPSIDFQTLESFPTSFETDEGVLDELKTGTVYWNPSKVLPAGKIFFEEDLK
CCCEEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCEEEHHHHH
ICSDLVQKKLLDCEEKLNPQKRAILALEVKKPGKYDLKVEVCNPNFVCKRIDWILQPEWK
HHHHHHHHHHHCHHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCEEEEEEEEEECCCCC
SSIFYLDWNLFPEQMTGNYRIQVINDIEIIKTWVVER
CEEEEEEEECCHHHCCCCEEEEEECCCEEEHHHHCCC
>Mature Secondary Structure
MRNIIFIFISFTSYNLSADIPDLKGECKPKEWICILTRNENNKIEFYVQNRTPSGEYPFS
CCEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCEE
VNFYFTSLENFESDVTLPYRFISRGSSEPKKILTISPIDIYKSSSYSSQIYVRAGDNNAP
EEEEEEECCCCCCCCCEEEHHHHCCCCCCCEEEEECCHHEEECCCCCCEEEEEECCCCCC
KENMIPYRLPFESTSRVGQGYKGKFTHAGTIPYALDFVLPEGSSVLAAKGGLVIAKEDKY
HHCCCCEECCCCCHHHHCCCCCCCEEECCCCCEEEEEEECCCCEEEEECCCEEEEECCCC
QSGGIHPSFKDKANFIQILHKDGSIAEYAHLKYKSVFVQIGQIIQTGDKIALSGNTGFSS
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
APHLHFHVLRPSIDFQTLESFPTSFETDEGVLDELKTGTVYWNPSKVLPAGKIFFEEDLK
CCCEEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCEEEHHHHH
ICSDLVQKKLLDCEEKLNPQKRAILALEVKKPGKYDLKVEVCNPNFVCKRIDWILQPEWK
HHHHHHHHHHHCHHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCEEEEEEEEEECCCCC
SSIFYLDWNLFPEQMTGNYRIQVINDIEIIKTWVVER
CEEEEEEEECCHHHCCCCEEEEEECCCEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]