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The map label for this gene is 45656565

Identifier: 45656565

GI number: 45656565

Start: 812419

End: 812886

Strand: Direct

Name: 45656565

Synonym: LIC10667

Alternate gene names: NA

Gene position: 812419-812886 (Clockwise)

Preceding gene: 45656555

Following gene: 45656566

Centisome position: 18.99

GC content: 33.76

Gene sequence:

>468_bases
TTGATTTTCAATAAATTTAAGTTTAATGATTCGTTTACAATTGAGGCAATTATGAATTCACAATTAAAGGAATTTACATA
TGAGATTCCAGTTCTTTGGAGTCAATGTGATCCTAACGGACATTTGAATGTTGGGAATTTTCAAGTGTTTCTTCACGAAG
GTAGAATGGTCGCATTAGAAGAGGCTGGTTTTAGCTATGAAAAAATGAGAGAAGAAAATATCGGACCAATGATTTTGAGA
TCGGAAACCGATTATAAAGCGGAAATTCGTTATCCGGAAGCGGTGATAGTAATTACAAGTTTTGGAGAATTAAAAGGCTC
TCGTTGTAAAATTTTTCAAAAACTCATTCGAAAATCAGATGGTAAGATCGCTTGCGAATCTGTTTCGGATTGTATCTTAT
TTGATTTTTCTAAAAAAAGACCTTGGAAATATCCTGATTCTTTGCTCGTCGCTTTTGGTGCTAAGTGA

Upstream 100 bases:

>100_bases
TATTTTTCTAATGTTTGAGCTACACTAGTTTTTTCAGTAGGAAAAATAGAATAGAAATTGAGCTTGTTATTTAAAGAAAT
TTTATAAAACTATTTCAGAA

Downstream 100 bases:

>100_bases
GCTTAAGAGTTTTTTGGATTTCAATAAAGTCAGACCATTTTTGTTTTGTGGGTTTTAAAAAATCGATTATTGTCGTAGAA
ATGTAGTTAGGTGGGATGTT

Product: thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIFNKFKFNDSFTIEAIMNSQLKEFTYEIPVLWSQCDPNGHLNVGNFQVFLHEGRMVALEEAGFSYEKMREENIGPMILR
SETDYKAEIRYPEAVIVITSFGELKGSRCKIFQKLIRKSDGKIACESVSDCILFDFSKKRPWKYPDSLLVAFGAK

Sequences:

>Translated_155_residues
MIFNKFKFNDSFTIEAIMNSQLKEFTYEIPVLWSQCDPNGHLNVGNFQVFLHEGRMVALEEAGFSYEKMREENIGPMILR
SETDYKAEIRYPEAVIVITSFGELKGSRCKIFQKLIRKSDGKIACESVSDCILFDFSKKRPWKYPDSLLVAFGAK
>Mature_155_residues
MIFNKFKFNDSFTIEAIMNSQLKEFTYEIPVLWSQCDPNGHLNVGNFQVFLHEGRMVALEEAGFSYEKMREENIGPMILR
SETDYKAEIRYPEAVIVITSFGELKGSRCKIFQKLIRKSDGKIACESVSDCILFDFSKKRPWKYPDSLLVAFGAK

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17898; Mature: 17898

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFNKFKFNDSFTIEAIMNSQLKEFTYEIPVLWSQCDPNGHLNVGNFQVFLHEGRMVALE
CCCCEEECCCCEEEHHHHHHHHHHHEEECCEEEECCCCCCCEECCCEEEEEECCCEEEEE
EAGFSYEKMREENIGPMILRSETDYKAEIRYPEAVIVITSFGELKGSRCKIFQKLIRKSD
CCCCCHHHHHHCCCCCEEEECCCCCEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHCCC
GKIACESVSDCILFDFSKKRPWKYPDSLLVAFGAK
CCEEECCCCCEEEEECCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MIFNKFKFNDSFTIEAIMNSQLKEFTYEIPVLWSQCDPNGHLNVGNFQVFLHEGRMVALE
CCCCEEECCCCEEEHHHHHHHHHHHEEECCEEEECCCCCCCEECCCEEEEEECCCEEEEE
EAGFSYEKMREENIGPMILRSETDYKAEIRYPEAVIVITSFGELKGSRCKIFQKLIRKSD
CCCCCHHHHHHCCCCCEEEECCCCCEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHCCC
GKIACESVSDCILFDFSKKRPWKYPDSLLVAFGAK
CCEEECCCCCEEEEECCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA