| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is ybbP [H]
Identifier: 45656417
GI number: 45656417
Start: 624912
End: 627449
Strand: Direct
Name: ybbP [H]
Synonym: LIC10519
Alternate gene names: 45656417
Gene position: 624912-627449 (Clockwise)
Preceding gene: 45656416
Following gene: 45656426
Centisome position: 14.61
GC content: 35.42
Gene sequence:
>2538_bases ATGAAATTTAAATTATTAATTCAATCCATCGCGCGCGACTTTCGATCTAGAAAAAGTTCAGCTTTGCAAATTGTCTTGGC GATTGTGATCGGAACCGGTTCTGTTACGGCGATTCACGCTTATAGAGAAGAACTAAGTCGTTCTATTTTAAAAGAAGCGC GGACTTTAATGGGTTCCGATTTGCTCGTTCAATCCTCATCTCCGTTTACTCGGGAGCAAAAAGAATTTATGTCTCAAAGG TTGCCAAAAGGCTCCGAAACCTCTGAACTCGTGCAGTTTGCTTCTATGCTTCGCAATCAGGAAAACGACGAAACTACACT TTCTTTGATTAAAACAGTGTCCGGGAAGTTTCCTTATTACGGTGAAATCATTACTGAACCCGCAGGTGTGTATCGTAAAT TAAAAGAAGGTGAAATTCTTCTCGAAGAAAATTTAATTAAAAATTTAAAACTTAAAATTGGTTCTTCTGTTTCGCTCGGA GAAAGAGATTTTATTTTAAAAGGAAAAGTAATCAAAGAGCCAGGGATTGCGGGAAGTTTTCTTTCAATGGCTCCTACCGC GATTATATCTGGTTCTTCTCTTGTATCTACAGGATTGGAACAAAGAGGATCTAGGATCAGCTATATGATAGCGGTCAAAC TCAAAGATCCTTTGATTGCGGGAAAATATAAAGAAAATCATTTCAAAGAGTATATTCAAAAAGACTTAACTCTTTACGAT TCGACAGAAACTAATTCCGGTTCTAGAAAATTTTTAACTAACACTTTGGATTTTTTCAGTCTACTCGGTTTATCCGCGTT TTTTTTAGGAGGAATTTCCATCTTACTTGTAAGTAGAGCGGGTATTAGAGAAAAATCCGGGGCGATTGCGGTCTTAAAGT GTTTGGGAGCAAGTCCTAATGCTGTAAGTTGGATTGTATTAGGAGAATTATTTCTATTTTCTTTGATCGGATCTGTTTTC GGAATATTATTTGGAAATATATTATTGAAATGGATTCCAGATCTAGCAGGAGAGGAAATACTCAGTTTTCAACCTACGAT AGGATTTTCTTCCTTGTTTTGGGGGCTTTTGATTGGAGTTCTGATTCCATTTTTTTCTTCGATTGAATCGTTGATCGAAA TTAGAACGTTAAAACCAATCCTTGCTCTCAAACAGGAATTTCAGGAAGAAACAAATCAAATTCCTAAATTTAGGGTCACT CAGATTTTGGGTTATTTAATTTTATTCGTTTTATTTTTCGCTTTGGCTTGGTGGGAAACGGAAAGTGCTCTAAAAGGTTT GATTTTATGTTCTATTTTACTAATTCTTCCGTTAATCATATTTTTAGTATATTCTGGAATTAGAATATTTATATCTAGGC TAAGGGATCGAAATGACTTTTCTCCTTTTGTTCGGTTTATCGTTGGTAAATTTGACAGACCTGGAACGTCTCTTTCCCTT TCGATCATAGGATTGACAAGTTCTCTATTTATTCTTCTTTTATCTTTAATTGTAAGTGAAAGTCTTTTAGAATACAGCGG AGCCAAAGATAAAGAAAGAAGACCCAATCTGTTTGTTTTGGATATTAGAGCCGAACAAAAAGAACATTTTGAGGAAGTTG CTAAGGAATTTGGAGCAGAGAAGTTGATAGTCGCACCCGTAATTGGAGCTAGATTATCTAAGATCAACGGCGAGGTGGTA AAAAAAGACGAAACCGAATCTTCCGCGTTAAGAAGAGATTGGAGATCCACCGCGAGGACGAGAGAATATTTTCTTTCCTA TAGAAATGAACCGTATCCTACGGAAAAAATAGTGGAAGGAGATTTTTGGAGAAAAGGAGAAGAAGATCAGATTTCAATCG AAAAAGAATTTTCTACATATCTAAAAGTTAACTTAGGAGATAGTCTTTCGTTTTTGGTCAGTGGAGTTGAAGTAACAGGT GTTATACGAAATTTTAGAACCGTAAACTGGGCGGATATGAGACCTAACTTTGTGGTTTTGTTTTCCAAAGGGATTTTGGA AAAGGAGCCTAGTTATTATTTGAGTTCTTTAAGAATCGAATCAGAAGAAAAAAGATATGACCTTCAAAGAAATCTGATTT CGAAATACCCGAATTTGACAATCATCGATACGGATAAAGCCGTGCGTGCATTTTTAGGAATTTTGGAAAAGATTTCCTTT ACAATTCAGCTGATGACCGGATTGATTTTAGGCGCTTCTTTATTGCTCGTTTTAACCGCTTTAAATTCAAGCCGTAAAGA AAGGATCGAAGAGACTACTTTATTACGTATTATAGGGGGAACTTCTGTTTTTTTAAAAAAAGTTTTTTTGTGGGAAGGAA TTCTTTTGGGTACGTTTTCATTTTTGTTGGCTTTGTTTTTGGCTTGGATTGCGAGTATTTTAATAGGTAAACAGGTTTTA GAAATAGAAATGTCTTATCCATTTTTTGAATACTTGTTTGTTTATATATTTACGATTTTTGCAACTACTTCGGTTTATTA TCTGAATCTGAGAGGAGAATGGAAAAATCCTCCCGTGAGTTTTATGAAGGCGATTTAA
Upstream 100 bases:
>100_bases AGAAAAAAAAATCTTTAAATAAACCAAAAATTCTTTCTTCAGAAAAAAAGTCCGTATCTAAACATACTTCTACAAAAAGA AAAGTTTCTGCTAAAAAAAG
Downstream 100 bases:
>100_bases AATTTGATTTTACTATTTTAAATTTTTATAATAAACTTTTAATTTTATCGTGGTTATAAAATGAGAATATTGTTTCTTCT CTGTAAAACAACAAGTCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 845; Mature: 845
Protein sequence:
>845_residues MKFKLLIQSIARDFRSRKSSALQIVLAIVIGTGSVTAIHAYREELSRSILKEARTLMGSDLLVQSSSPFTREQKEFMSQR LPKGSETSELVQFASMLRNQENDETTLSLIKTVSGKFPYYGEIITEPAGVYRKLKEGEILLEENLIKNLKLKIGSSVSLG ERDFILKGKVIKEPGIAGSFLSMAPTAIISGSSLVSTGLEQRGSRISYMIAVKLKDPLIAGKYKENHFKEYIQKDLTLYD STETNSGSRKFLTNTLDFFSLLGLSAFFLGGISILLVSRAGIREKSGAIAVLKCLGASPNAVSWIVLGELFLFSLIGSVF GILFGNILLKWIPDLAGEEILSFQPTIGFSSLFWGLLIGVLIPFFSSIESLIEIRTLKPILALKQEFQEETNQIPKFRVT QILGYLILFVLFFALAWWETESALKGLILCSILLILPLIIFLVYSGIRIFISRLRDRNDFSPFVRFIVGKFDRPGTSLSL SIIGLTSSLFILLLSLIVSESLLEYSGAKDKERRPNLFVLDIRAEQKEHFEEVAKEFGAEKLIVAPVIGARLSKINGEVV KKDETESSALRRDWRSTARTREYFLSYRNEPYPTEKIVEGDFWRKGEEDQISIEKEFSTYLKVNLGDSLSFLVSGVEVTG VIRNFRTVNWADMRPNFVVLFSKGILEKEPSYYLSSLRIESEEKRYDLQRNLISKYPNLTIIDTDKAVRAFLGILEKISF TIQLMTGLILGASLLLVLTALNSSRKERIEETTLLRIIGGTSVFLKKVFLWEGILLGTFSFLLALFLAWIASILIGKQVL EIEMSYPFFEYLFVYIFTIFATTSVYYLNLRGEWKNPPVSFMKAI
Sequences:
>Translated_845_residues MKFKLLIQSIARDFRSRKSSALQIVLAIVIGTGSVTAIHAYREELSRSILKEARTLMGSDLLVQSSSPFTREQKEFMSQR LPKGSETSELVQFASMLRNQENDETTLSLIKTVSGKFPYYGEIITEPAGVYRKLKEGEILLEENLIKNLKLKIGSSVSLG ERDFILKGKVIKEPGIAGSFLSMAPTAIISGSSLVSTGLEQRGSRISYMIAVKLKDPLIAGKYKENHFKEYIQKDLTLYD STETNSGSRKFLTNTLDFFSLLGLSAFFLGGISILLVSRAGIREKSGAIAVLKCLGASPNAVSWIVLGELFLFSLIGSVF GILFGNILLKWIPDLAGEEILSFQPTIGFSSLFWGLLIGVLIPFFSSIESLIEIRTLKPILALKQEFQEETNQIPKFRVT QILGYLILFVLFFALAWWETESALKGLILCSILLILPLIIFLVYSGIRIFISRLRDRNDFSPFVRFIVGKFDRPGTSLSL SIIGLTSSLFILLLSLIVSESLLEYSGAKDKERRPNLFVLDIRAEQKEHFEEVAKEFGAEKLIVAPVIGARLSKINGEVV KKDETESSALRRDWRSTARTREYFLSYRNEPYPTEKIVEGDFWRKGEEDQISIEKEFSTYLKVNLGDSLSFLVSGVEVTG VIRNFRTVNWADMRPNFVVLFSKGILEKEPSYYLSSLRIESEEKRYDLQRNLISKYPNLTIIDTDKAVRAFLGILEKISF TIQLMTGLILGASLLLVLTALNSSRKERIEETTLLRIIGGTSVFLKKVFLWEGILLGTFSFLLALFLAWIASILIGKQVL EIEMSYPFFEYLFVYIFTIFATTSVYYLNLRGEWKNPPVSFMKAI >Mature_845_residues MKFKLLIQSIARDFRSRKSSALQIVLAIVIGTGSVTAIHAYREELSRSILKEARTLMGSDLLVQSSSPFTREQKEFMSQR LPKGSETSELVQFASMLRNQENDETTLSLIKTVSGKFPYYGEIITEPAGVYRKLKEGEILLEENLIKNLKLKIGSSVSLG ERDFILKGKVIKEPGIAGSFLSMAPTAIISGSSLVSTGLEQRGSRISYMIAVKLKDPLIAGKYKENHFKEYIQKDLTLYD STETNSGSRKFLTNTLDFFSLLGLSAFFLGGISILLVSRAGIREKSGAIAVLKCLGASPNAVSWIVLGELFLFSLIGSVF GILFGNILLKWIPDLAGEEILSFQPTIGFSSLFWGLLIGVLIPFFSSIESLIEIRTLKPILALKQEFQEETNQIPKFRVT QILGYLILFVLFFALAWWETESALKGLILCSILLILPLIIFLVYSGIRIFISRLRDRNDFSPFVRFIVGKFDRPGTSLSL SIIGLTSSLFILLLSLIVSESLLEYSGAKDKERRPNLFVLDIRAEQKEHFEEVAKEFGAEKLIVAPVIGARLSKINGEVV KKDETESSALRRDWRSTARTREYFLSYRNEPYPTEKIVEGDFWRKGEEDQISIEKEFSTYLKVNLGDSLSFLVSGVEVTG VIRNFRTVNWADMRPNFVVLFSKGILEKEPSYYLSSLRIESEEKRYDLQRNLISKYPNLTIIDTDKAVRAFLGILEKISF TIQLMTGLILGASLLLVLTALNSSRKERIEETTLLRIIGGTSVFLKKVFLWEGILLGTFSFLLALFLAWIASILIGKQVL EIEMSYPFFEYLFVYIFTIFATTSVYYLNLRGEWKNPPVSFMKAI
Specific function: Unknown
COG id: COG3127
COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1786704, Length=324, Percent_Identity=26.2345679012346, Blast_Score=117, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 95296; Mature: 95296
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKLLIQSIARDFRSRKSSALQIVLAIVIGTGSVTAIHAYREELSRSILKEARTLMGSD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC LLVQSSSPFTREQKEFMSQRLPKGSETSELVQFASMLRNQENDETTLSLIKTVSGKFPYY CEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC GEIITEPAGVYRKLKEGEILLEENLIKNLKLKIGSSVSLGERDFILKGKVIKEPGIAGSF CHHHCCCHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCCCCEEEECCEECCCCCCCHH LSMAPTAIISGSSLVSTGLEQRGSRISYMIAVKLKDPLIAGKYKENHFKEYIQKDLTLYD HHHCCHHHCCCCHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEE STETNSGSRKFLTNTLDFFSLLGLSAFFLGGISILLVSRAGIREKSGAIAVLKCLGASPN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC AVSWIVLGELFLFSLIGSVFGILFGNILLKWIPDLAGEEILSFQPTIGFSSLFWGLLIGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHH LIPFFSSIESLIEIRTLKPILALKQEFQEETNQIPKFRVTQILGYLILFVLFFALAWWET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCH ESALKGLILCSILLILPLIIFLVYSGIRIFISRLRDRNDFSPFVRFIVGKFDRPGTSLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEE SIIGLTSSLFILLLSLIVSESLLEYSGAKDKERRPNLFVLDIRAEQKEHFEEVAKEFGAE EEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCC KLIVAPVIGARLSKINGEVVKKDETESSALRRDWRSTARTREYFLSYRNEPYPTEKIVEG CEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC DFWRKGEEDQISIEKEFSTYLKVNLGDSLSFLVSGVEVTGVIRNFRTVNWADMRPNFVVL CCCCCCCCCCEEHHHHHHHEEEEECCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCCEEEE FSKGILEKEPSYYLSSLRIESEEKRYDLQRNLISKYPNLTIIDTDKAVRAFLGILEKISF EECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHH TIQLMTGLILGASLLLVLTALNSSRKERIEETTLLRIIGGTSVFLKKVFLWEGILLGTFS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FLLALFLAWIASILIGKQVLEIEMSYPFFEYLFVYIFTIFATTSVYYLNLRGEWKNPPVS HHHHHHHHHHHHHHHCHHHEEEEECCCHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCHH FMKAI HHHCC >Mature Secondary Structure MKFKLLIQSIARDFRSRKSSALQIVLAIVIGTGSVTAIHAYREELSRSILKEARTLMGSD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC LLVQSSSPFTREQKEFMSQRLPKGSETSELVQFASMLRNQENDETTLSLIKTVSGKFPYY CEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC GEIITEPAGVYRKLKEGEILLEENLIKNLKLKIGSSVSLGERDFILKGKVIKEPGIAGSF CHHHCCCHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCCCCEEEECCEECCCCCCCHH LSMAPTAIISGSSLVSTGLEQRGSRISYMIAVKLKDPLIAGKYKENHFKEYIQKDLTLYD HHHCCHHHCCCCHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEE STETNSGSRKFLTNTLDFFSLLGLSAFFLGGISILLVSRAGIREKSGAIAVLKCLGASPN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC AVSWIVLGELFLFSLIGSVFGILFGNILLKWIPDLAGEEILSFQPTIGFSSLFWGLLIGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHH LIPFFSSIESLIEIRTLKPILALKQEFQEETNQIPKFRVTQILGYLILFVLFFALAWWET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCH ESALKGLILCSILLILPLIIFLVYSGIRIFISRLRDRNDFSPFVRFIVGKFDRPGTSLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEE SIIGLTSSLFILLLSLIVSESLLEYSGAKDKERRPNLFVLDIRAEQKEHFEEVAKEFGAE EEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCC KLIVAPVIGARLSKINGEVVKKDETESSALRRDWRSTARTREYFLSYRNEPYPTEKIVEG CEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC DFWRKGEEDQISIEKEFSTYLKVNLGDSLSFLVSGVEVTGVIRNFRTVNWADMRPNFVVL CCCCCCCCCCEEHHHHHHHEEEEECCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCCEEEE FSKGILEKEPSYYLSSLRIESEEKRYDLQRNLISKYPNLTIIDTDKAVRAFLGILEKISF EECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHH TIQLMTGLILGASLLLVLTALNSSRKERIEETTLLRIIGGTSVFLKKVFLWEGILLGTFS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FLLALFLAWIASILIGKQVLEIEMSYPFFEYLFVYIFTIFATTSVYYLNLRGEWKNPPVS HHHHHHHHHHHHHHHCHHHEEEEECCCHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCHH FMKAI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]