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The map label for this gene is ydjI [H]

Identifier: 45656381

GI number: 45656381

Start: 559699

End: 560691

Strand: Direct

Name: ydjI [H]

Synonym: LIC10483

Alternate gene names: 45656381

Gene position: 559699-560691 (Clockwise)

Preceding gene: 45656380

Following gene: 45656382

Centisome position: 13.09

GC content: 39.58

Gene sequence:

>993_bases
ATGGCATTGATTGATGTAATTAAATACGAAGGACAACCCGGAGAGATCGTTTGGAAATTTCCAAGAAACGATATTAGCTA
TTTTGGTCAACTCGTAGTAAATGAAAGTCAGGAAGCGGTCTTTTTTAAAGAAGGAAAAGCGTTAGACGTTTTTGGTCCGG
GAACTCATACTTTAAAAACCGGAAACATTCCTGTTTTGGAAAAACTCGTAAACTTGCCGTTTGGTGGACAAACTCCGTTT
ACTGCGGAAGTGGTTTATGTAAATAAGTCCGTGATCAATATGACTTGGGGAACTCCAGCTCCGATTCAGATTGAAGATCC
GAAATATCATATCACGTTGGGAGTTAGAGCATTCGGAAATTATAATATAAAAGTAATCGATTCTAAGTCTTTTGTTAACA
CTGTAGTCGGTACTCAACATAAATTTGATCATGACGGTGTGGATAAACTTTTGAAGCCGATGGTAGTAACTAGGCTTAGC
GATTTTATTTCCGAAGTCGTATTAAAAAATGGAGTTCCGATCACTCAAATTTCTCAACATCTCGAAGAAGCTTCTTCTGC
CGGAAAAACTAAAACTCAACCTGATTTTCAAAAATACGGTCTTGAGGTTGTAGACTTTTTTATCCAATCGATCAATTTCG
ATCAGAATGATCCTAACTTTCAGAAGATTCAGAAAGTTCTTACGGATAAATTTGAAATCGAAACGATGGGAAACATGTAT
CAGCAAAAGAGAATGTTGGACATTGGAGAGGCTGCAGCCAATAATCCAGGTGGTTCCGCAGGAGAAGGAATGAGCGCGGG
AATGGGCCTCGGAATGGGGATGAACATGGCGGGAATGATGGCGAATATGATGGGGCAAAATCAAGGCGGAGCAAAACCGG
CCGGAGAAGATGCAACTGCAAGACTTGCCAAGTTAAAATCTCTTTTGGACGGGGGGTTGATTACTCAAGAAGAATTTGAT
ACCAAAAAAAAGGACATTTTGAATTCTATCTAA

Upstream 100 bases:

>100_bases
GAAACTTTAAGATTTAGAACCAGGTCTTACCTTTTAAAAGAAATCGAAAAAATTGTATCATCTATAAATAATAAAATTTG
AATATAATAAGGAATGAATT

Downstream 100 bases:

>100_bases
AATATGATCTCTACTTTTACTCGATACAAAGCTGAATTTGAATGTATCAACGATTCCTGTAAAACCAGATATGATCTAAA
CGAAATCATTTATGAATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MALIDVIKYEGQPGEIVWKFPRNDISYFGQLVVNESQEAVFFKEGKALDVFGPGTHTLKTGNIPVLEKLVNLPFGGQTPF
TAEVVYVNKSVINMTWGTPAPIQIEDPKYHITLGVRAFGNYNIKVIDSKSFVNTVVGTQHKFDHDGVDKLLKPMVVTRLS
DFISEVVLKNGVPITQISQHLEEASSAGKTKTQPDFQKYGLEVVDFFIQSINFDQNDPNFQKIQKVLTDKFEIETMGNMY
QQKRMLDIGEAAANNPGGSAGEGMSAGMGLGMGMNMAGMMANMMGQNQGGAKPAGEDATARLAKLKSLLDGGLITQEEFD
TKKKDILNSI

Sequences:

>Translated_330_residues
MALIDVIKYEGQPGEIVWKFPRNDISYFGQLVVNESQEAVFFKEGKALDVFGPGTHTLKTGNIPVLEKLVNLPFGGQTPF
TAEVVYVNKSVINMTWGTPAPIQIEDPKYHITLGVRAFGNYNIKVIDSKSFVNTVVGTQHKFDHDGVDKLLKPMVVTRLS
DFISEVVLKNGVPITQISQHLEEASSAGKTKTQPDFQKYGLEVVDFFIQSINFDQNDPNFQKIQKVLTDKFEIETMGNMY
QQKRMLDIGEAAANNPGGSAGEGMSAGMGLGMGMNMAGMMANMMGQNQGGAKPAGEDATARLAKLKSLLDGGLITQEEFD
TKKKDILNSI
>Mature_329_residues
ALIDVIKYEGQPGEIVWKFPRNDISYFGQLVVNESQEAVFFKEGKALDVFGPGTHTLKTGNIPVLEKLVNLPFGGQTPFT
AEVVYVNKSVINMTWGTPAPIQIEDPKYHITLGVRAFGNYNIKVIDSKSFVNTVVGTQHKFDHDGVDKLLKPMVVTRLSD
FISEVVLKNGVPITQISQHLEEASSAGKTKTQPDFQKYGLEVVDFFIQSINFDQNDPNFQKIQKVLTDKFEIETMGNMYQ
QKRMLDIGEAAANNPGGSAGEGMSAGMGLGMGMNMAGMMANMMGQNQGGAKPAGEDATARLAKLKSLLDGGLITQEEFDT
KKKDILNSI

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 36149; Mature: 36018

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIDVIKYEGQPGEIVWKFPRNDISYFGQLVVNESQEAVFFKEGKALDVFGPGTHTLKT
CCCEEEEEECCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCEEEC
GNIPVLEKLVNLPFGGQTPFTAEVVYVNKSVINMTWGTPAPIQIEDPKYHITLGVRAFGN
CCCHHHHHHHCCCCCCCCCCEEEEEEEECEEEEEECCCCCCEEECCCCEEEEEEEEEECC
YNIKVIDSKSFVNTVVGTQHKFDHDGVDKLLKPMVVTRLSDFISEVVLKNGVPITQISQH
CEEEEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LEEASSAGKTKTQPDFQKYGLEVVDFFIQSINFDQNDPNFQKIQKVLTDKFEIETMGNMY
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QQKRMLDIGEAAANNPGGSAGEGMSAGMGLGMGMNMAGMMANMMGQNQGGAKPAGEDATA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHH
RLAKLKSLLDGGLITQEEFDTKKKDILNSI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALIDVIKYEGQPGEIVWKFPRNDISYFGQLVVNESQEAVFFKEGKALDVFGPGTHTLKT
CCEEEEEECCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCEEEC
GNIPVLEKLVNLPFGGQTPFTAEVVYVNKSVINMTWGTPAPIQIEDPKYHITLGVRAFGN
CCCHHHHHHHCCCCCCCCCCEEEEEEEECEEEEEECCCCCCEEECCCCEEEEEEEEEECC
YNIKVIDSKSFVNTVVGTQHKFDHDGVDKLLKPMVVTRLSDFISEVVLKNGVPITQISQH
CEEEEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LEEASSAGKTKTQPDFQKYGLEVVDFFIQSINFDQNDPNFQKIQKVLTDKFEIETMGNMY
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QQKRMLDIGEAAANNPGGSAGEGMSAGMGLGMGMNMAGMMANMMGQNQGGAKPAGEDATA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHH
RLAKLKSLLDGGLITQEEFDTKKKDILNSI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]