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The map label for this gene is 45656092

Identifier: 45656092

GI number: 45656092

Start: 213705

End: 215216

Strand: Direct

Name: 45656092

Synonym: LIC10187

Alternate gene names: NA

Gene position: 213705-215216 (Clockwise)

Preceding gene: 45656091

Following gene: 45656093

Centisome position: 5.0

GC content: 39.48

Gene sequence:

>1512_bases
ATGGATAAATTATCAGGAATCGAATTTCCAGGCGTAGGTAAAAGAGTTTTTCCAGAAGACTGGAAAAAAGAACAAGAATC
TAAAAGTCAAGAGATCATCAATCGAGATTTGGACCTTTTGGGATTTGGGATTCAGAATGGCGGGACGATTGTAATCGGTT
CGGGACCAAATCGTGTGGATTTAATTGATACTTTAATTGCTTATGACGAAGAAGGAAAAAGAATTCAAGTAACACCAATT
GCTGGAATTCCGGTTCCGAATAACGTTACTTGTACTCTCGTAGTTCGACATAAGTTTTTAGAAACACAATATGATAGTCC
TTCTAATCTTCCGAGTGATGGTACGAATTTATGGAGAGATAATTCTTTTGAGATTTTAACAAGACAAGGTTTGCTCGTTA
CCGGTGACGTTCCTTTGAGATTAATTTCGTCTAACGCTTCTGGAGTTGTAACCTTAGGTACCGACTTAAGAACTTGGAGA
GGAATTTTTACAAACAATATTAAAGACGGACAAATTACGGAAGAAAAACAAGCCTCTTCTGTAAAAACAGGATTGATTAC
AGATTTACACGCGGAGTTGATCGGAGCTATCAATCCGGATGTGAATCATCCTCTTAAACTTGTACAAGGAATTAACCAGA
CTTATCTATATTCTAAAAATTTTATAGACGTAACGTTCAAACAAGAACGTAAGTTTTTAGGAGAAATGTTTTGGATGGAC
GATTTAAAAAGTCCTTCCATTGATTTTCCTGCATTTTGTTTAGCTTCTCCGGATCAATTGATTAGTGTAAGTGGAACTGG
AGGAATGCCCGATTTAGTTTCGTATTGGCTCAATAAACCACTTCGTTATGATCCTTTGGGAAATAACATAACCGATTTTG
ATACAATCAGCTATACGATTTCGAGTAACGTTTTAACTGTAACTTTCCCTACCACAACTGCTTGTCAAAAAATCATCGAT
GCATTGGGAGAAGATTATCAAGTTCAGGGTTCTTTTACGAACTGGATGACTGGAACAATTTTGCAAACAATTGGTGGAAT
TCCGGCTAACTCTACTTTGGCGATTACTGCCTTTTCTTCTGCGAGTAGAACGATCAGTTTTAGTTGTACTGCGACGAATT
CAAGTGGATCACTTTCAGGAGTGAAGATCCGTTTTTATAAACATAGATTGCCGGACATTACTCCTGGAACTACGATTACC
AATCAGGTCCGTCATTTTACGGTTCAAGGAAGGGGATTTGTTTCTGTGATGGACTCTGATAGTGATTGGATTGGTGGTTT
GAGAAGAAGGGATCGGCTCCACGATCATGCTCACGATTTGCCCCAAACCGTTCCGAATAATACCACGACGAGCAGCACAC
CAGGCGGTGGACCGTACTGGATAGGAACAACTAGGATTTATACTACTGGTGGCGCCGTCGCCAATAACAACGGGTCCCCT
CGTACCGGAAAGACCACAGACGCCAGAGGTATATCAGGATTTCCTTATATATTTGTAAGGAGAGTTTTATAA

Upstream 100 bases:

>100_bases
ATTTTACAAATCGAAAATAATACAAAAACGAACGTGAATGTTCTTTATAACGAGTTAGAAGCGATTGTAATAGATTTTCC
GTCTTTCGAAGGAGATAATC

Downstream 100 bases:

>100_bases
GAAACTTTTTATGTTTTCTAACTAGTATTAAATACTACTTAAATTTGTATGATAGAGTGTCTTAAATTTTATGTTTTACT
GATCTCTATAAAATTGAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MDKLSGIEFPGVGKRVFPEDWKKEQESKSQEIINRDLDLLGFGIQNGGTIVIGSGPNRVDLIDTLIAYDEEGKRIQVTPI
AGIPVPNNVTCTLVVRHKFLETQYDSPSNLPSDGTNLWRDNSFEILTRQGLLVTGDVPLRLISSNASGVVTLGTDLRTWR
GIFTNNIKDGQITEEKQASSVKTGLITDLHAELIGAINPDVNHPLKLVQGINQTYLYSKNFIDVTFKQERKFLGEMFWMD
DLKSPSIDFPAFCLASPDQLISVSGTGGMPDLVSYWLNKPLRYDPLGNNITDFDTISYTISSNVLTVTFPTTTACQKIID
ALGEDYQVQGSFTNWMTGTILQTIGGIPANSTLAITAFSSASRTISFSCTATNSSGSLSGVKIRFYKHRLPDITPGTTIT
NQVRHFTVQGRGFVSVMDSDSDWIGGLRRRDRLHDHAHDLPQTVPNNTTTSSTPGGGPYWIGTTRIYTTGGAVANNNGSP
RTGKTTDARGISGFPYIFVRRVL

Sequences:

>Translated_503_residues
MDKLSGIEFPGVGKRVFPEDWKKEQESKSQEIINRDLDLLGFGIQNGGTIVIGSGPNRVDLIDTLIAYDEEGKRIQVTPI
AGIPVPNNVTCTLVVRHKFLETQYDSPSNLPSDGTNLWRDNSFEILTRQGLLVTGDVPLRLISSNASGVVTLGTDLRTWR
GIFTNNIKDGQITEEKQASSVKTGLITDLHAELIGAINPDVNHPLKLVQGINQTYLYSKNFIDVTFKQERKFLGEMFWMD
DLKSPSIDFPAFCLASPDQLISVSGTGGMPDLVSYWLNKPLRYDPLGNNITDFDTISYTISSNVLTVTFPTTTACQKIID
ALGEDYQVQGSFTNWMTGTILQTIGGIPANSTLAITAFSSASRTISFSCTATNSSGSLSGVKIRFYKHRLPDITPGTTIT
NQVRHFTVQGRGFVSVMDSDSDWIGGLRRRDRLHDHAHDLPQTVPNNTTTSSTPGGGPYWIGTTRIYTTGGAVANNNGSP
RTGKTTDARGISGFPYIFVRRVL
>Mature_503_residues
MDKLSGIEFPGVGKRVFPEDWKKEQESKSQEIINRDLDLLGFGIQNGGTIVIGSGPNRVDLIDTLIAYDEEGKRIQVTPI
AGIPVPNNVTCTLVVRHKFLETQYDSPSNLPSDGTNLWRDNSFEILTRQGLLVTGDVPLRLISSNASGVVTLGTDLRTWR
GIFTNNIKDGQITEEKQASSVKTGLITDLHAELIGAINPDVNHPLKLVQGINQTYLYSKNFIDVTFKQERKFLGEMFWMD
DLKSPSIDFPAFCLASPDQLISVSGTGGMPDLVSYWLNKPLRYDPLGNNITDFDTISYTISSNVLTVTFPTTTACQKIID
ALGEDYQVQGSFTNWMTGTILQTIGGIPANSTLAITAFSSASRTISFSCTATNSSGSLSGVKIRFYKHRLPDITPGTTIT
NQVRHFTVQGRGFVSVMDSDSDWIGGLRRRDRLHDHAHDLPQTVPNNTTTSSTPGGGPYWIGTTRIYTTGGAVANNNGSP
RTGKTTDARGISGFPYIFVRRVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55097; Mature: 55097

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLSGIEFPGVGKRVFPEDWKKEQESKSQEIINRDLDLLGFGIQNGGTIVIGSGPNRVD
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCHH
LIDTLIAYDEEGKRIQVTPIAGIPVPNNVTCTLVVRHKFLETQYDSPSNLPSDGTNLWRD
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCCCCC
NSFEILTRQGLLVTGDVPLRLISSNASGVVTLGTDLRTWRGIFTNNIKDGQITEEKQASS
CCEEEEEECCEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHH
VKTGLITDLHAELIGAINPDVNHPLKLVQGINQTYLYSKNFIDVTFKQERKFLGEMFWMD
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCEEEEEEHHHHHHHHHHHHHH
DLKSPSIDFPAFCLASPDQLISVSGTGGMPDLVSYWLNKPLRYDPLGNNITDFDTISYTI
CCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHCCCEEECCCCCCCCCCCEEEEEE
SSNVLTVTFPTTTACQKIIDALGEDYQVQGSFTNWMTGTILQTIGGIPANSTLAITAFSS
ECCEEEEEECCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECC
ASRTISFSCTATNSSGSLSGVKIRFYKHRLPDITPGTTITNQVRHFTVQGRGFVSVMDSD
CCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEEECCC
SDWIGGLRRRDRLHDHAHDLPQTVPNNTTTSSTPGGGPYWIGTTRIYTTGGAVANNNGSP
CHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCEEEEECEEEEECCCEEECCCCCC
RTGKTTDARGISGFPYIFVRRVL
CCCCCCCCCCCCCCHHHHHEECC
>Mature Secondary Structure
MDKLSGIEFPGVGKRVFPEDWKKEQESKSQEIINRDLDLLGFGIQNGGTIVIGSGPNRVD
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCHH
LIDTLIAYDEEGKRIQVTPIAGIPVPNNVTCTLVVRHKFLETQYDSPSNLPSDGTNLWRD
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCCCCC
NSFEILTRQGLLVTGDVPLRLISSNASGVVTLGTDLRTWRGIFTNNIKDGQITEEKQASS
CCEEEEEECCEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHH
VKTGLITDLHAELIGAINPDVNHPLKLVQGINQTYLYSKNFIDVTFKQERKFLGEMFWMD
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCEEEEEEHHHHHHHHHHHHHH
DLKSPSIDFPAFCLASPDQLISVSGTGGMPDLVSYWLNKPLRYDPLGNNITDFDTISYTI
CCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHCCCEEECCCCCCCCCCCEEEEEE
SSNVLTVTFPTTTACQKIIDALGEDYQVQGSFTNWMTGTILQTIGGIPANSTLAITAFSS
ECCEEEEEECCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECC
ASRTISFSCTATNSSGSLSGVKIRFYKHRLPDITPGTTITNQVRHFTVQGRGFVSVMDSD
CCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEEECCC
SDWIGGLRRRDRLHDHAHDLPQTVPNNTTTSSTPGGGPYWIGTTRIYTTGGAVANNNGSP
CHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCEEEEECEEEEECCCEEECCCCCC
RTGKTTDARGISGFPYIFVRRVL
CCCCCCCCCCCCCCHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA