| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is 45656091
Identifier: 45656091
GI number: 45656091
Start: 212990
End: 213712
Strand: Direct
Name: 45656091
Synonym: LIC10186
Alternate gene names: NA
Gene position: 212990-213712 (Clockwise)
Preceding gene: 45656090
Following gene: 45656092
Centisome position: 4.98
GC content: 34.85
Gene sequence:
>723_bases ATGGAAAAGATCTATGTTTATTCTTCTGAGTCTTTGGAAGAATATCCTTATTCCAATTTATCATCCATAGAATTGGAAGT AGAACTCTTCAACCGGGATAAATCAGAAGAGAAGAAGAAAAAAATTCATCAGGGAATTGCGTTTCCTCCGGAAGGTTTTA AATTTGAATGCGGAGCATTGAAGGAACTTTCTCTTTCAGAAAAGGCGGATCGAGGTTTGACTTCCGTTCCGGAAAATATG AAAATAGAGGAGGAAACGTTGGTTCCAAAAACGGAACTCGAACTTTTACAATGTGGTTTTTTGACGATTTCGGCTTATAA AGAAAAGAAGATTCAAAAAATCAAAACTAAGTTTGACGAAGCCATGGATCAAATCCTTTCCAAATATCCAAAGACGGAGC CACTTTCTTGGCCGATTTTGGCCCCACAGGCTAAAAGATGGATTTATGCAAGTGCTGAAGAAAAAGAGAGTCTTAAGTCT GAGTTCATTTCTTTAATAAGCGAATCTAAAAGTCAAAATGATGAAGATATTACAGAACTTGCAAGTTCTGTTTTGATTAA GTCGAATGCATATGAATCTTTCAGTGGTGTATGTAAAAAACTGAAAAGAGAAATGATTTTACAAATCGAAAATAATACAA AAACGAACGTGAATGTTCTTTATAACGAGTTAGAAGCGATTGTAATAGATTTTCCGTCTTTCGAAGGAGATAATCATGGA TAA
Upstream 100 bases:
>100_bases GAGCCGAAAAGATTAGAGAATATTCGGTTTATTAAATATACATATAATAAAATATTTTAATATTTTTAAAACTACTTAAT CACTCCTTCAAGGAGCATCA
Downstream 100 bases:
>100_bases ATTATCAGGAATCGAATTTCCAGGCGTAGGTAAAAGAGTTTTTCCAGAAGACTGGAAAAAAGAACAAGAATCTAAAAGTC AAGAGATCATCAATCGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MEKIYVYSSESLEEYPYSNLSSIELEVELFNRDKSEEKKKKIHQGIAFPPEGFKFECGALKELSLSEKADRGLTSVPENM KIEEETLVPKTELELLQCGFLTISAYKEKKIQKIKTKFDEAMDQILSKYPKTEPLSWPILAPQAKRWIYASAEEKESLKS EFISLISESKSQNDEDITELASSVLIKSNAYESFSGVCKKLKREMILQIENNTKTNVNVLYNELEAIVIDFPSFEGDNHG
Sequences:
>Translated_240_residues MEKIYVYSSESLEEYPYSNLSSIELEVELFNRDKSEEKKKKIHQGIAFPPEGFKFECGALKELSLSEKADRGLTSVPENM KIEEETLVPKTELELLQCGFLTISAYKEKKIQKIKTKFDEAMDQILSKYPKTEPLSWPILAPQAKRWIYASAEEKESLKS EFISLISESKSQNDEDITELASSVLIKSNAYESFSGVCKKLKREMILQIENNTKTNVNVLYNELEAIVIDFPSFEGDNHG >Mature_240_residues MEKIYVYSSESLEEYPYSNLSSIELEVELFNRDKSEEKKKKIHQGIAFPPEGFKFECGALKELSLSEKADRGLTSVPENM KIEEETLVPKTELELLQCGFLTISAYKEKKIQKIKTKFDEAMDQILSKYPKTEPLSWPILAPQAKRWIYASAEEKESLKS EFISLISESKSQNDEDITELASSVLIKSNAYESFSGVCKKLKREMILQIENNTKTNVNVLYNELEAIVIDFPSFEGDNHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27457; Mature: 27457
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIYVYSSESLEEYPYSNLSSIELEVELFNRDKSEEKKKKIHQGIAFPPEGFKFECGAL CCEEEEECCCCHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEECCCCH KELSLSEKADRGLTSVPENMKIEEETLVPKTELELLQCGFLTISAYKEKKIQKIKTKFDE HHCCCHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH AMDQILSKYPKTEPLSWPILAPQAKRWIYASAEEKESLKSEFISLISESKSQNDEDITEL HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHH ASSVLIKSNAYESFSGVCKKLKREMILQIENNTKTNVNVLYNELEAIVIDFPSFEGDNHG HHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHEEEEECCCCCCCCCC >Mature Secondary Structure MEKIYVYSSESLEEYPYSNLSSIELEVELFNRDKSEEKKKKIHQGIAFPPEGFKFECGAL CCEEEEECCCCHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEECCCCH KELSLSEKADRGLTSVPENMKIEEETLVPKTELELLQCGFLTISAYKEKKIQKIKTKFDE HHCCCHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH AMDQILSKYPKTEPLSWPILAPQAKRWIYASAEEKESLKSEFISLISESKSQNDEDITEL HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHH ASSVLIKSNAYESFSGVCKKLKREMILQIENNTKTNVNVLYNELEAIVIDFPSFEGDNHG HHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA