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The map label for this gene is 45656072

Identifier: 45656072

GI number: 45656072

Start: 196982

End: 197449

Strand: Reverse

Name: 45656072

Synonym: LIC10166

Alternate gene names: NA

Gene position: 197449-196982 (Counterclockwise)

Preceding gene: 304570507

Following gene: 45656071

Centisome position: 4.62

GC content: 32.26

Gene sequence:

>468_bases
ATGATAGATCTGGAAAAAATCAAAAGATATATCGTAAACGGTGAAGTCGTTCATAAAGGAGAATTCTGGAGAAGAGGAAG
AAAACTTTCTCAGAGATTGGAACAAATAGTCATAGAGTCAAAACTCAATCTAAGAGATATAGCTTTCAAATACTCGGCAA
AAATCGAAGAGGGGACTCAATGTGGTCCACTATACCGCGAACATCTTGCAGACGTAATAAAAGGAATCAGGAATACAAAA
CGTTATGTGAAAGCAATCGAAGAATCATGGGGACTTCCTATAGAAACGATCCGCTCCATTTATCGAGAAGACAAAGAAAC
AGAAAAAAGAATGGAAAAGTTAGATTCTAATTCAATTCAAGAATTTGCGATTTGGTATAAAAATATTTTAAATTCTAAAA
AAGAAACTTATAATATTATAAAAATTGCAAATATAGAGGACCAAAATGTAAGTGAAATTGCAATCTAA

Upstream 100 bases:

>100_bases
TAAACCTTTGATTTCTCTTTCCGATAAAATTCGTTCGTTTCATGCAAACAACGAAAAATCCGCGTTACACGAAGAGCCAA
AAGGAGCAGCGTAAAATCAA

Downstream 100 bases:

>100_bases
AAACGAAAATTGCAATTTCATTCAGGAGAATTTAAAATGATAAAACAAAAATCTATAAAATCGAAAATTCAAAAAAACAA
AAAGAAACCTTCTGTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIDLEKIKRYIVNGEVVHKGEFWRRGRKLSQRLEQIVIESKLNLRDIAFKYSAKIEEGTQCGPLYREHLADVIKGIRNTK
RYVKAIEESWGLPIETIRSIYREDKETEKRMEKLDSNSIQEFAIWYKNILNSKKETYNIIKIANIEDQNVSEIAI

Sequences:

>Translated_155_residues
MIDLEKIKRYIVNGEVVHKGEFWRRGRKLSQRLEQIVIESKLNLRDIAFKYSAKIEEGTQCGPLYREHLADVIKGIRNTK
RYVKAIEESWGLPIETIRSIYREDKETEKRMEKLDSNSIQEFAIWYKNILNSKKETYNIIKIANIEDQNVSEIAI
>Mature_155_residues
MIDLEKIKRYIVNGEVVHKGEFWRRGRKLSQRLEQIVIESKLNLRDIAFKYSAKIEEGTQCGPLYREHLADVIKGIRNTK
RYVKAIEESWGLPIETIRSIYREDKETEKRMEKLDSNSIQEFAIWYKNILNSKKETYNIIKIANIEDQNVSEIAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18360; Mature: 18360

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLEKIKRYIVNGEVVHKGEFWRRGRKLSQRLEQIVIESKLNLRDIAFKYSAKIEEGTQ
CCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
CGPLYREHLADVIKGIRNTKRYVKAIEESWGLPIETIRSIYREDKETEKRMEKLDSNSIQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHH
EFAIWYKNILNSKKETYNIIKIANIEDQNVSEIAI
HHHHHHHHHHCCHHHHHHHEEEECCCCCCCHHHCC
>Mature Secondary Structure
MIDLEKIKRYIVNGEVVHKGEFWRRGRKLSQRLEQIVIESKLNLRDIAFKYSAKIEEGTQ
CCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
CGPLYREHLADVIKGIRNTKRYVKAIEESWGLPIETIRSIYREDKETEKRMEKLDSNSIQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHH
EFAIWYKNILNSKKETYNIIKIANIEDQNVSEIAI
HHHHHHHHHHCCHHHHHHHEEEECCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA