Click here to switch to the map view.

The map label for this gene is 45656071

Identifier: 45656071

GI number: 45656071

Start: 196365

End: 196787

Strand: Reverse

Name: 45656071

Synonym: LIC10165

Alternate gene names: NA

Gene position: 196787-196365 (Counterclockwise)

Preceding gene: 45656072

Following gene: 45656070

Centisome position: 4.6

GC content: 31.91

Gene sequence:

>423_bases
ATGTTAAAATCAAAAGATTCGCCTAACAAAACAATTCGTATGGAATTACCAAATAATCGATACAAAGAACGTCCCGACAT
AGCTCTGGCCGTTCAACAAATCGGAGAAATTAAAAGGGAAAAAGATAGAATCAAAAGTAAAACAGACGACCAAATTGCCA
AACTACTATTAGATCTTCAGAACGAAATGGATCCTTTGGATTTAAAAATCCAACATTTAGTTTCTGGAATTAAATTTTAT
GTAGATCACCATTTAGAAGAACTATTTCCAAATCCAGAATACAAAACCTGTAAACTGGCAACTGGAACTTTAAAACTTCG
TAAAGTTCCACCTTCAGTAAAAACCAGAGGAACGGCAAAATTTTACGAAAAAGTTTTAACCGATAATAATCTTTTAGAAA
AGTTCAACAATCTGGTAAATTAA

Upstream 100 bases:

>100_bases
TAAAAAAAATCCCTTCCGTTGCAGTATTATCTTCATCGACTAACGCAATTGCTGTAGATATGACACCACAAAAAGCCAAA
CCGTCCAATTAGGAGGAAAG

Downstream 100 bases:

>100_bases
GCGGAGTTTATCTAAGAATCAAACTAGAATTAAATAAAGAGCAAATACTGGCCGAACCAATAAAGGCAATACAAAAGCTT
GGAATTCAATTAAACGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLKSKDSPNKTIRMELPNNRYKERPDIALAVQQIGEIKREKDRIKSKTDDQIAKLLLDLQNEMDPLDLKIQHLVSGIKFY
VDHHLEELFPNPEYKTCKLATGTLKLRKVPPSVKTRGTAKFYEKVLTDNNLLEKFNNLVN

Sequences:

>Translated_140_residues
MLKSKDSPNKTIRMELPNNRYKERPDIALAVQQIGEIKREKDRIKSKTDDQIAKLLLDLQNEMDPLDLKIQHLVSGIKFY
VDHHLEELFPNPEYKTCKLATGTLKLRKVPPSVKTRGTAKFYEKVLTDNNLLEKFNNLVN
>Mature_140_residues
MLKSKDSPNKTIRMELPNNRYKERPDIALAVQQIGEIKREKDRIKSKTDDQIAKLLLDLQNEMDPLDLKIQHLVSGIKFY
VDHHLEELFPNPEYKTCKLATGTLKLRKVPPSVKTRGTAKFYEKVLTDNNLLEKFNNLVN

Specific function: Unknown

COG id: COG4396

COG function: function code R; Mu-like prophage host-nuclease inhibitor protein Gam

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16274; Mature: 16274

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSKDSPNKTIRMELPNNRYKERPDIALAVQQIGEIKREKDRIKSKTDDQIAKLLLDLQ
CCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NEMDPLDLKIQHLVSGIKFYVDHHLEELFPNPEYKTCKLATGTLKLRKVPPSVKTRGTAK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCCCCCHHH
FYEKVLTDNNLLEKFNNLVN
HHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MLKSKDSPNKTIRMELPNNRYKERPDIALAVQQIGEIKREKDRIKSKTDDQIAKLLLDLQ
CCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NEMDPLDLKIQHLVSGIKFYVDHHLEELFPNPEYKTCKLATGTLKLRKVPPSVKTRGTAK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCCCCCHHH
FYEKVLTDNNLLEKFNNLVN
HHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA