Click here to switch to the map view.

The map label for this gene is 45656055

Identifier: 45656055

GI number: 45656055

Start: 173959

End: 175332

Strand: Direct

Name: 45656055

Synonym: LIC10145

Alternate gene names: NA

Gene position: 173959-175332 (Clockwise)

Preceding gene: 45656054

Following gene: 45656056

Centisome position: 4.07

GC content: 34.28

Gene sequence:

>1374_bases
ATGAAAACGGAATTAGACGATATAGAACGTTTTGAAGACCTTTTAGGAAGGTACTTATACGGTGAATTGAATGCCGAAGA
TAAGCGTGAACTTCTTCAATTCGTGCTTAAAAATGAAAGAGCTCGTTCTATGTACCAAAGTTCTACTCGAACTAATTCTA
TTCTATCTCGTACTTTTTCTGATATTAAACAAACCCCTCATTTAAAATCGAGTATTCAGAAAAAGATTTTAGAATTTCCG
AATACGATTTTAAAATCTCGTTCTTTGGTTTTAGGACTTACGGCGGCCATGTTATTTTTAGTCGTAGGTGTTTCTTTTTG
GTTTAAATATCAATTTGAGTTGGATTCTAAATTAGATCAGGTTTTTATCAATTCTTACGGAGATTGTAAAATCGACGGTG
TAGCGTCTCAACCTGGAGAGAGTCTGCTCAATCGTAAATTAGTTTCTGGTAATTTTTCTATTTGTGAATTTCAAGTAGAG
GGGGCTCAAAGTGTTGCGGTTCGAATGTTGCCAGATTCTGAAGTTTCCGTTACTGGAGATAAAAAGTATTCTTCTTTGAA
TGTGGCTCGAGGGTCGGTTCTGGTAGATTCAATTCAGAACGAATCTACCGGGGAAGGTCTACTTGCGATTCTTTCACCGG
ATGTGAGAGCCTTTTTAGCAGGAACGAAAGTGATTTATTCCAGAAATGTGGGAGAATCCTATTCTAAACTGGATATAGAT
GTTTTGGATGGAAAAGTAGAAGTTGAAACAGGACCTTTGATTGCTTTTGAAAAAACCGCCAGCACTTTAACAAAAGAGGA
AAAAGAATTTTTAAAAATGAATTTTCCGATTCTTTTTCAAAGCAGAAAAGTTCAGGTAAATCGGGGACAATCTTTGTCTT
GGAAAGGAATCCCGGAATCTAGTTTAAATAAAATTCGTTCTTTAGAAAAAAGTATTGAAGAAGCAAAATCCCAAGGTTTG
AAATTAGAAGAGGATTTTGTCTTCGCATTAAATTCGGACGTTCGTAGGCTCGGGAACGAGAATACAATCGGGATGTTTTC
TATGGAAGAGGATCTAAATAAAAAAATTAAGAATATTCTTCCAAATCAAGAAAAAGAATTAGAAGAGAAATTCAAATCTA
TGGTTCGTTTTGCTCCGAGCGATTTGAAACAAGTCGAAAAGTTGAAGTCCTTAGTTGCAAAATTGGATAATACGGCCTTA
ATTCAAATTTTAAAAGATAAAAATCAGCCTGATCATGAAAGAGTAATTCATTTTAAAGATGGTTCTCAAGTAAAAGGTTT
TATATATCAACACGAAAGTTTTTATATTCTTCTAAAGAATGATGGAAATCTTTTATTTCCTATTGATGCAGTCGATTCAA
TCCATTTCGAATAA

Upstream 100 bases:

>100_bases
GGGAATTTCGGAAAGAACGGTAAGTAGGAGATTAATTTCTGCTATTTCTTTACTGAGAACAAAATTAGAACAGCAAGGAT
TTCAATTCTAAACTTCTATT

Downstream 100 bases:

>100_bases
CACTGATTTGTCGATTTTATTCCCGATCAAAAACGGATAAACTTCTTGGATTTGTTCATTTTAACTTCTTTTTTTGGTTA
TCTAAAAGAATGTAGTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MKTELDDIERFEDLLGRYLYGELNAEDKRELLQFVLKNERARSMYQSSTRTNSILSRTFSDIKQTPHLKSSIQKKILEFP
NTILKSRSLVLGLTAAMLFLVVGVSFWFKYQFELDSKLDQVFINSYGDCKIDGVASQPGESLLNRKLVSGNFSICEFQVE
GAQSVAVRMLPDSEVSVTGDKKYSSLNVARGSVLVDSIQNESTGEGLLAILSPDVRAFLAGTKVIYSRNVGESYSKLDID
VLDGKVEVETGPLIAFEKTASTLTKEEKEFLKMNFPILFQSRKVQVNRGQSLSWKGIPESSLNKIRSLEKSIEEAKSQGL
KLEEDFVFALNSDVRRLGNENTIGMFSMEEDLNKKIKNILPNQEKELEEKFKSMVRFAPSDLKQVEKLKSLVAKLDNTAL
IQILKDKNQPDHERVIHFKDGSQVKGFIYQHESFYILLKNDGNLLFPIDAVDSIHFE

Sequences:

>Translated_457_residues
MKTELDDIERFEDLLGRYLYGELNAEDKRELLQFVLKNERARSMYQSSTRTNSILSRTFSDIKQTPHLKSSIQKKILEFP
NTILKSRSLVLGLTAAMLFLVVGVSFWFKYQFELDSKLDQVFINSYGDCKIDGVASQPGESLLNRKLVSGNFSICEFQVE
GAQSVAVRMLPDSEVSVTGDKKYSSLNVARGSVLVDSIQNESTGEGLLAILSPDVRAFLAGTKVIYSRNVGESYSKLDID
VLDGKVEVETGPLIAFEKTASTLTKEEKEFLKMNFPILFQSRKVQVNRGQSLSWKGIPESSLNKIRSLEKSIEEAKSQGL
KLEEDFVFALNSDVRRLGNENTIGMFSMEEDLNKKIKNILPNQEKELEEKFKSMVRFAPSDLKQVEKLKSLVAKLDNTAL
IQILKDKNQPDHERVIHFKDGSQVKGFIYQHESFYILLKNDGNLLFPIDAVDSIHFE
>Mature_457_residues
MKTELDDIERFEDLLGRYLYGELNAEDKRELLQFVLKNERARSMYQSSTRTNSILSRTFSDIKQTPHLKSSIQKKILEFP
NTILKSRSLVLGLTAAMLFLVVGVSFWFKYQFELDSKLDQVFINSYGDCKIDGVASQPGESLLNRKLVSGNFSICEFQVE
GAQSVAVRMLPDSEVSVTGDKKYSSLNVARGSVLVDSIQNESTGEGLLAILSPDVRAFLAGTKVIYSRNVGESYSKLDID
VLDGKVEVETGPLIAFEKTASTLTKEEKEFLKMNFPILFQSRKVQVNRGQSLSWKGIPESSLNKIRSLEKSIEEAKSQGL
KLEEDFVFALNSDVRRLGNENTIGMFSMEEDLNKKIKNILPNQEKELEEKFKSMVRFAPSDLKQVEKLKSLVAKLDNTAL
IQILKDKNQPDHERVIHFKDGSQVKGFIYQHESFYILLKNDGNLLFPIDAVDSIHFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51758; Mature: 51758

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTELDDIERFEDLLGRYLYGELNAEDKRELLQFVLKNERARSMYQSSTRTNSILSRTFS
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
DIKQTPHLKSSIQKKILEFPNTILKSRSLVLGLTAAMLFLVVGVSFWFKYQFELDSKLDQ
HHHHCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHH
VFINSYGDCKIDGVASQPGESLLNRKLVSGNFSICEFQVEGAQSVAVRMLPDSEVSVTGD
HHHCCCCCEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCEEEECC
KKYSSLNVARGSVLVDSIQNESTGEGLLAILSPDVRAFLAGTKVIYSRNVGESYSKLDID
CCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHCCCEEEECCCCCCHHHEEEE
VLDGKVEVETGPLIAFEKTASTLTKEEKEFLKMNFPILFQSRKVQVNRGQSLSWKGIPES
EECCEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCHH
SLNKIRSLEKSIEEAKSQGLKLEEDFVFALNSDVRRLGNENTIGMFSMEEDLNKKIKNIL
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCCCCEEEEECHHHHHHHHHHHC
PNQEKELEEKFKSMVRFAPSDLKQVEKLKSLVAKLDNTALIQILKDKNQPDHERVIHFKD
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHCEEEECC
GSQVKGFIYQHESFYILLKNDGNLLFPIDAVDSIHFE
CCCEEEEEEECCEEEEEEECCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MKTELDDIERFEDLLGRYLYGELNAEDKRELLQFVLKNERARSMYQSSTRTNSILSRTFS
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
DIKQTPHLKSSIQKKILEFPNTILKSRSLVLGLTAAMLFLVVGVSFWFKYQFELDSKLDQ
HHHHCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHH
VFINSYGDCKIDGVASQPGESLLNRKLVSGNFSICEFQVEGAQSVAVRMLPDSEVSVTGD
HHHCCCCCEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCEEEECC
KKYSSLNVARGSVLVDSIQNESTGEGLLAILSPDVRAFLAGTKVIYSRNVGESYSKLDID
CCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHCCCEEEECCCCCCHHHEEEE
VLDGKVEVETGPLIAFEKTASTLTKEEKEFLKMNFPILFQSRKVQVNRGQSLSWKGIPES
EECCEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCHH
SLNKIRSLEKSIEEAKSQGLKLEEDFVFALNSDVRRLGNENTIGMFSMEEDLNKKIKNIL
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCCCCEEEEECHHHHHHHHHHHC
PNQEKELEEKFKSMVRFAPSDLKQVEKLKSLVAKLDNTALIQILKDKNQPDHERVIHFKD
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHCEEEECC
GSQVKGFIYQHESFYILLKNDGNLLFPIDAVDSIHFE
CCCEEEEEEECCEEEEEEECCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA