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The map label for this gene is dcd

Identifier: 45655979

GI number: 45655979

Start: 84344

End: 84865

Strand: Reverse

Name: dcd

Synonym: LIC10065

Alternate gene names: 45655979

Gene position: 84865-84344 (Counterclockwise)

Preceding gene: 45655980

Following gene: 45655978

Centisome position: 1.98

GC content: 35.06

Gene sequence:

>522_bases
ATGATTCTTACTGGAAAAGAAATTCAAAAACGAATCGGTAATGATATTGTAATTACTCCTTATTCAGAAAAACAACTCAA
TCCAAATTCTTACAATCTAAGACTTCATGAGGAACTTCTAGTATACACCGAACTTCCTCTGGATATGAAAAAACCAAATC
CGGCCGAAAAGTTGGTAATTCCTGAATCAGGTCTTTTATTAAAACCAGGTATATTGTATTTAGGTAGAACCTTAGAATCC
ACCGAAACTCACAATTTAGTACCTATGCTTGAAGGACGATCTTCTATTGGAAGATTAGGAATGCTCGTTCATGTAACTGC
AGGATTTGGTGACGTAGGTTTTAAGGGATTTTGGACTTTAGAAATTTCGGTTATCCAACCCCTCATCGTTTATCCAGGTG
TGGAAGTTTGTCAGATTTTTTATCATACACTAGAAGGACAGATAACGGAATATACTTCCGGAAAATACCAAGCCAATCGA
GGAATTCAAACTTCTATGTTATATAAGGATTTTGAAAAATAG

Upstream 100 bases:

>100_bases
CGAGAGTAAATACTATAATAACACTTTAAATACGGAAGATCGGTTGGAGGCACTCAAAGCGTTTCAGGAAAAACGAAAAC
CGATTTTTAAAGGAAAATAA

Downstream 100 bases:

>100_bases
GGATCCTTTCTTTTTTGTTGACTTTCTTCGTATTCTTTTGAGAATTTTGTCCGCAAAACACTCTTGGAGAATGGAATGAA
TAAGTCTAAGTTGATCGCAA

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MILTGKEIQKRIGNDIVITPYSEKQLNPNSYNLRLHEELLVYTELPLDMKKPNPAEKLVIPESGLLLKPGILYLGRTLES
TETHNLVPMLEGRSSIGRLGMLVHVTAGFGDVGFKGFWTLEISVIQPLIVYPGVEVCQIFYHTLEGQITEYTSGKYQANR
GIQTSMLYKDFEK

Sequences:

>Translated_173_residues
MILTGKEIQKRIGNDIVITPYSEKQLNPNSYNLRLHEELLVYTELPLDMKKPNPAEKLVIPESGLLLKPGILYLGRTLES
TETHNLVPMLEGRSSIGRLGMLVHVTAGFGDVGFKGFWTLEISVIQPLIVYPGVEVCQIFYHTLEGQITEYTSGKYQANR
GIQTSMLYKDFEK
>Mature_173_residues
MILTGKEIQKRIGNDIVITPYSEKQLNPNSYNLRLHEELLVYTELPLDMKKPNPAEKLVIPESGLLLKPGILYLGRTLES
TETHNLVPMLEGRSSIGRLGMLVHVTAGFGDVGFKGFWTLEISVIQPLIVYPGVEVCQIFYHTLEGQITEYTSGKYQANR
GIQTSMLYKDFEK

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962 [H]

Pfam domain/function: NA

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 19528; Mature: 19528

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTGKEIQKRIGNDIVITPYSEKQLNPNSYNLRLHEELLVYTELPLDMKKPNPAEKLVI
CCCCCHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEE
PESGLLLKPGILYLGRTLESTETHNLVPMLEGRSSIGRLGMLVHVTAGFGDVGFKGFWTL
CCCCCEECCCCEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEE
EISVIQPLIVYPGVEVCQIFYHTLEGQITEYTSGKYQANRGIQTSMLYKDFEK
EEEEECHHHHCCCHHHHHHHHHHHCCEEEECCCCCEECCCCCCHHHHHHHCCC
>Mature Secondary Structure
MILTGKEIQKRIGNDIVITPYSEKQLNPNSYNLRLHEELLVYTELPLDMKKPNPAEKLVI
CCCCCHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEE
PESGLLLKPGILYLGRTLESTETHNLVPMLEGRSSIGRLGMLVHVTAGFGDVGFKGFWTL
CCCCCEECCCCEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEE
EISVIQPLIVYPGVEVCQIFYHTLEGQITEYTSGKYQANRGIQTSMLYKDFEK
EEEEECHHHHCCCHHHHHHHHHHHCCEEEECCCCCEECCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA