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The map label for this gene is flaD [H]

Identifier: 45359233

GI number: 45359233

Start: 1612512

End: 1613480

Strand: Direct

Name: flaD [H]

Synonym: MMP1670

Alternate gene names: 45359233

Gene position: 1612512-1613480 (Clockwise)

Preceding gene: 45359232

Following gene: 45359234

Centisome position: 97.07

GC content: 34.16

Gene sequence:

>969_bases
ATGATTGGTAACGTTAAAATGGAATATGCTTCCGCTTCGGAAGAATACCTTACCGAGAGTGAAATGGATGAATATTTGGA
TGATTTGAGATCCAAAATTCCTTCATTTATCGTAGAACTCTTAAAAAATAATTTAAAAAACAGAAAATTAACAAGACCTC
AGCTTGATAAAATCGTTGGAAGAGTTTCTGACCTTTATTTTGGAAAAAAACCGGAAGACAAGAAGGCTGCAGAACTTACA
AATAAAATTAACGATTTAAGCCAGAAATTAGATGCTTTGATGAAAGTTGCTACAATTTCATCTGCAACAAAAGTTTCTGA
TGACATTAAAAAAGAATTGAACTATCTCGATGATGAAAAAATTGAAGTTCCCGAAATTTCTAAAGCTGTAGAAGTTCCAG
AAATTATCGAAGAACCTGAAATTTCAATTGAACCTGTTGAGGAACCCGTTGTGGAGCCTGTAAAAATAATTGAAAAACAG
ACTGTTGAACCAATCATTGAGTTCAAAGAAGAACCTAAAATTGAAAAGGTTGTTTCGAAAGTTCCTTTGGAAATTGAGGA
GGGAAATAATATGAGACCTGAATTAACCCCTGCAGTTGAAACGACTGCGAGACTTCAAGAATTGCCCGAAGATACACTTT
CTACCATGTTAGTATTCAAATGGCTTGAATTTTTAATTAGTAGAGTGGGAACAGGAAATTTAATAGATGTACTTGATTAC
TACCACAACCTTGGATGGGTATCTGGAAAAGCAATCAGCAAATTGATGAAAGTATCAAAAAACATGAAATATTTCCATGA
AGATATCGACTGGAAAGCTAATGAATGCATGGCTCCAGAAGACCACGTTGTATCATTACTCTACATTGAAAAATTAGCAG
GAAGGCCTATCGCAGTTGAAGAACTTGAAGGCATGGAAAGAGAAATAAACAGAATAAAGAAATGGGCTGAAGAACTACAA
AAAATGTAA

Upstream 100 bases:

>100_bases
AACGTATATTTAAATACGCACCAAATTGACCTTGATGGAGTTATTAATGAAGTGCTTGCAGAAGAAGAATTCTCCAAAGC
AATATCAGGAGAGGATTCCG

Downstream 100 bases:

>100_bases
TTTAAGTAACTACAAGGAGTGAGCGAAATGAACACTGCAGCATTATCATCAATATTACTCGAATCCCAAAAGCCTGCTAA
ATTAGAAGCTGTTCCAGAAG

Product: flagella protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MIGNVKMEYASASEEYLTESEMDEYLDDLRSKIPSFIVELLKNNLKNRKLTRPQLDKIVGRVSDLYFGKKPEDKKAAELT
NKINDLSQKLDALMKVATISSATKVSDDIKKELNYLDDEKIEVPEISKAVEVPEIIEEPEISIEPVEEPVVEPVKIIEKQ
TVEPIIEFKEEPKIEKVVSKVPLEIEEGNNMRPELTPAVETTARLQELPEDTLSTMLVFKWLEFLISRVGTGNLIDVLDY
YHNLGWVSGKAISKLMKVSKNMKYFHEDIDWKANECMAPEDHVVSLLYIEKLAGRPIAVEELEGMEREINRIKKWAEELQ
KM

Sequences:

>Translated_322_residues
MIGNVKMEYASASEEYLTESEMDEYLDDLRSKIPSFIVELLKNNLKNRKLTRPQLDKIVGRVSDLYFGKKPEDKKAAELT
NKINDLSQKLDALMKVATISSATKVSDDIKKELNYLDDEKIEVPEISKAVEVPEIIEEPEISIEPVEEPVVEPVKIIEKQ
TVEPIIEFKEEPKIEKVVSKVPLEIEEGNNMRPELTPAVETTARLQELPEDTLSTMLVFKWLEFLISRVGTGNLIDVLDY
YHNLGWVSGKAISKLMKVSKNMKYFHEDIDWKANECMAPEDHVVSLLYIEKLAGRPIAVEELEGMEREINRIKKWAEELQ
KM
>Mature_322_residues
MIGNVKMEYASASEEYLTESEMDEYLDDLRSKIPSFIVELLKNNLKNRKLTRPQLDKIVGRVSDLYFGKKPEDKKAAELT
NKINDLSQKLDALMKVATISSATKVSDDIKKELNYLDDEKIEVPEISKAVEVPEIIEEPEISIEPVEEPVVEPVKIIEKQ
TVEPIIEFKEEPKIEKVVSKVPLEIEEGNNMRPELTPAVETTARLQELPEDTLSTMLVFKWLEFLISRVGTGNLIDVLDY
YHNLGWVSGKAISKLMKVSKNMKYFHEDIDWKANECMAPEDHVVSLLYIEKLAGRPIAVEELEGMEREINRIKKWAEELQ
KM

Specific function: Unknown

COG id: COG3351

COG function: function code N; Putative archaeal flagellar protein D/E

Gene ontology:

Cell location: Archaeal flagellum (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii flaD, also to flaE [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006752
- InterPro:   IPR016682
- ProDom:   PD012942 [H]

Pfam domain/function: PF04659 Arch_fla_DE [H]

EC number: NA

Molecular weight: Translated: 36979; Mature: 36979

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGNVKMEYASASEEYLTESEMDEYLDDLRSKIPSFIVELLKNNLKNRKLTRPQLDKIVG
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RVSDLYFGKKPEDKKAAELTNKINDLSQKLDALMKVATISSATKVSDDIKKELNYLDDEK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IEVPEISKAVEVPEIIEEPEISIEPVEEPVVEPVKIIEKQTVEPIIEFKEEPKIEKVVSK
CCCCHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VPLEIEEGNNMRPELTPAVETTARLQELPEDTLSTMLVFKWLEFLISRVGTGNLIDVLDY
CCCEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YHNLGWVSGKAISKLMKVSKNMKYFHEDIDWKANECMAPEDHVVSLLYIEKLAGRPIAVE
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH
ELEGMEREINRIKKWAEELQKM
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGNVKMEYASASEEYLTESEMDEYLDDLRSKIPSFIVELLKNNLKNRKLTRPQLDKIVG
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RVSDLYFGKKPEDKKAAELTNKINDLSQKLDALMKVATISSATKVSDDIKKELNYLDDEK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IEVPEISKAVEVPEIIEEPEISIEPVEEPVVEPVKIIEKQTVEPIIEFKEEPKIEKVVSK
CCCCHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VPLEIEEGNNMRPELTPAVETTARLQELPEDTLSTMLVFKWLEFLISRVGTGNLIDVLDY
CCCEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YHNLGWVSGKAISKLMKVSKNMKYFHEDIDWKANECMAPEDHVVSLLYIEKLAGRPIAVE
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH
ELEGMEREINRIKKWAEELQKM
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA