Click here to switch to the map view.

The map label for this gene is flaC [H]

Identifier: 45359232

GI number: 45359232

Start: 1611962

End: 1612522

Strand: Direct

Name: flaC [H]

Synonym: MMP1669

Alternate gene names: 45359232

Gene position: 1611962-1612522 (Clockwise)

Preceding gene: 45359231

Following gene: 45359233

Centisome position: 97.04

GC content: 35.47

Gene sequence:

>561_bases
ATGCCTAATATCTCAGAGATTATTGAAGAGATAAAAAAGAAGATCAAATTAGGCAAGAAGACTGAAGAAAGTTCAGAACC
TGAACCTGATGACGAATTTAGTTTTACACTTGAAGAGGAAGCAGTAAACGAATCTGAAGATTTGTTTGCTGCAAATGAAG
AACTTCTTGCCAAAATTGGGGAACTTGAATCCAAGTTCCCAAAAATTGAAATGATGGTCACTAACCTGAGGAAAGAGAAT
GAAAACCTCAGGGGTGACATTCAAAATATTAACGAAAATTTTCAGGATATGATGGCACTTTACGAAGTGGTATCTAATCA
AATCAATCCATTCATAGGCATTTCAAAAATCACAGCAACCAGCATGGAAAAAGTAGAAATGATGGAAAATGAATCTCGAA
ACCTGAAAAAAAGGGTTGAAGAACTTCAAAACGATGTTGTGATTCTGGCAAACGTATATTTAAATACGCACCAAATTGAC
CTTGATGGAGTTATTAATGAAGTGCTTGCAGAAGAAGAATTCTCCAAAGCAATATCAGGAGAGGATTCCGATGATTGGTA
A

Upstream 100 bases:

>100_bases
GGAGAAGTAATCCCTGATTACGGTGCTTCGGGAATCGTTGAATTTAGAGCTCCATCAGTATTTACTGAAACAGTAGTTAC
ACTTCAATAATGGTGATATT

Downstream 100 bases:

>100_bases
CGTTAAAATGGAATATGCTTCCGCTTCGGAAGAATACCTTACCGAGAGTGAAATGGATGAATATTTGGATGATTTGAGAT
CCAAAATTCCTTCATTTATC

Product: flagella accessory C family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MPNISEIIEEIKKKIKLGKKTEESSEPEPDDEFSFTLEEEAVNESEDLFAANEELLAKIGELESKFPKIEMMVTNLRKEN
ENLRGDIQNINENFQDMMALYEVVSNQINPFIGISKITATSMEKVEMMENESRNLKKRVEELQNDVVILANVYLNTHQID
LDGVINEVLAEEEFSKAISGEDSDDW

Sequences:

>Translated_186_residues
MPNISEIIEEIKKKIKLGKKTEESSEPEPDDEFSFTLEEEAVNESEDLFAANEELLAKIGELESKFPKIEMMVTNLRKEN
ENLRGDIQNINENFQDMMALYEVVSNQINPFIGISKITATSMEKVEMMENESRNLKKRVEELQNDVVILANVYLNTHQID
LDGVINEVLAEEEFSKAISGEDSDDW
>Mature_185_residues
PNISEIIEEIKKKIKLGKKTEESSEPEPDDEFSFTLEEEAVNESEDLFAANEELLAKIGELESKFPKIEMMVTNLRKENE
NLRGDIQNINENFQDMMALYEVVSNQINPFIGISKITATSMEKVEMMENESRNLKKRVEELQNDVVILANVYLNTHQIDL
DGVINEVLAEEEFSKAISGEDSDDW

Specific function: Unknown

COG id: COG3352

COG function: function code N; Putative archaeal flagellar protein C

Gene ontology:

Cell location: Archaeal flagellum (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii flaC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009205
- InterPro:   IPR008039 [H]

Pfam domain/function: PF05377 FlaC_arch [H]

EC number: NA

Molecular weight: Translated: 21320; Mature: 21189

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNISEIIEEIKKKIKLGKKTEESSEPEPDDEFSFTLEEEAVNESEDLFAANEELLAKIG
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHH
ELESKFPKIEMMVTNLRKENENLRGDIQNINENFQDMMALYEVVSNQINPFIGISKITAT
HHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SMEKVEMMENESRNLKKRVEELQNDVVILANVYLNTHQIDLDGVINEVLAEEEFSKAISG
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEECHHHHHHHHHHHHHHHHHHCC
EDSDDW
CCCCCC
>Mature Secondary Structure 
PNISEIIEEIKKKIKLGKKTEESSEPEPDDEFSFTLEEEAVNESEDLFAANEELLAKIG
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHH
ELESKFPKIEMMVTNLRKENENLRGDIQNINENFQDMMALYEVVSNQINPFIGISKITAT
HHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SMEKVEMMENESRNLKKRVEELQNDVVILANVYLNTHQIDLDGVINEVLAEEEFSKAISG
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEECHHHHHHHHHHHHHHHHHHCC
EDSDDW
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA