Click here to switch to the map view.

The map label for this gene is flaB2 [H]

Identifier: 45359230

GI number: 45359230

Start: 1610636

End: 1611286

Strand: Direct

Name: flaB2 [H]

Synonym: MMP1667

Alternate gene names: 45359230

Gene position: 1610636-1611286 (Clockwise)

Preceding gene: 45359229

Following gene: 45359231

Centisome position: 96.96

GC content: 36.56

Gene sequence:

>651_bases
ATGAAAATAACAGAATTCATGAAAAGCAAAAAAGGTGCTTCTGGAATTGGTACCTTGATTGTTTTTATTGCAATGGTATT
AGTTGCTGCAGTTGCAGCAAGCGTTTTAATTAACACAAGCGGATTCTTACAACAAAAAGCTTCAACAACTGGTAAAGATA
GTACCGAACAGGTTGCAAGCGGTTTACAAATTATGGGTATTAGCGGATACCAAGCAGGTACTGCTAACGCAAACATTACA
AAATTAGCAATCTACATAACTCCTAACGCAGGAAGTGCTGCAATAGACATGAATCAGGTTGTTTTAACACTTTCAGACGG
AACTACAAAAACTGTTACTAAATACGATACTACCGCATACACAAACCTAACTGCAGGTGGAGACCTTTACAACACTACAA
CTGTAAACTGGTCAAAATTAGCAGATACTACAGAATTTGGAATAGTTGAAATTCAAGATGCAGATCTTTCATTTACAAGT
TCAGCACCAGTTATCAACAAAGGTGACATAGTTGCAATTATTGTAAGCGGAGTTTCATTCGATACAAGAATGGAAATTTC
AGGTACTGTTCAGCCAGAATTTGGTGCTCCAGGAGTTATTTCATTCACCACACCTTCAACATTCACTGAAAAAGTAGTTT
CATTACAATAA

Upstream 100 bases:

>100_bases
CCAGGTGTTATTTCATTTACAACCCCTGCATCATACACAACAACACTTGTAGAACTTCAATAATTAATTTAAAAAATTCA
TCCTTATTGGAGGTTCAATT

Downstream 100 bases:

>100_bases
GCCCCTTGCTTATTTTTATCCGAGGTGGTGAAATGGTAAAAAAATTCATGAAGAGTAAAAAAGGTGCCGTTGGAATCGGT
ACCTTGATAATTTTTATTGC

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKITEFMKSKKGASGIGTLIVFIAMVLVAAVAASVLINTSGFLQQKASTTGKDSTEQVASGLQIMGISGYQAGTANANIT
KLAIYITPNAGSAAIDMNQVVLTLSDGTTKTVTKYDTTAYTNLTAGGDLYNTTTVNWSKLADTTEFGIVEIQDADLSFTS
SAPVINKGDIVAIIVSGVSFDTRMEISGTVQPEFGAPGVISFTTPSTFTEKVVSLQ

Sequences:

>Translated_216_residues
MKITEFMKSKKGASGIGTLIVFIAMVLVAAVAASVLINTSGFLQQKASTTGKDSTEQVASGLQIMGISGYQAGTANANIT
KLAIYITPNAGSAAIDMNQVVLTLSDGTTKTVTKYDTTAYTNLTAGGDLYNTTTVNWSKLADTTEFGIVEIQDADLSFTS
SAPVINKGDIVAIIVSGVSFDTRMEISGTVQPEFGAPGVISFTTPSTFTEKVVSLQ
>Mature_216_residues
MKITEFMKSKKGASGIGTLIVFIAMVLVAAVAASVLINTSGFLQQKASTTGKDSTEQVASGLQIMGISGYQAGTANANIT
KLAIYITPNAGSAAIDMNQVVLTLSDGTTKTVTKYDTTAYTNLTAGGDLYNTTTVNWSKLADTTEFGIVEIQDADLSFTS
SAPVINKGDIVAIIVSGVSFDTRMEISGTVQPEFGAPGVISFTTPSTFTEKVVSLQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella [H]

COG id: COG1681

COG function: function code N; Archaeal flagellins

Gene ontology:

Cell location: Archaeal flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal flagellin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013373
- InterPro:   IPR002774 [H]

Pfam domain/function: PF01917 Arch_flagellin [H]

EC number: NA

Molecular weight: Translated: 22474; Mature: 22474

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITEFMKSKKGASGIGTLIVFIAMVLVAAVAASVLINTSGFLQQKASTTGKDSTEQVAS
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHC
GLQIMGISGYQAGTANANITKLAIYITPNAGSAAIDMNQVVLTLSDGTTKTVTKYDTTAY
CEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEECCEEE
TNLTAGGDLYNTTTVNWSKLADTTEFGIVEIQDADLSFTSSAPVINKGDIVAIIVSGVSF
EEECCCCCCCEEEECCHHHHCCCCCCCEEEEECCCCEECCCCCEECCCCEEEEEEECCCC
DTRMEISGTVQPEFGAPGVISFTTPSTFTEKVVSLQ
CEEEEEEEEECCCCCCCEEEEECCCCHHHHHHEECC
>Mature Secondary Structure
MKITEFMKSKKGASGIGTLIVFIAMVLVAAVAASVLINTSGFLQQKASTTGKDSTEQVAS
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHC
GLQIMGISGYQAGTANANITKLAIYITPNAGSAAIDMNQVVLTLSDGTTKTVTKYDTTAY
CEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEECCEEE
TNLTAGGDLYNTTTVNWSKLADTTEFGIVEIQDADLSFTSSAPVINKGDIVAIIVSGVSF
EEECCCCCCCEEEECCHHHHCCCCCCCEEEEECCCCEECCCCCEECCCCEEEEEEECCCC
DTRMEISGTVQPEFGAPGVISFTTPSTFTEKVVSLQ
CEEEEEEEEECCCCCCCEEEEECCCCHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718944; 2106880 [H]