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The map label for this gene is flaB1 [H]

Identifier: 45359229

GI number: 45359229

Start: 1609807

End: 1610598

Strand: Direct

Name: flaB1 [H]

Synonym: MMP1666

Alternate gene names: 45359229

Gene position: 1609807-1610598 (Clockwise)

Preceding gene: 45359227

Following gene: 45359230

Centisome position: 96.91

GC content: 37.63

Gene sequence:

>792_bases
ATGCCAAAACAAGTGCAAAAAAAGTATATATTAACAAAAAACGACATATTTCTTCGGGAATATCCCCGAAGAGGTAAAAA
TCTCAAGGATTCATACGAGATTCTAAAGGCTAGAAACTCTCGAAAAGAAAGTCTGGTGAACTTAGGAGGTTCAATCATGA
AAATAACAGAATTCATGAAAAGCAAAAAAGGTGCTTCTGGAATTGGTACCTTGATTGTTTTTATTGCAATGGTATTAGTT
GCTGCAGTTGCAGCAAGCGTTTTAATTAACACAAGCGGATTCTTACAACAAAAAGCTTCAACAACTGGTAAAGAAAGTAC
CGAACAAGTTGCAAGCGGTTTATTAATAAACGGAATTACTGGAAGCGTTGGAACATCAGATGTTAAATTGCTTGCAATTT
ACTTAGCCCCTAACGCAGGTAGTTCTGCAATCGATTTAGCTCAAACAAAAGTTATGCTTGACTACAATGGAAAAAGCGTA
GTTTTAGGTTACGGCGGTAACCAAGACATGAGCAGCGGAAACTCAAGTGTATTTTCAAACGATACTGGTGCGACCGCAAC
CACATTCCAAGTAAATATCTTACAAGATTACGATGATTCAGCAGTTGACAATGCAGTTATCAACAAAGGAGATGCTGTAG
CATTGATTGTTGACGTTAATGCATCATTTGCTGGAGAAATCCCTGAAAGAACTGCAATCTCAGGAAAAGTTCAGCCAGAA
TTTGGTGCTCCAGGTGTTATTTCATTTACAACCCCTGCATCATACACAACAACACTTGTAGAACTTCAATAA

Upstream 100 bases:

>100_bases
TTCGTTTTTTGCATGTGTTTGTGTAGGTTAGCACTTTTTTCGCTAAATTTACCTACATAATCATATACATAACTACATAC
CAAACCAAATACAGCACCAT

Downstream 100 bases:

>100_bases
TTAATTTAAAAAATTCATCCTTATTGGAGGTTCAATTATGAAAATAACAGAATTCATGAAAAGCAAAAAAGGTGCTTCTG
GAATTGGTACCTTGATTGTT

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MPKQVQKKYILTKNDIFLREYPRRGKNLKDSYEILKARNSRKESLVNLGGSIMKITEFMKSKKGASGIGTLIVFIAMVLV
AAVAASVLINTSGFLQQKASTTGKESTEQVASGLLINGITGSVGTSDVKLLAIYLAPNAGSSAIDLAQTKVMLDYNGKSV
VLGYGGNQDMSSGNSSVFSNDTGATATTFQVNILQDYDDSAVDNAVINKGDAVALIVDVNASFAGEIPERTAISGKVQPE
FGAPGVISFTTPASYTTTLVELQ

Sequences:

>Translated_263_residues
MPKQVQKKYILTKNDIFLREYPRRGKNLKDSYEILKARNSRKESLVNLGGSIMKITEFMKSKKGASGIGTLIVFIAMVLV
AAVAASVLINTSGFLQQKASTTGKESTEQVASGLLINGITGSVGTSDVKLLAIYLAPNAGSSAIDLAQTKVMLDYNGKSV
VLGYGGNQDMSSGNSSVFSNDTGATATTFQVNILQDYDDSAVDNAVINKGDAVALIVDVNASFAGEIPERTAISGKVQPE
FGAPGVISFTTPASYTTTLVELQ
>Mature_262_residues
PKQVQKKYILTKNDIFLREYPRRGKNLKDSYEILKARNSRKESLVNLGGSIMKITEFMKSKKGASGIGTLIVFIAMVLVA
AVAASVLINTSGFLQQKASTTGKESTEQVASGLLINGITGSVGTSDVKLLAIYLAPNAGSSAIDLAQTKVMLDYNGKSVV
LGYGGNQDMSSGNSSVFSNDTGATATTFQVNILQDYDDSAVDNAVINKGDAVALIVDVNASFAGEIPERTAISGKVQPEF
GAPGVISFTTPASYTTTLVELQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella [H]

COG id: COG1681

COG function: function code N; Archaeal flagellins

Gene ontology:

Cell location: Archaeal flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal flagellin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013373
- InterPro:   IPR002774 [H]

Pfam domain/function: PF01917 Arch_flagellin [H]

EC number: NA

Molecular weight: Translated: 27748; Mature: 27617

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKQVQKKYILTKNDIFLREYPRRGKNLKDSYEILKARNSRKESLVNLGGSIMKITEFMK
CCCHHHHHEEEECCCEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHH
SKKGASGIGTLIVFIAMVLVAAVAASVLINTSGFLQQKASTTGKESTEQVASGLLINGIT
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHCCEEEECCC
GSVGTSDVKLLAIYLAPNAGSSAIDLAQTKVMLDYNGKSVVLGYGGNQDMSSGNSSVFSN
CCCCCCCEEEEEEEEECCCCCCCEEHEEEEEEEEECCCEEEEEECCCCCCCCCCCCEECC
DTGATATTFQVNILQDYDDSAVDNAVINKGDAVALIVDVNASFAGEIPERTAISGKVQPE
CCCCEEEEEEEEEEECCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
FGAPGVISFTTPASYTTTLVELQ
CCCCEEEEECCCCCCEEEEEEEC
>Mature Secondary Structure 
PKQVQKKYILTKNDIFLREYPRRGKNLKDSYEILKARNSRKESLVNLGGSIMKITEFMK
CCHHHHHEEEECCCEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHH
SKKGASGIGTLIVFIAMVLVAAVAASVLINTSGFLQQKASTTGKESTEQVASGLLINGIT
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHCCEEEECCC
GSVGTSDVKLLAIYLAPNAGSSAIDLAQTKVMLDYNGKSVVLGYGGNQDMSSGNSSVFSN
CCCCCCCEEEEEEEEECCCCCCCEEHEEEEEEEEECCCEEEEEECCCCCCCCCCCCEECC
DTGATATTFQVNILQDYDDSAVDNAVINKGDAVALIVDVNASFAGEIPERTAISGKVQPE
CCCCEEEEEEEEEEECCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
FGAPGVISFTTPASYTTTLVELQ
CCCCEEEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9671032 [H]