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The map label for this gene is frlC [C]

Identifier: 45359112

GI number: 45359112

Start: 1502975

End: 1503781

Strand: Direct

Name: frlC [C]

Synonym: MMP1549

Alternate gene names: 45359112

Gene position: 1502975-1503781 (Clockwise)

Preceding gene: 45359110

Following gene: 45359113

Centisome position: 90.48

GC content: 31.97

Gene sequence:

>807_bases
ATGAAATATGGAATATCATCTTTAGTATTTTTACCAGAAACTCTGCAGTCCTCAATGGAAAAAGTTGCAGCAAACTCCTT
TGAATGCTGGGAAATTGTTTCTGAAGGAAGTCATCAGTTAAATCCTAAAAATATAAAATATTTAAGAAATTTAAGAGAAG
AATACGATGTTGATTTGGTAATTCACGCACCATTTTCAGATTTAAATCCTGCGTCAATGAATAGAGACGTTAGAAATCTA
ACAACAAACAGTGTCATTGAAGCAATTGAAGGTGCTTTTGAACTAGATGCAAACGTTGTTACGGTTCACCCAGGATATTT
ACCGCCACTTTGGTCTGACTATACAAAAGAAATATTGGATAACAATTTTTCTTCATTAAACGATATAGTTGAAATGGCAG
AAGACTACGAAGTAATGATTGGTTTAGAAAACATGCCAAATTACCCTGGAGTTTTGGGAGTTTCCATTGAATCATTAAAA
GACATTATAAAAGATATCAACTCAAAATACCTTGGAATTACCTTTGATATTGGTCACGCAAATACTGCAACCAAAAACCC
TGAAACTTTCGTAAAAGAGTTAAATAAAATTGGAAAAGGAATTGTTCACTGTCATATTCACGATAATCAAGGAACTGAAG
ACGAACATGCATTAATTGGTGCTGGAAACATCGACTTTTTAAAAATTTTGAGCGAATTAAAAAGTATTAATTACGATAAT
GTTTTATCTTTTGAATCTAAAAGTATACGAGATGCGGTAAACAGCAGGGAAACGATAAACAAATATCTATCAATGCTTGA
AAAATAA

Upstream 100 bases:

>100_bases
GAAATGGGTGTTTTTAATTGCACGTTATCACCAGAATAAAAACTAATTAATAGATAGAACGCTTTTATTATATTAATAGA
TAAAGCGGGGAGAGATAGTC

Downstream 100 bases:

>100_bases
AATAAATTAAAAGGTGTGATTATGAAGATTGCGATACTTGGTGGAACAGGAGATCAAGGATTTGGCCTTGCACTTAGATT
TTCAAAAAATCATGAAATAT

Product: AP endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKYGISSLVFLPETLQSSMEKVAANSFECWEIVSEGSHQLNPKNIKYLRNLREEYDVDLVIHAPFSDLNPASMNRDVRNL
TTNSVIEAIEGAFELDANVVTVHPGYLPPLWSDYTKEILDNNFSSLNDIVEMAEDYEVMIGLENMPNYPGVLGVSIESLK
DIIKDINSKYLGITFDIGHANTATKNPETFVKELNKIGKGIVHCHIHDNQGTEDEHALIGAGNIDFLKILSELKSINYDN
VLSFESKSIRDAVNSRETINKYLSMLEK

Sequences:

>Translated_268_residues
MKYGISSLVFLPETLQSSMEKVAANSFECWEIVSEGSHQLNPKNIKYLRNLREEYDVDLVIHAPFSDLNPASMNRDVRNL
TTNSVIEAIEGAFELDANVVTVHPGYLPPLWSDYTKEILDNNFSSLNDIVEMAEDYEVMIGLENMPNYPGVLGVSIESLK
DIIKDINSKYLGITFDIGHANTATKNPETFVKELNKIGKGIVHCHIHDNQGTEDEHALIGAGNIDFLKILSELKSINYDN
VLSFESKSIRDAVNSRETINKYLSMLEK
>Mature_268_residues
MKYGISSLVFLPETLQSSMEKVAANSFECWEIVSEGSHQLNPKNIKYLRNLREEYDVDLVIHAPFSDLNPASMNRDVRNL
TTNSVIEAIEGAFELDANVVTVHPGYLPPLWSDYTKEILDNNFSSLNDIVEMAEDYEVMIGLENMPNYPGVLGVSIESLK
DIIKDINSKYLGITFDIGHANTATKNPETFVKELNKIGKGIVHCHIHDNQGTEDEHALIGAGNIDFLKILSELKSINYDN
VLSFESKSIRDAVNSRETINKYLSMLEK

Specific function: Not Clear, May Be Involved In An Isomerization Step. [C]

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1614 and MJ0008 [H]

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 30114; Mature: 30114

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYGISSLVFLPETLQSSMEKVAANSFECWEIVSEGSHQLNPKNIKYLRNLREEYDVDLV
CCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEE
IHAPFSDLNPASMNRDVRNLTTNSVIEAIEGAFELDANVVTVHPGYLPPLWSDYTKEILD
EECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHC
NNFSSLNDIVEMAEDYEVMIGLENMPNYPGVLGVSIESLKDIIKDINSKYLGITFDIGHA
CCHHHHHHHHHHHHCCEEEEECCCCCCCCCEECCCHHHHHHHHHHHCCCEEEEEEECCCC
NTATKNPETFVKELNKIGKGIVHCHIHDNQGTEDEHALIGAGNIDFLKILSELKSINYDN
CCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCC
VLSFESKSIRDAVNSRETINKYLSMLEK
EECCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYGISSLVFLPETLQSSMEKVAANSFECWEIVSEGSHQLNPKNIKYLRNLREEYDVDLV
CCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEE
IHAPFSDLNPASMNRDVRNLTTNSVIEAIEGAFELDANVVTVHPGYLPPLWSDYTKEILD
EECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHC
NNFSSLNDIVEMAEDYEVMIGLENMPNYPGVLGVSIESLKDIIKDINSKYLGITFDIGHA
CCHHHHHHHHHHHHCCEEEEECCCCCCCCCEECCCHHHHHHHHHHHCCCEEEEEEECCCC
NTATKNPETFVKELNKIGKGIVHCHIHDNQGTEDEHALIGAGNIDFLKILSELKSINYDN
CCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCC
VLSFESKSIRDAVNSRETINKYLSMLEK
EECCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]