Click here to switch to the map view.

The map label for this gene is 45358791

Identifier: 45358791

GI number: 45358791

Start: 1217256

End: 1217903

Strand: Direct

Name: 45358791

Synonym: MMP1228

Alternate gene names: NA

Gene position: 1217256-1217903 (Clockwise)

Preceding gene: 45358790

Following gene: 45358792

Centisome position: 73.28

GC content: 27.93

Gene sequence:

>648_bases
TTGAAAAAAGTGGCCGGTTTACTTTCAGTCTTTGGATTATTACTATTAACCCTATTTTCAGGATGTATTGGAAACGACTA
CAGCTCTGTTGAAATTGTTGAAAATAGCCCTTATCCAGAATTTATCTACTTAAATAAAGATATGTTAAAAGTGATTACAA
ATAAAACTTCAGAGCACCAAACTCCCGACTATTTCTTCGTAATATTTGATGGAGCATACATTGATAAAAATAACTACTCA
AAAATAGCTGTAAAAACTCCTTTATGGAGATTTGGAAGCCTTTTTGCAGATGAAAATATAAAAACGAAAAATGGAATGAT
ATTTTTAAATTCAGATTACGTTCAAAAACCAGATCTTAAATACAATAAACCCCTTAATTATAACGACGTTATTGTCTATA
ACAAAAATTATGGGATATTCATAGAAATTGGCGAAGAATATAATTATGCTGAACTAATTACAGAAAATTTAAACGAAAAT
AGATATTTCATGGAAAATATTGATGATATTGTAGGTAAAAATATTATAAATCGAACAATTATTGAAAATGAAGACTTGTT
GCTTGGAACTTACGTGTTAGAAAATGGAATTCCTGTTGGTGACATTAATAACAGCTTATTTAAAATGAATATTACTTCAA
CGTCTTAA

Upstream 100 bases:

>100_bases
TATTCAAACGAAAGAATAATTACAAATAAAATATCAAATTTAGTGAAAAATGATTATTCGTACCTTTTAGTCTGCATTAT
AAACTAAAGAGGAGATACTT

Downstream 100 bases:

>100_bases
AAAACATTTAATTTTTAAGACCCAAATAAAAAGATATAAAAAATGATTTAACGAATAAATAATATCAATATAAAAGCGTA
AAAAGGTATAAATCATGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKKVAGLLSVFGLLLLTLFSGCIGNDYSSVEIVENSPYPEFIYLNKDMLKVITNKTSEHQTPDYFFVIFDGAYIDKNNYS
KIAVKTPLWRFGSLFADENIKTKNGMIFLNSDYVQKPDLKYNKPLNYNDVIVYNKNYGIFIEIGEEYNYAELITENLNEN
RYFMENIDDIVGKNIINRTIIENEDLLLGTYVLENGIPVGDINNSLFKMNITSTS

Sequences:

>Translated_215_residues
MKKVAGLLSVFGLLLLTLFSGCIGNDYSSVEIVENSPYPEFIYLNKDMLKVITNKTSEHQTPDYFFVIFDGAYIDKNNYS
KIAVKTPLWRFGSLFADENIKTKNGMIFLNSDYVQKPDLKYNKPLNYNDVIVYNKNYGIFIEIGEEYNYAELITENLNEN
RYFMENIDDIVGKNIINRTIIENEDLLLGTYVLENGIPVGDINNSLFKMNITSTS
>Mature_215_residues
MKKVAGLLSVFGLLLLTLFSGCIGNDYSSVEIVENSPYPEFIYLNKDMLKVITNKTSEHQTPDYFFVIFDGAYIDKNNYS
KIAVKTPLWRFGSLFADENIKTKNGMIFLNSDYVQKPDLKYNKPLNYNDVIVYNKNYGIFIEIGEEYNYAELITENLNEN
RYFMENIDDIVGKNIINRTIIENEDLLLGTYVLENGIPVGDINNSLFKMNITSTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24691; Mature: 24691

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVAGLLSVFGLLLLTLFSGCIGNDYSSVEIVENSPYPEFIYLNKDMLKVITNKTSEHQ
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECHHHHHHHHCCCCCCC
TPDYFFVIFDGAYIDKNNYSKIAVKTPLWRFGSLFADENIKTKNGMIFLNSDYVQKPDLK
CCCEEEEEEECEEECCCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCC
YNKPLNYNDVIVYNKNYGIFIEIGEEYNYAELITENLNENRYFMENIDDIVGKNIINRTI
CCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHE
IENEDLLLGTYVLENGIPVGDINNSLFKMNITSTS
ECCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MKKVAGLLSVFGLLLLTLFSGCIGNDYSSVEIVENSPYPEFIYLNKDMLKVITNKTSEHQ
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECHHHHHHHHCCCCCCC
TPDYFFVIFDGAYIDKNNYSKIAVKTPLWRFGSLFADENIKTKNGMIFLNSDYVQKPDLK
CCCEEEEEEECEEECCCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCC
YNKPLNYNDVIVYNKNYGIFIEIGEEYNYAELITENLNENRYFMENIDDIVGKNIINRTI
CCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHE
IENEDLLLGTYVLENGIPVGDINNSLFKMNITSTS
ECCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA