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The map label for this gene is rps6e [H]

Identifier: 45358770

GI number: 45358770

Start: 1194298

End: 1194672

Strand: Direct

Name: rps6e [H]

Synonym: MMP1207

Alternate gene names: 45358770

Gene position: 1194298-1194672 (Clockwise)

Preceding gene: 45358769

Following gene: 45358771

Centisome position: 71.9

GC content: 36.53

Gene sequence:

>375_bases
ATGGCTTTTAAAGTTGTTGTATCAGATTCTAAAACAGGAAAATCATACCAATTCGAAACAGAATCCAATGCACTTATCGG
TAAAAAAATCGGTGATGAAATCAGCGGTTCAATTGTTGAATTAGAAGGTTACAAATTAAAAATCACTGGCGGATCCGACA
GATGTGGATTTGCAATGAGACACGACATTCACGGCGCTATGAAAATGAGAGTACTCTTAAAAGAAGGACCTGGATACAAC
GTTAAAGAAAAAGGTCTTAGAAGAAGAAAAAGCTTAAGAGGAAACACAATCTCAAAAGATATTACATTAATCAACACAAA
AGTTGTGGAATACGGTTCAGCACCTCTCGGTGGAGAACCTGAAAGTACCGAATAA

Upstream 100 bases:

>100_bases
AAAGACGGGAATTTAGGAAAATTTTTGGAAAAATAAATTTTTAGAGCTTTTTCGCGAACGATTTGAAACAAGGTATATTG
AAAAAAAACGAGGTAATATC

Downstream 100 bases:

>100_bases
ATTAACTCTTTTTTTCTCTTTTAATTGGTCAGGCTTTTTTAAAGATTATATATCTATATAAAGTATTAGCCATAAAGTGA
TTATAGTTTTAACGTCATTT

Product: 30S ribosomal protein S6e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MAFKVVVSDSKTGKSYQFETESNALIGKKIGDEISGSIVELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPGYN
VKEKGLRRRKSLRGNTISKDITLINTKVVEYGSAPLGGEPESTE

Sequences:

>Translated_124_residues
MAFKVVVSDSKTGKSYQFETESNALIGKKIGDEISGSIVELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPGYN
VKEKGLRRRKSLRGNTISKDITLINTKVVEYGSAPLGGEPESTE
>Mature_123_residues
AFKVVVSDSKTGKSYQFETESNALIGKKIGDEISGSIVELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPGYNV
KEKGLRRRKSLRGNTISKDITLINTKVVEYGSAPLGGEPESTE

Specific function: Unknown

COG id: COG2125

COG function: function code J; Ribosomal protein S6E (S10)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S6e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001377
- InterPro:   IPR020924 [H]

Pfam domain/function: PF01092 Ribosomal_S6e [H]

EC number: NA

Molecular weight: Translated: 13538; Mature: 13407

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFKVVVSDSKTGKSYQFETESNALIGKKIGDEISGSIVELEGYKLKITGGSDRCGFAMR
CEEEEEEECCCCCCEEEEECCCCEEECCCCCCCCCCCEEEECCEEEEEECCCCCCCEEEH
HDIHGAMKMRVLLKEGPGYNVKEKGLRRRKSLRGNTISKDITLINTKVVEYGSAPLGGEP
HHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCC
ESTE
CCCC
>Mature Secondary Structure 
AFKVVVSDSKTGKSYQFETESNALIGKKIGDEISGSIVELEGYKLKITGGSDRCGFAMR
EEEEEEECCCCCCEEEEECCCCEEECCCCCCCCCCCEEEECCEEEEEECCCCCCCEEEH
HDIHGAMKMRVLLKEGPGYNVKEKGLRRRKSLRGNTISKDITLINTKVVEYGSAPLGGEP
HHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCC
ESTE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA