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The map label for this gene is 45358741

Identifier: 45358741

GI number: 45358741

Start: 1160235

End: 1161356

Strand: Direct

Name: 45358741

Synonym: MMP1178

Alternate gene names: NA

Gene position: 1160235-1161356 (Clockwise)

Preceding gene: 45358740

Following gene: 45358742

Centisome position: 69.85

GC content: 34.14

Gene sequence:

>1122_bases
TTGAATAAAAAAATAATATCCATTATTGTAGCACTTATGATGTCGCTTGTCGTTGCACTTTCAGGCTGTGTTGAAAGTAG
TGATTCTGGTACATCTGAGGATATTAAAACTGTTGAAATTGTAGATATGGTTGGAAGAACTGTTGAAATTCCTGCAGACG
TTCAAAAAATTGTATGCTCAGGACCTGGCTGTTTGAGATTAATTTCTTACTTAAATGCAACTGACAAACTAGTTGGAATT
GAGGATTTTGAAAATACAAATCTTATAGGAAGACCTTACAGACTTGCACATCCTGAATTCTCAGAACTTTCTGTAATTGG
AAATGGCGGACCGCAAGATATTAATGTCGGACCAGACCCTGAAAAGGTATTAAACGTAATGCCTGAGGTAATATTCATAA
CGTACATAGACTCGGATAACGCAGACGAACTTCAGAAAAAAACCGGAATCCCCGTTGTGGTTTTAAGTTACGGTGCACTT
GGAAACTTCAAAAATGATGCAATATTTAATTCACTAACACTTTGCGGAGAAATTCTTGGAAAAGAAGAAAGAGCAGAAGA
AGTAATTTCGTTTATATCAAATATTCAGGACGATTTAGATAAAAGAACTTCTGAAATTCCCGATGAAGAAAAACCAAGTA
TTTACGTTGGAGCAATTGGTAACAAAGGTATTCACGGAATCGACAGTACTGAAGGTTCATACCCGCCATTTGAATCATTA
AATACTGAAAATATTGCAAAAACTGCATCTAATGAACATATTTTCATAAGTAAAGAGCAGTTAATCGAATGGAATCCAGA
ATTCATCTTTATTGATGAAGGAGGAATCTCAATTGTGTATGAGGACTACGAAAAAAATCCCGATTATTACAATTCGCTCG
ATGCATTTAAAAATGGAAATGTTTACGGCATTTTACCATTTAACTACTATACAACAAACATTGACACTGCAATGGCAGAT
TCATACTACATTGGAACGATTCTTTACCCTGAAGCATTTTCAGATATTGATCCAAAAGCTAAAGCTGATGAAATATATGA
ATTTTTAGTTGGAAAAGGAGTATATTCCAAAATGAATGAAATGTTTGAGGGATTTGAAAATTTAGACTTTTCAAACCAGT
AA

Upstream 100 bases:

>100_bases
TTCATTAATTAAATTTTATTATTTTTTAGTAATACTATATCGAAAAATATATGTAATAATAATACTACATTTTTTAAAAG
ATATTAATTCAGGTGGTATT

Downstream 100 bases:

>100_bases
TTTCTTTTTTTTCTTTTTTAAAATTTTTTTAAAGAGTATTTAAATTCAACATATTTAGCCCAATTCTTCGTAAAACTATT
TTTAAATTTTAACCTGTGAT

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MNKKIISIIVALMMSLVVALSGCVESSDSGTSEDIKTVEIVDMVGRTVEIPADVQKIVCSGPGCLRLISYLNATDKLVGI
EDFENTNLIGRPYRLAHPEFSELSVIGNGGPQDINVGPDPEKVLNVMPEVIFITYIDSDNADELQKKTGIPVVVLSYGAL
GNFKNDAIFNSLTLCGEILGKEERAEEVISFISNIQDDLDKRTSEIPDEEKPSIYVGAIGNKGIHGIDSTEGSYPPFESL
NTENIAKTASNEHIFISKEQLIEWNPEFIFIDEGGISIVYEDYEKNPDYYNSLDAFKNGNVYGILPFNYYTTNIDTAMAD
SYYIGTILYPEAFSDIDPKAKADEIYEFLVGKGVYSKMNEMFEGFENLDFSNQ

Sequences:

>Translated_373_residues
MNKKIISIIVALMMSLVVALSGCVESSDSGTSEDIKTVEIVDMVGRTVEIPADVQKIVCSGPGCLRLISYLNATDKLVGI
EDFENTNLIGRPYRLAHPEFSELSVIGNGGPQDINVGPDPEKVLNVMPEVIFITYIDSDNADELQKKTGIPVVVLSYGAL
GNFKNDAIFNSLTLCGEILGKEERAEEVISFISNIQDDLDKRTSEIPDEEKPSIYVGAIGNKGIHGIDSTEGSYPPFESL
NTENIAKTASNEHIFISKEQLIEWNPEFIFIDEGGISIVYEDYEKNPDYYNSLDAFKNGNVYGILPFNYYTTNIDTAMAD
SYYIGTILYPEAFSDIDPKAKADEIYEFLVGKGVYSKMNEMFEGFENLDFSNQ
>Mature_373_residues
MNKKIISIIVALMMSLVVALSGCVESSDSGTSEDIKTVEIVDMVGRTVEIPADVQKIVCSGPGCLRLISYLNATDKLVGI
EDFENTNLIGRPYRLAHPEFSELSVIGNGGPQDINVGPDPEKVLNVMPEVIFITYIDSDNADELQKKTGIPVVVLSYGAL
GNFKNDAIFNSLTLCGEILGKEERAEEVISFISNIQDDLDKRTSEIPDEEKPSIYVGAIGNKGIHGIDSTEGSYPPFESL
NTENIAKTASNEHIFISKEQLIEWNPEFIFIDEGGISIVYEDYEKNPDYYNSLDAFKNGNVYGILPFNYYTTNIDTAMAD
SYYIGTILYPEAFSDIDPKAKADEIYEFLVGKGVYSKMNEMFEGFENLDFSNQ

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 41280; Mature: 41280

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKIISIIVALMMSLVVALSGCVESSDSGTSEDIKTVEIVDMVGRTVEIPADVQKIVCS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEECCHHHHHHHHC
GPGCLRLISYLNATDKLVGIEDFENTNLIGRPYRLAHPEFSELSVIGNGGPQDINVGPDP
CCHHHHHHHHHCCHHCEECCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCCH
EKVLNVMPEVIFITYIDSDNADELQKKTGIPVVVLSYGALGNFKNDAIFNSLTLCGEILG
HHHHHHCCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHC
KEERAEEVISFISNIQDDLDKRTSEIPDEEKPSIYVGAIGNKGIHGIDSTEGSYPPFESL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHCC
NTENIAKTASNEHIFISKEQLIEWNPEFIFIDEGGISIVYEDYEKNPDYYNSLDAFKNGN
CHHHHHHHCCCCEEEEEHHHHHCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHCCCC
VYGILPFNYYTTNIDTAMADSYYIGTILYPEAFSDIDPKAKADEIYEFLVGKGVYSKMNE
EEEEEECCEEECCCCHHHCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH
MFEGFENLDFSNQ
HHHHHHCCCCCCC
>Mature Secondary Structure
MNKKIISIIVALMMSLVVALSGCVESSDSGTSEDIKTVEIVDMVGRTVEIPADVQKIVCS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEECCHHHHHHHHC
GPGCLRLISYLNATDKLVGIEDFENTNLIGRPYRLAHPEFSELSVIGNGGPQDINVGPDP
CCHHHHHHHHHCCHHCEECCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCCH
EKVLNVMPEVIFITYIDSDNADELQKKTGIPVVVLSYGALGNFKNDAIFNSLTLCGEILG
HHHHHHCCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHC
KEERAEEVISFISNIQDDLDKRTSEIPDEEKPSIYVGAIGNKGIHGIDSTEGSYPPFESL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHCC
NTENIAKTASNEHIFISKEQLIEWNPEFIFIDEGGISIVYEDYEKNPDYYNSLDAFKNGN
CHHHHHHHCCCCEEEEEHHHHHCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHCCCC
VYGILPFNYYTTNIDTAMADSYYIGTILYPEAFSDIDPKAKADEIYEFLVGKGVYSKMNE
EEEEEECCEEECCCCHHHCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH
MFEGFENLDFSNQ
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]