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The map label for this gene is sufB [C]

Identifier: 45358732

GI number: 45358732

Start: 1152534

End: 1153790

Strand: Direct

Name: sufB [C]

Synonym: MMP1169

Alternate gene names: 45358732

Gene position: 1152534-1153790 (Clockwise)

Preceding gene: 45358731

Following gene: 45358733

Centisome position: 69.38

GC content: 36.67

Gene sequence:

>1257_bases
ATGCTGTCAGAAAAAAAGTTGCAACAAGTAAGGGAAATGGCTGAAAAATATAAGGACGTTCCTGCAAAATTTGGAGAAGA
TATTGACTTAAGCATGTATCCTACACCAAAAGAAAACCTTTTGAAAGTGGAATCATTAAAAGACTTAAACGAAGATCATA
AACAAGCTCTTGCAAATGTTGGAGTGGACATTGAAGAAAAAAGCACGGTTGGATCTTACGTTCAGGTAAACAGTGATGCA
ATATACTCGAAAATGTATTCGGATATTATACTTATGCCAATTACTGAAGCTCTTGAAAAATTCGAACTTGACGACTACTA
CTGGAACGCAGTTCAGATGAGCGACAAATACGGCGCAAGAGTTGCAAAAGAACTTACCGAAGGATATTTTATTCGAGCTC
CAAAAGGCGTTAAAAAAACAATTCCTCTTCAGACATGCCTTTTAATAGGTAGTGAGGAAGTGTCTCAAAACGTTCACAAC
ATTATTATCGTGGAAGAAGGAGCAGAATTAAACGTAATTACTGGATGTACTACATCCCCACACGTTAAATCAGGGCTTCA
CCTTGGAGTTTCTGAGATATACCTTGAAAAAAATGCAAAACTTACCTTTACGATGATTCACAATTGGGGAGAAAATGTAC
ACGTAAGGCCAAGAACTGCAATAAAAATGGACGACGATTCCATATTTATAAACAATTACGTTACAATGATGCCCGTAAAA
TCAATCCAAAGCTACCCTACCGCATACTGTGAAGGAAAAAATGCTAAAGCAACTTTCCAGACAATAGTATACGGAAAAGG
AAGTTCAAACTTAGATATGGGTTCAAGAGTAATTCTTTCAGGAGAAAATTCAGCTGCCGACATGATTTCAAGAGTTATCG
TAGTAGATGATGCAAAAGTTATCTCAAGAGGTCACCTTATAGGTGCAGAGTCAAACGTTAAAGGCCACCTCGAATGTAGG
GGTTTAATTTTATCAAATGACGGACATATTTTAGCAGTTCCTGAACTTGAAGCTGAAAAAACAGACCTTGAATTGTCACA
CGAAGCTGCAGTTGGAAAAATCGCAGAAGATCAGATCCAATACTTAATGTCAAGAGGATTAAGCGAAGACGAAGCATCTT
CTTTAATTATCAAAGGATTTTTAAGTGTCGACATATCAGGCCTTCCGCCAGAACTTGCAAAATCCGTTAAAGAAATGATG
GATGACACTCGAAAATGCAATGTAAAATCCATGTTTTTTACTTTTTTAAATATTTAA

Upstream 100 bases:

>100_bases
ATAAAGCCCATGTGCTATTAGACGGAGTAATTGCCTGTTCGGGAACCCCTGACGAAATTTTAAATGAAATTATTAAAAAT
GGATACCAGAGGTGTGTTTC

Downstream 100 bases:

>100_bases
AGAATTAATAAAAAAATTTACAAACAAGTGTTTTTTATACAATAACTTTTTTTATATATGACGAGCTTAAATATAGATAA
TATTTAAAATTTAAATATTC

Product: SufBD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MLSEKKLQQVREMAEKYKDVPAKFGEDIDLSMYPTPKENLLKVESLKDLNEDHKQALANVGVDIEEKSTVGSYVQVNSDA
IYSKMYSDIILMPITEALEKFELDDYYWNAVQMSDKYGARVAKELTEGYFIRAPKGVKKTIPLQTCLLIGSEEVSQNVHN
IIIVEEGAELNVITGCTTSPHVKSGLHLGVSEIYLEKNAKLTFTMIHNWGENVHVRPRTAIKMDDDSIFINNYVTMMPVK
SIQSYPTAYCEGKNAKATFQTIVYGKGSSNLDMGSRVILSGENSAADMISRVIVVDDAKVISRGHLIGAESNVKGHLECR
GLILSNDGHILAVPELEAEKTDLELSHEAAVGKIAEDQIQYLMSRGLSEDEASSLIIKGFLSVDISGLPPELAKSVKEMM
DDTRKCNVKSMFFTFLNI

Sequences:

>Translated_418_residues
MLSEKKLQQVREMAEKYKDVPAKFGEDIDLSMYPTPKENLLKVESLKDLNEDHKQALANVGVDIEEKSTVGSYVQVNSDA
IYSKMYSDIILMPITEALEKFELDDYYWNAVQMSDKYGARVAKELTEGYFIRAPKGVKKTIPLQTCLLIGSEEVSQNVHN
IIIVEEGAELNVITGCTTSPHVKSGLHLGVSEIYLEKNAKLTFTMIHNWGENVHVRPRTAIKMDDDSIFINNYVTMMPVK
SIQSYPTAYCEGKNAKATFQTIVYGKGSSNLDMGSRVILSGENSAADMISRVIVVDDAKVISRGHLIGAESNVKGHLECR
GLILSNDGHILAVPELEAEKTDLELSHEAAVGKIAEDQIQYLMSRGLSEDEASSLIIKGFLSVDISGLPPELAKSVKEMM
DDTRKCNVKSMFFTFLNI
>Mature_418_residues
MLSEKKLQQVREMAEKYKDVPAKFGEDIDLSMYPTPKENLLKVESLKDLNEDHKQALANVGVDIEEKSTVGSYVQVNSDA
IYSKMYSDIILMPITEALEKFELDDYYWNAVQMSDKYGARVAKELTEGYFIRAPKGVKKTIPLQTCLLIGSEEVSQNVHN
IIIVEEGAELNVITGCTTSPHVKSGLHLGVSEIYLEKNAKLTFTMIHNWGENVHVRPRTAIKMDDDSIFINNYVTMMPVK
SIQSYPTAYCEGKNAKATFQTIVYGKGSSNLDMGSRVILSGENSAADMISRVIVVDDAKVISRGHLIGAESNVKGHLECR
GLILSNDGHILAVPELEAEKTDLELSHEAAVGKIAEDQIQYLMSRGLSEDEASSLIIKGFLSVDISGLPPELAKSVKEMM
DDTRKCNVKSMFFTFLNI

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=294, Percent_Identity=25.8503401360544, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 46416; Mature: 46416

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSEKKLQQVREMAEKYKDVPAKFGEDIDLSMYPTPKENLLKVESLKDLNEDHKQALANV
CCCHHHHHHHHHHHHHHHCCHHHCCCCCCEEECCCCHHHHEEHHHHHHCCHHHHHHHHHC
GVDIEEKSTVGSYVQVNSDAIYSKMYSDIILMPITEALEKFELDDYYWNAVQMSDKYGAR
CCCCCCCCCCCCEEEECCHHHHHHHHHCEEEEEHHHHHHHCCCCCCEECEEEECHHHHHH
VAKELTEGYFIRAPKGVKKTIPLQTCLLIGSEEVSQNVHNIIIVEEGAELNVITGCTTSP
HHHHHHCCEEEECCCCCCCCCCHHHHEEECCHHHHCCCCEEEEEECCCEEEEEECCCCCC
HVKSGLHLGVSEIYLEKNAKLTFTMIHNWGENVHVRPRTAIKMDDDSIFINNYVTMMPVK
CCCCCCCCCHHHEEEECCCCEEEEEEECCCCCEEECCCEEEEECCCCEEECCEEEEEEHH
SIQSYPTAYCEGKNAKATFQTIVYGKGSSNLDMGSRVILSGENSAADMISRVIVVDDAKV
HHHHCCCCEECCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHEEEEEECHHH
ISRGHLIGAESNVKGHLECRGLILSNDGHILAVPELEAEKTDLELSHEAAVGKIAEDQIQ
HHCCEEECCCCCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCEECHHHHHHHHHHHHHH
YLMSRGLSEDEASSLIIKGFLSVDISGLPPELAKSVKEMMDDTRKCNVKSMFFTFLNI
HHHHCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MLSEKKLQQVREMAEKYKDVPAKFGEDIDLSMYPTPKENLLKVESLKDLNEDHKQALANV
CCCHHHHHHHHHHHHHHHCCHHHCCCCCCEEECCCCHHHHEEHHHHHHCCHHHHHHHHHC
GVDIEEKSTVGSYVQVNSDAIYSKMYSDIILMPITEALEKFELDDYYWNAVQMSDKYGAR
CCCCCCCCCCCCEEEECCHHHHHHHHHCEEEEEHHHHHHHCCCCCCEECEEEECHHHHHH
VAKELTEGYFIRAPKGVKKTIPLQTCLLIGSEEVSQNVHNIIIVEEGAELNVITGCTTSP
HHHHHHCCEEEECCCCCCCCCCHHHHEEECCHHHHCCCCEEEEEECCCEEEEEECCCCCC
HVKSGLHLGVSEIYLEKNAKLTFTMIHNWGENVHVRPRTAIKMDDDSIFINNYVTMMPVK
CCCCCCCCCHHHEEEECCCCEEEEEEECCCCCEEECCCEEEEECCCCEEECCEEEEEEHH
SIQSYPTAYCEGKNAKATFQTIVYGKGSSNLDMGSRVILSGENSAADMISRVIVVDDAKV
HHHHCCCCEECCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHEEEEEECHHH
ISRGHLIGAESNVKGHLECRGLILSNDGHILAVPELEAEKTDLELSHEAAVGKIAEDQIQ
HHCCEEECCCCCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCEECHHHHHHHHHHHHHH
YLMSRGLSEDEASSLIIKGFLSVDISGLPPELAKSVKEMMDDTRKCNVKSMFFTFLNI
HHHHCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]