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The map label for this gene is yurY [H]

Identifier: 45358731

GI number: 45358731

Start: 1151818

End: 1152564

Strand: Direct

Name: yurY [H]

Synonym: MMP1168

Alternate gene names: 45358731

Gene position: 1151818-1152564 (Clockwise)

Preceding gene: 45358730

Following gene: 45358732

Centisome position: 69.34

GC content: 36.95

Gene sequence:

>747_bases
ATGCTACAGATCGAAGACTTATCGGTTAAGGTGGGTGACAAAGAAATTTTAAAAGATATCCACCTTTATATCGAAAAAGG
AGAAAGTCATGTATTATTTGGGCCTAATGGGGCAGGGAAATCCACATTACTCAATACAATTCTCGGAAACCCTAAATACG
AAGTTGTAAGGGGAAATATTTACTTTAAAGGAAAAGATATAACTGACATGCCAATGCATGAAAGAGCACAGCTTGGAATT
GGTATTTCTTACCAGTCACCACCTGCAATTTCTGGCGTAAGGCTTGAAACGATGATAAACGCCATTTCAAAAAGAAGTGA
CGAAGAAATGGAAGAAATGGCTAAAAGATTAAACATCAGACATTTCTACCAAAGAGACTTAAACGTTGGTTTTTCAGGTG
GGGAAGTTAAAAGGTCTGAATTATTACAGATTTTTGCACAAAACCCTGATCTTGTGATGTTTGATGAACCCGATAGCGGT
GTTGACGTTGAAAACGTAGAACTCCTCGGTGGAATCATTAACCACTTACTTGATAAAGACAGAAAACCAAGTGAACGAAA
TAAATCCGGACTTATCATAACTCACCTTGGATATATCTTAAATTTCATGGAAGTTGATAAAGCCCATGTGCTATTAGACG
GAGTAATTGCCTGTTCGGGAACCCCTGACGAAATTTTAAATGAAATTATTAAAAATGGATACCAGAGGTGTGTTTCATGC
TGTCAGAAAAAAAGTTGCAACAAGTAA

Upstream 100 bases:

>100_bases
AGAAAATGTTAATATTCTTAAGAAAATGCAGAGCATTACGATATTAGAAAATGTGGATGACATTAGAGACGTACTTTTGA
AACATATTAAAGGTGATTAA

Downstream 100 bases:

>100_bases
GGGAAATGGCTGAAAAATATAAGGACGTTCCTGCAAAATTTGGAGAAGATATTGACTTAAGCATGTATCCTACACCAAAA
GAAAACCTTTTGAAAGTGGA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNIYFKGKDITDMPMHERAQLGI
GISYQSPPAISGVRLETMINAISKRSDEEMEEMAKRLNIRHFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSG
VDVENVELLGGIINHLLDKDRKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTPDEILNEIIKNGYQRCVSC
CQKKSCNK

Sequences:

>Translated_248_residues
MLQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNIYFKGKDITDMPMHERAQLGI
GISYQSPPAISGVRLETMINAISKRSDEEMEEMAKRLNIRHFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSG
VDVENVELLGGIINHLLDKDRKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTPDEILNEIIKNGYQRCVSC
CQKKSCNK
>Mature_248_residues
MLQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNIYFKGKDITDMPMHERAQLGI
GISYQSPPAISGVRLETMINAISKRSDEEMEEMAKRLNIRHFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSG
VDVENVELLGGIINHLLDKDRKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTPDEILNEIIKNGYQRCVSC
CQKKSCNK

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI11967969, Length=238, Percent_Identity=26.890756302521, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI171184400, Length=236, Percent_Identity=29.6610169491525, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1787972, Length=235, Percent_Identity=39.1489361702128, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1789593, Length=247, Percent_Identity=30.3643724696356, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786563, Length=259, Percent_Identity=27.7992277992278, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790739, Length=245, Percent_Identity=26.9387755102041, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI87082268, Length=241, Percent_Identity=28.2157676348548, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788165, Length=235, Percent_Identity=27.6595744680851, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787029, Length=252, Percent_Identity=26.1904761904762, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790525, Length=234, Percent_Identity=27.3504273504274, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1790467, Length=234, Percent_Identity=26.4957264957265, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI48995001, Length=243, Percent_Identity=27.9835390946502, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI87081791, Length=169, Percent_Identity=28.9940828402367, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789672, Length=236, Percent_Identity=25.8474576271186, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=235, Percent_Identity=27.2340425531915, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193202349, Length=228, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=226, Percent_Identity=24.7787610619469, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17543740, Length=221, Percent_Identity=25.7918552036199, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71984940, Length=225, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=238, Percent_Identity=25.6302521008403, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=193, Percent_Identity=25.3886010362694, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI281363262, Length=234, Percent_Identity=29.0598290598291, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24653245, Length=234, Percent_Identity=29.0598290598291, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27745; Mature: 27745

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNI
CCEEECCEEEECCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEEE
YFKGKDITDMPMHERAQLGIGISYQSPPAISGVRLETMINAISKRSDEEMEEMAKRLNIR
EECCCCCCCCCCCHHHHHCEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCHH
HFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSGVDVENVELLGGIINHLLDKD
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
RKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTPDEILNEIIKNGYQRCVSC
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHH
CQKKSCNK
HHHHCCCC
>Mature Secondary Structure
MLQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNI
CCEEECCEEEECCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEEE
YFKGKDITDMPMHERAQLGIGISYQSPPAISGVRLETMINAISKRSDEEMEEMAKRLNIR
EECCCCCCCCCCCHHHHHCEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCHH
HFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSGVDVENVELLGGIINHLLDKD
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
RKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTPDEILNEIIKNGYQRCVSC
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHH
CQKKSCNK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]