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The map label for this gene is hdrC1 [H]

Identifier: 45358717

GI number: 45358717

Start: 1142799

End: 1143377

Strand: Direct

Name: hdrC1 [H]

Synonym: MMP1154

Alternate gene names: 45358717

Gene position: 1142799-1143377 (Clockwise)

Preceding gene: 45358712

Following gene: 45358718

Centisome position: 68.8

GC content: 36.96

Gene sequence:

>579_bases
ATGGTTTTAAAATCTAGTGAATTTAATCCTGATTTTCCAAAACAGATTATTGAATCTGGAGAATGGATATTCGGAGATCA
TGCGTCTTCTTTTCAAAAATGTTACCAGTGCGGAACGTGTACTGGGGCATGTCCTAGCGGCAGAATAACGGCACTCAGGA
CGAGAAAATTAATAAGAAGTGCACTTGCAGGAATTGACAGTATTTTATCAGGTGATGACCTGTGGATGTGTACTACATGC
TATGAATGCTACGAAAAATGCCCAAGGGAAGTAAAAATAACTGATATTATTAAAATTATAAGAAATATCGCTGCTGAAAA
AGGATACATTGCAGAACCGCACAGGAAAACCAGCCTGCTTGTATTTAAAACTGGGCATGCTGTTCCCGTTAATGATGAAA
TTAAAAAAGCAAGGCTTGCGATTGGATTAACAGAAATACCTCCAACAACCCACAAATACCCCGAAGCTTTAGAAATCGTA
AGGGATATTATGGAAGACCTTAATTTCTGTAAAAAAGTTGGAATTTGTAGAGAAACTATGGACTTAGAACCGTTAAATGT
TCAAAAATCTGAGGAATAG

Upstream 100 bases:

>100_bases
GTTTTCTCTATTTTACTGCTGTATAATATATACGTCAAACGTGCAAATATATATCAAGTTTTAAAACAAAGATTAAATTA
TACCGGGGAGGTGAAATCGA

Downstream 100 bases:

>100_bases
GGGTGAAATAGGATGAGTGAAACTGATTTTGAATACATGTTTTTTTTAGGATGCATTGCACCAAATAGATATCCTGGAAT
TGAAAGTGCAACCTATAAAG

Product: heterosulfide reductase subunit C1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MVLKSSEFNPDFPKQIIESGEWIFGDHASSFQKCYQCGTCTGACPSGRITALRTRKLIRSALAGIDSILSGDDLWMCTTC
YECYEKCPREVKITDIIKIIRNIAAEKGYIAEPHRKTSLLVFKTGHAVPVNDEIKKARLAIGLTEIPPTTHKYPEALEIV
RDIMEDLNFCKKVGICRETMDLEPLNVQKSEE

Sequences:

>Translated_192_residues
MVLKSSEFNPDFPKQIIESGEWIFGDHASSFQKCYQCGTCTGACPSGRITALRTRKLIRSALAGIDSILSGDDLWMCTTC
YECYEKCPREVKITDIIKIIRNIAAEKGYIAEPHRKTSLLVFKTGHAVPVNDEIKKARLAIGLTEIPPTTHKYPEALEIV
RDIMEDLNFCKKVGICRETMDLEPLNVQKSEE
>Mature_192_residues
MVLKSSEFNPDFPKQIIESGEWIFGDHASSFQKCYQCGTCTGACPSGRITALRTRKLIRSALAGIDSILSGDDLWMCTTC
YECYEKCPREVKITDIIKIIRNIAAEKGYIAEPHRKTSLLVFKTGHAVPVNDEIKKARLAIGLTEIPPTTHKYPEALEIV
RDIMEDLNFCKKVGICRETMDLEPLNVQKSEE

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B) [H]

COG id: COG1150

COG function: function code C; Heterodisulfide reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017680
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: NA

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 21600; Mature: 21600

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLKSSEFNPDFPKQIIESGEWIFGDHASSFQKCYQCGTCTGACPSGRITALRTRKLIRS
CCCCCCCCCCCHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
ALAGIDSILSGDDLWMCTTCYECYEKCPREVKITDIIKIIRNIAAEKGYIAEPHRKTSLL
HHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VFKTGHAVPVNDEIKKARLAIGLTEIPPTTHKYPEALEIVRDIMEDLNFCKKVGICRETM
EEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DLEPLNVQKSEE
CCCCCCCCCCCC
>Mature Secondary Structure
MVLKSSEFNPDFPKQIIESGEWIFGDHASSFQKCYQCGTCTGACPSGRITALRTRKLIRS
CCCCCCCCCCCHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
ALAGIDSILSGDDLWMCTTCYECYEKCPREVKITDIIKIIRNIAAEKGYIAEPHRKTSLL
HHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VFKTGHAVPVNDEIKKARLAIGLTEIPPTTHKYPEALEIVRDIMEDLNFCKKVGICRETM
EEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DLEPLNVQKSEE
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]