Definition Methanococcus maripaludis S2 chromosome, complete genome.
Accession NC_005791
Length 1,661,137

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The map label for this gene is fdxA

Identifier: 45358703

GI number: 45358703

Start: 1129653

End: 1129898

Strand: Direct

Name: fdxA

Synonym: MMP1140

Alternate gene names: NA

Gene position: 1129653-1129898 (Clockwise)

Preceding gene: 45358702

Following gene: 45358704

Centisome position: 68.0

GC content: 33.74

Gene sequence:

>246_bases
ATGACTGTAGAAATTATCGTTGATAAGGAAAAATGCACGGGTTGCGGTAAATGTTACGATAAGTGTCCAAAAGGCCCTAG
AATTTATAAAAAAGACAAAGACGGAAAATATTATGCATTTGATGTTTCAGATTGTCACAACTGTAAAATTTGCGTTGCAG
CATGCCCTGTTGGTGCAATACAGGTTAATTTGAAAAGACATATTCTTGAAAAACAAGTGCACAAATTAAAAGAAAAATTC
CAGTGA

Upstream 100 bases:

>100_bases
TTTGACGATTTTAGGAAGGATAGTGTTAAATATATTTCAATGCCATTATTAATTAGAACTAAATCTGTTAAAAATTCAGA
AAATTTCAAACGTGAGAGTT

Downstream 100 bases:

>100_bases
TTTCATTCAACTTTTTTAAAGGATCAAAAAATACATATAACAATATTTCAAAACACTTTCGTCAATAGTTATTTTCAGAT
CAATTTTAAAACCCCCAACT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MTVEIIVDKEKCTGCGKCYDKCPKGPRIYKKDKDGKYYAFDVSDCHNCKICVAACPVGAIQVNLKRHILEKQVHKLKEKF
Q

Sequences:

>Translated_81_residues
MTVEIIVDKEKCTGCGKCYDKCPKGPRIYKKDKDGKYYAFDVSDCHNCKICVAACPVGAIQVNLKRHILEKQVHKLKEKF
Q
>Mature_80_residues
TVEIIVDKEKCTGCGKCYDKCPKGPRIYKKDKDGKYYAFDVSDCHNCKICVAACPVGAIQVNLKRHILEKQVHKLKEKFQ

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons probably in the CO-dehydrogenase complex [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 9250; Mature: 9119

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
11.1 %Cys+Met (Translated Protein)
10.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVEIIVDKEKCTGCGKCYDKCPKGPRIYKKDKDGKYYAFDVSDCHNCKICVAACPVGAI
CEEEEEEECCCCCCCCHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCEEEEEECCCCEE
QVNLKRHILEKQVHKLKEKFQ
EEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVEIIVDKEKCTGCGKCYDKCPKGPRIYKKDKDGKYYAFDVSDCHNCKICVAACPVGAI
EEEEEEECCCCCCCCHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCEEEEEECCCCEE
QVNLKRHILEKQVHKLKEKFQ
EEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]