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The map label for this gene is rpl15 [H]

Identifier: 45357861

GI number: 45357861

Start: 297985

End: 298569

Strand: Direct

Name: rpl15 [H]

Synonym: MMP0298

Alternate gene names: 45357861

Gene position: 297985-298569 (Clockwise)

Preceding gene: 45357858

Following gene: 45357862

Centisome position: 17.94

GC content: 38.12

Gene sequence:

>585_bases
ATGAGTATGTACAACTACGTGAAAGAAGCATGGAAAGTACCTGCTAACTCATACGTTAAAGAGTTACAATGGGCTAGAAT
GCAAGACTGGAGAAAAGAACCTTCAGTATTAAGAATTGAAAGACCTACAAGAATTGATAGGGCTAGAAACTTAGGATACA
AAGCAAAACAAGGAATTGTTGTTGTAAGAGTTAGTGTTAGAAGAGGAGGTTTAAGAAAACCAAGACCAAAACACTCCAAA
AAACCTGCAACATTAGGTATCAACAAAATTACAATGGCAAAATCCATTCAAAGAATTGCTGAAGAAAGAGCAGCTAAAAG
ATACCCTAACATGGAAGTATTAAACTCCTACTGGGTAGGACAAGATGGAAAACAAAAATGGTATGAAATAATCTTAGTTG
ACCCATGCCACCCATCGATCAAAAACGACAAATCCTACAGCTGGCTCTCCACCGGAAACCACAAAGGAAGAGCAAACAGA
GGTTTAACCTCAGCTGGTAAAAAAGGAAGAGGATTAATGTACAAAGGAAAAGGTGCCGAAAAAGCAAGACCTGGTGTCAG
AGCTAACGGCAAAAAAACGAAATAA

Upstream 100 bases:

>100_bases
AAGACTAGGTTATACTAGTAGTTTAGTGACGGGTGAATTCCCGTAGGGCATGTAGCATTAAGCTGAACCCATAAACAGAA
TCGACGAAACAAGTGATACC

Downstream 100 bases:

>100_bases
TTAAATTTCCTTTATTTTAATTCTTTTAATTAACTTTTTTAGTTTTTATTTTACTCGAATTTACTTGATTTTTATACGAC
AATTACTATTTACTTTTTTA

Product: 50S ribosomal protein L15e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVLRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK
KPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVGQDGKQKWYEIILVDPCHPSIKNDKSYSWLSTGNHKGRANR
GLTSAGKKGRGLMYKGKGAEKARPGVRANGKKTK

Sequences:

>Translated_194_residues
MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVLRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK
KPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVGQDGKQKWYEIILVDPCHPSIKNDKSYSWLSTGNHKGRANR
GLTSAGKKGRGLMYKGKGAEKARPGVRANGKKTK
>Mature_193_residues
SMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVLRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSKK
PATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVGQDGKQKWYEIILVDPCHPSIKNDKSYSWLSTGNHKGRANRG
LTSAGKKGRGLMYKGKGAEKARPGVRANGKKTK

Specific function: Unknown

COG id: COG1632

COG function: function code J; Ribosomal protein L15E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15e family [H]

Homologues:

Organism=Homo sapiens, GI15431293, Length=180, Percent_Identity=45, Blast_Score=157, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI17541432, Length=180, Percent_Identity=45, Blast_Score=130, Evalue=4e-31,
Organism=Saccharomyces cerevisiae, GI6323057, Length=174, Percent_Identity=44.8275862068966, Blast_Score=155, Evalue=5e-39,
Organism=Saccharomyces cerevisiae, GI6323769, Length=174, Percent_Identity=44.8275862068966, Blast_Score=155, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000439
- InterPro:   IPR020926
- InterPro:   IPR020925
- InterPro:   IPR012678 [H]

Pfam domain/function: PF00827 Ribosomal_L15e [H]

EC number: NA

Molecular weight: Translated: 22220; Mature: 22089

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: PS01194 RIBOSOMAL_L15E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVLRIERPTRIDRARNLGYKAKQGIV
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCEE
VVRVSVRRGGLRKPRPKHSKKPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVG
EEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
QDGKQKWYEIILVDPCHPSIKNDKSYSWLSTGNHKGRANRGLTSAGKKGRGLMYKGKGAE
CCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
KARPGVRANGKKTK
CCCCCCCCCCCCCC
>Mature Secondary Structure 
SMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVLRIERPTRIDRARNLGYKAKQGIV
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCEE
VVRVSVRRGGLRKPRPKHSKKPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVG
EEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
QDGKQKWYEIILVDPCHPSIKNDKSYSWLSTGNHKGRANRGLTSAGKKGRGLMYKGKGAE
CCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
KARPGVRANGKKTK
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA