| Definition | Methanococcus maripaludis S2 chromosome, complete genome. |
|---|---|
| Accession | NC_005791 |
| Length | 1,661,137 |
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The map label for this gene is 45357799
Identifier: 45357799
GI number: 45357799
Start: 243562
End: 243960
Strand: Direct
Name: 45357799
Synonym: MMP0236
Alternate gene names: NA
Gene position: 243562-243960 (Clockwise)
Preceding gene: 45357798
Following gene: 45357800
Centisome position: 14.66
GC content: 31.33
Gene sequence:
>399_bases ATGTCAAAAGGACAGGTTTCAGTAGAATTTATCGTATTATTTTTAGCACTTCTTGTAGCGGTTGTTGTATCTACAATGAC TCCAGGAATTTTTGGATTGAATAAATCTGTAGAGTTATCTTCTGCAAGTTTAGCTCACGCTGCACTTTCAAAAGTTAAAT CAAACATTGAAATTCTTTCTGTTTCGGGAGAAGGATCTTATAAACTAGTTTATGTAAAATCTCCCCCTGCAAACTGGACA TTTGAAAATAGAACGATTCGAGTTTACGGAAATGGTTTTAATATATCTACCAATACTTCAGTAGATTTAAACACGTATAA TTATCTGGCTTCTTCATTAAAAATATTGAGTGTTAATTTAACAAGGAATGATAAAAATGTTACAGTTGCCATTCAATAA
Upstream 100 bases:
>100_bases AAGTTTTTCATACAAAATGTATTGGTATGCTGAAGAAGAAGACACAAAAGACATCTGGATGCTTTAAACTACCTATTTTT AATTTTTGAGGAATGTTAAA
Downstream 100 bases:
>100_bases AAAAGGACAGGTTTCATTCGATTTCATAATTGCAATGTTATTTCTTTTATTGATTTTTGCATTTATGGGTCAAAATGTAC TAAATATGGCAAAATCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSKGQVSVEFIVLFLALLVAVVVSTMTPGIFGLNKSVELSSASLAHAALSKVKSNIEILSVSGEGSYKLVYVKSPPANWT FENRTIRVYGNGFNISTNTSVDLNTYNYLASSLKILSVNLTRNDKNVTVAIQ
Sequences:
>Translated_132_residues MSKGQVSVEFIVLFLALLVAVVVSTMTPGIFGLNKSVELSSASLAHAALSKVKSNIEILSVSGEGSYKLVYVKSPPANWT FENRTIRVYGNGFNISTNTSVDLNTYNYLASSLKILSVNLTRNDKNVTVAIQ >Mature_131_residues SKGQVSVEFIVLFLALLVAVVVSTMTPGIFGLNKSVELSSASLAHAALSKVKSNIEILSVSGEGSYKLVYVKSPPANWTF ENRTIRVYGNGFNISTNTSVDLNTYNYLASSLKILSVNLTRNDKNVTVAIQ
Specific function: Unknown
COG id: COG1991
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0333 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007166 [H]
Pfam domain/function: PF04021 Class_IIIsignal [H]
EC number: NA
Molecular weight: Translated: 14247; Mature: 14115
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKGQVSVEFIVLFLALLVAVVVSTMTPGIFGLNKSVELSSASLAHAALSKVKSNIEILS CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEECCHHHHHHHHHHHHCCEEEEE VSGEGSYKLVYVKSPPANWTFENRTIRVYGNGFNISTNTSVDLNTYNYLASSLKILSVNL ECCCCCEEEEEEECCCCCCEECCCEEEEEECCEEECCCCEEEECHHHHHHCCEEEEEEEE TRNDKNVTVAIQ ECCCCEEEEEEC >Mature Secondary Structure SKGQVSVEFIVLFLALLVAVVVSTMTPGIFGLNKSVELSSASLAHAALSKVKSNIEILS CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEECCHHHHHHHHHHHHCCEEEEE VSGEGSYKLVYVKSPPANWTFENRTIRVYGNGFNISTNTSVDLNTYNYLASSLKILSVNL ECCCCCEEEEEEECCCCCCEECCCEEEEEECCEEECCCCEEEECHHHHHHCCEEEEEEEE TRNDKNVTVAIQ ECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]