Click here to switch to the map view.

The map label for this gene is 45357798

Identifier: 45357798

GI number: 45357798

Start: 242635

End: 243528

Strand: Direct

Name: 45357798

Synonym: MMP0235

Alternate gene names: NA

Gene position: 242635-243528 (Clockwise)

Preceding gene: 45357797

Following gene: 45357799

Centisome position: 14.61

GC content: 33.33

Gene sequence:

>894_bases
ATGAAAATGCTTAATATAAAATATTTAACTATTTTTTTATTTTTAATATCAATAATTCCAAATGCACATTCTGAAACTAC
AGTTGCTACAATGGATACTTATTGGAGTTTAACTGGTGAAATTACAAACGAATACCCATATTCCGTATTCATAACGATTC
CAGAAGAAATTGAATATATCGAGAAAGATTTAAAATCTTCAAAAAATTTCATGGAATTAACAAATGGTGAGAGTGACGAT
GACGACGAAGAAGAGTCTACCGACCCAGTTACATTTGATATCACTCCAAAATCAGAATTAAATGGGCAGGAAGGATTTTG
GATTCCTCCCTATACGACTGCAAATATAAAGATGTATTCTACAAGGGTTGACGTATTAACTACAAATGAAGATGACGACG
AAGAAGATGACGACGAAGTGGTTCGAACAATGGAGATATCTGGCCCTGCAGCGTATCCAAAAACAAAACTCATTGATTTA
AGTGAAATAATTCCTGCATCTAAAAAAGATAAAATAGAGCTCGATAATTTTAAACTTTATGTGAAAGGCTCAATAGTTAA
AAATGATACCGATGTGCTGAGTATTTTGATACCTGCACCAATTGTATTAAAGGATTACAGCACTTGTGATAAATTTATCA
GCAAATATTCAGTAAATACCTGGGTAGATTCATATTCCGACTGGGTAACTGATCACAACGAATTAAGCAGTTATGGATCA
ACAATGCTCGATAACACACTTGTTCCTGTGTTTGACTTAGGCCCTGGGTTTTACAAAACATTTGATGTCCCTGCACTCGT
ATATACTACTTCATCAAATCAAGAATTAAGTTTTTCATACAAAATGTATTGGTATGCTGAAGAAGAAGACACAAAAGACA
TCTGGATGCTTTAA

Upstream 100 bases:

>100_bases
ATTACTTATTAATAGTTGCAGTTCCATCAGAAAAAGTTTCAAACTTGGTTGCAGTAAACAGTGAGGACCTCTACATTGTA
AAAGCAGCAGGTGGTAACTG

Downstream 100 bases:

>100_bases
ACTACCTATTTTTAATTTTTGAGGAATGTTAAAATGTCAAAAGGACAGGTTTCAGTAGAATTTATCGTATTATTTTTAGC
ACTTCTTGTAGCGGTTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKMLNIKYLTIFLFLISIIPNAHSETTVATMDTYWSLTGEITNEYPYSVFITIPEEIEYIEKDLKSSKNFMELTNGESDD
DDEEESTDPVTFDITPKSELNGQEGFWIPPYTTANIKMYSTRVDVLTTNEDDDEEDDDEVVRTMEISGPAAYPKTKLIDL
SEIIPASKKDKIELDNFKLYVKGSIVKNDTDVLSILIPAPIVLKDYSTCDKFISKYSVNTWVDSYSDWVTDHNELSSYGS
TMLDNTLVPVFDLGPGFYKTFDVPALVYTTSSNQELSFSYKMYWYAEEEDTKDIWML

Sequences:

>Translated_297_residues
MKMLNIKYLTIFLFLISIIPNAHSETTVATMDTYWSLTGEITNEYPYSVFITIPEEIEYIEKDLKSSKNFMELTNGESDD
DDEEESTDPVTFDITPKSELNGQEGFWIPPYTTANIKMYSTRVDVLTTNEDDDEEDDDEVVRTMEISGPAAYPKTKLIDL
SEIIPASKKDKIELDNFKLYVKGSIVKNDTDVLSILIPAPIVLKDYSTCDKFISKYSVNTWVDSYSDWVTDHNELSSYGS
TMLDNTLVPVFDLGPGFYKTFDVPALVYTTSSNQELSFSYKMYWYAEEEDTKDIWML
>Mature_297_residues
MKMLNIKYLTIFLFLISIIPNAHSETTVATMDTYWSLTGEITNEYPYSVFITIPEEIEYIEKDLKSSKNFMELTNGESDD
DDEEESTDPVTFDITPKSELNGQEGFWIPPYTTANIKMYSTRVDVLTTNEDDDEEDDDEVVRTMEISGPAAYPKTKLIDL
SEIIPASKKDKIELDNFKLYVKGSIVKNDTDVLSILIPAPIVLKDYSTCDKFISKYSVNTWVDSYSDWVTDHNELSSYGS
TMLDNTLVPVFDLGPGFYKTFDVPALVYTTSSNQELSFSYKMYWYAEEEDTKDIWML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34060; Mature: 34060

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMLNIKYLTIFLFLISIIPNAHSETTVATMDTYWSLTGEITNEYPYSVFITIPEEIEYI
CCEEEHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCHHHHHH
EKDLKSSKNFMELTNGESDDDDEEESTDPVTFDITPKSELNGQEGFWIPPYTTANIKMYS
HHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCEEECCCCCCEEEEEE
TRVDVLTTNEDDDEEDDDEVVRTMEISGPAAYPKTKLIDLSEIIPASKKDKIELDNFKLY
EEEEEEECCCCCCCCCHHHEEEEEECCCCCCCCCCEEEEHHHHCCCCCCCCEEECCEEEE
VKGSIVKNDTDVLSILIPAPIVLKDYSTCDKFISKYSVNTWVDSYSDWVTDHNELSSYGS
EEEEEEECCCCEEEEEECCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHCC
TMLDNTLVPVFDLGPGFYKTFDVPALVYTTSSNQELSFSYKMYWYAEEEDTKDIWML
HHHCCCCCEEEECCCCCEEEECCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKMLNIKYLTIFLFLISIIPNAHSETTVATMDTYWSLTGEITNEYPYSVFITIPEEIEYI
CCEEEHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCHHHHHH
EKDLKSSKNFMELTNGESDDDDEEESTDPVTFDITPKSELNGQEGFWIPPYTTANIKMYS
HHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCEEECCCCCCEEEEEE
TRVDVLTTNEDDDEEDDDEVVRTMEISGPAAYPKTKLIDLSEIIPASKKDKIELDNFKLY
EEEEEEECCCCCCCCCHHHEEEEEECCCCCCCCCCEEEEHHHHCCCCCCCCEEECCEEEE
VKGSIVKNDTDVLSILIPAPIVLKDYSTCDKFISKYSVNTWVDSYSDWVTDHNELSSYGS
EEEEEEECCCCEEEEEECCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHCC
TMLDNTLVPVFDLGPGFYKTFDVPALVYTTSSNQELSFSYKMYWYAEEEDTKDIWML
HHHCCCCCEEEECCCCCEEEECCCEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]