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The map label for this gene is yfbS [H]

Identifier: 45357715

GI number: 45357715

Start: 162132

End: 163472

Strand: Direct

Name: yfbS [H]

Synonym: MMP0152

Alternate gene names: 45357715

Gene position: 162132-163472 (Clockwise)

Preceding gene: 45357714

Following gene: 45357718

Centisome position: 9.76

GC content: 40.57

Gene sequence:

>1341_bases
ATGAAAAAAGCACTGATTTTACTCGTGCTCGCCGTATTTTTAATTGGCTTTACAAAGATCGCGTACGTGGATGAAGAATC
TGCTGACGGAATAAACAGCCAAAAAGCGATAATTACACTTATAATTCTTGGAACTGCGGCTGTGTTATTTTTCACAGAAG
CGCTTCCACTGCCTGTTACCGCAATGTTAGTTCCGGTGGCTTTGAGTTTTCCAGGGATAGATATTTTATCGAGTTCTCGG
GCCTTTGCCGATTTTGGAAATAAATGGGTGGTCCTGTTTATGGCCGCATTTATACTTGGTGAAGCAGTATTTAGAACTGG
TTTTGCAGATAAAATCGGGCAACTTACCGTGAAAGCAGCAGGAAAGAGCCAGTTAAAATTAATGCTTCTTGTAATGCTTG
CAATCGGTACGATGTCTGCATTTTTATCGAACACCGGAACAACAGCAGCATTTATTCCTATTGTAATGGGTATATGTGTT
TCTGCAAGTTTAAAGCCCGGAAAATTGTTAATTCCTATGGCTTATGCTGCATCGCTTGGTGGAACGTTAACTTTAATTGG
AACTCCTCCAAACGGGCTTGTAAACGATGCACTTGAAAAATCAGGGATTGCTCCATTTGGGTTTTTCGAGTTTGCAAAAA
TTGGAATTCTTATATTTATCGTAGGGATTCTTTACTATGGAACAATTGGGCACAAATTACTGCCTGAATCTAAGGCAAAA
GCAAAAGATTTTGTGTCAGATACTTTGAAATACCGAACTAACAAGATGTGGATTGCAACACTCGTGTTTACATTCGTTGT
ATTAATGACAGCAACTGGAACGATCCCGCTTGTAACTGCATTCATGCTTGGTGCGTGTATGGTTGTAATGACTGGATGTA
TCACGATGCAGGAAGCTTTTAACAGTATTTCGTGGACAACAATCTTTTTGTTTGCAGGAATGCTTCCACTTGGAAGTGCA
ATGGCGGCAACTGGTGCAGCTACAATGATTGCAAACACGGTTATTACGTATGTTCACAGCCCATTAGCACTTTTAGCCGC
AGCATACATACTGACTGCATTAATTACCGAAGTAATGTCAAACACTGCAACAGCTGCCTTGGTAATGCCTCTTGGAATTG
CTCTTGCAGATGCGTTTGACGTTAGTGCAAAACCGATATTGATGGCAATTGCAGTTGCAGCATCTTCATGTTTCCTAACT
CCAATTGCAACGCCTCCAAACATGATCATACTTGGTCCCGGAGGTTATTCATTTAAAGATTACGCAAAATCAGGATGGCC
ACTTGAAATACTTTGTGCAGTAGTTGCAATTGCAGTTATTCCAATGATATGGCCATTTTAA

Upstream 100 bases:

>100_bases
TTTTATATGCATTCTCATTTTACACGATTTTTCAAAAAGTTTTTCTAATGTCGATTCGACGAGGTGAATTTATCGAAATT
TAGATAAAAGAGGTGATTTT

Downstream 100 bases:

>100_bases
TTCTATTTTTTTTTATTGATTTTATTGATAATACTAATTTTAAAAAATATGATTTTCAGTATGATTTTTTTTTAATTCGT
AATAATTATATACTATAAAT

Product: citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKKALILLVLAVFLIGFTKIAYVDEESADGINSQKAIITLIILGTAAVLFFTEALPLPVTAMLVPVALSFPGIDILSSSR
AFADFGNKWVVLFMAAFILGEAVFRTGFADKIGQLTVKAAGKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFIPIVMGICV
SASLKPGKLLIPMAYAASLGGTLTLIGTPPNGLVNDALEKSGIAPFGFFEFAKIGILIFIVGILYYGTIGHKLLPESKAK
AKDFVSDTLKYRTNKMWIATLVFTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAFNSISWTTIFLFAGMLPLGSA
MAATGAATMIANTVITYVHSPLALLAAAYILTALITEVMSNTATAALVMPLGIALADAFDVSAKPILMAIAVAASSCFLT
PIATPPNMIILGPGGYSFKDYAKSGWPLEILCAVVAIAVIPMIWPF

Sequences:

>Translated_446_residues
MKKALILLVLAVFLIGFTKIAYVDEESADGINSQKAIITLIILGTAAVLFFTEALPLPVTAMLVPVALSFPGIDILSSSR
AFADFGNKWVVLFMAAFILGEAVFRTGFADKIGQLTVKAAGKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFIPIVMGICV
SASLKPGKLLIPMAYAASLGGTLTLIGTPPNGLVNDALEKSGIAPFGFFEFAKIGILIFIVGILYYGTIGHKLLPESKAK
AKDFVSDTLKYRTNKMWIATLVFTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAFNSISWTTIFLFAGMLPLGSA
MAATGAATMIANTVITYVHSPLALLAAAYILTALITEVMSNTATAALVMPLGIALADAFDVSAKPILMAIAVAASSCFLT
PIATPPNMIILGPGGYSFKDYAKSGWPLEILCAVVAIAVIPMIWPF
>Mature_446_residues
MKKALILLVLAVFLIGFTKIAYVDEESADGINSQKAIITLIILGTAAVLFFTEALPLPVTAMLVPVALSFPGIDILSSSR
AFADFGNKWVVLFMAAFILGEAVFRTGFADKIGQLTVKAAGKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFIPIVMGICV
SASLKPGKLLIPMAYAASLGGTLTLIGTPPNGLVNDALEKSGIAPFGFFEFAKIGILIFIVGILYYGTIGHKLLPESKAK
AKDFVSDTLKYRTNKMWIATLVFTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAFNSISWTTIFLFAGMLPLGSA
MAATGAATMIANTVITYVHSPLALLAAAYILTALITEVMSNTATAALVMPLGIALADAFDVSAKPILMAIAVAASSCFLT
PIATPPNMIILGPGGYSFKDYAKSGWPLEILCAVVAIAVIPMIWPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Homo sapiens, GI301069349, Length=281, Percent_Identity=26.6903914590747, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1788629, Length=222, Percent_Identity=34.2342342342342, Blast_Score=128, Evalue=7e-31,
Organism=Caenorhabditis elegans, GI32565804, Length=139, Percent_Identity=31.6546762589928, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71988385, Length=139, Percent_Identity=31.6546762589928, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680
- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF03600 CitMHS; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 46877; Mature: 46877

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALILLVLAVFLIGFTKIAYVDEESADGINSQKAIITLIILGTAAVLFFTEALPLPVT
CCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
AMLVPVALSFPGIDILSSSRAFADFGNKWVVLFMAAFILGEAVFRTGFADKIGQLTVKAA
HHHHHHHHCCCCCHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEECC
GKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFIPIVMGICVSASLKPGKLLIPMAYAASLG
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCC
GTLTLIGTPPNGLVNDALEKSGIAPFGFFEFAKIGILIFIVGILYYGTIGHKLLPESKAK
CEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AKDFVSDTLKYRTNKMWIATLVFTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAF
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSISWTTIFLFAGMLPLGSAMAATGAATMIANTVITYVHSPLALLAAAYILTALITEVMS
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
NTATAALVMPLGIALADAFDVSAKPILMAIAVAASSCFLTPIATPPNMIILGPGGYSFKD
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCCCCCEEEECCCCCCHHH
YAKSGWPLEILCAVVAIAVIPMIWPF
HHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKALILLVLAVFLIGFTKIAYVDEESADGINSQKAIITLIILGTAAVLFFTEALPLPVT
CCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
AMLVPVALSFPGIDILSSSRAFADFGNKWVVLFMAAFILGEAVFRTGFADKIGQLTVKAA
HHHHHHHHCCCCCHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEECC
GKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFIPIVMGICVSASLKPGKLLIPMAYAASLG
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCC
GTLTLIGTPPNGLVNDALEKSGIAPFGFFEFAKIGILIFIVGILYYGTIGHKLLPESKAK
CEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AKDFVSDTLKYRTNKMWIATLVFTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAF
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSISWTTIFLFAGMLPLGSAMAATGAATMIANTVITYVHSPLALLAAAYILTALITEVMS
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
NTATAALVMPLGIALADAFDVSAKPILMAIAVAASSCFLTPIATPPNMIILGPGGYSFKD
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCCCCCEEEECCCCCCHHH
YAKSGWPLEILCAVVAIAVIPMIWPF
HHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]