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The map label for this gene is rpl40e

Identifier: 45357714

GI number: 45357714

Start: 161607

End: 161750

Strand: Direct

Name: rpl40e

Synonym: MMP0151

Alternate gene names: 45357714

Gene position: 161607-161750 (Clockwise)

Preceding gene: 45357713

Following gene: 45357715

Centisome position: 9.73

GC content: 34.03

Gene sequence:

>144_bases
ATGGCATTCGAAGAAGCAATCAAAAGAGTCTTCATGAAAAAGATTTGCATGAAATGTAACTCAAGAAACTCATGGAAAGC
TACAAAATGTAGAAAATGTGGATACACAAATTTAAGGCCTAAAGCTAAAGAAGCTAGGGCATAA

Upstream 100 bases:

>100_bases
GTTAATAAAGAATTACTTGAACAGTATTGTGGAAAAACATCTGATGAAATCATTAGGATTCAGAACGAAATTTTAAATAA
CATGCGAAACAGGTGAAATA

Downstream 100 bases:

>100_bases
TCCATTACTTTTCTTTTTTGGTTTAAATTTATATTCTATTTTGTAAAATCGCTTTTTTAACGAATTATTTTTCAAGTTTA
ACGAATTATTCTATTCTGAT

Product: 50S ribosomal protein L40e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 47; Mature: 46

Protein sequence:

>47_residues
MAFEEAIKRVFMKKICMKCNSRNSWKATKCRKCGYTNLRPKAKEARA

Sequences:

>Translated_47_residues
MAFEEAIKRVFMKKICMKCNSRNSWKATKCRKCGYTNLRPKAKEARA
>Mature_46_residues
AFEEAIKRVFMKKICMKCNSRNSWKATKCRKCGYTNLRPKAKEARA

Specific function: Unknown

COG id: COG1552

COG function: function code J; Ribosomal protein L40E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L40e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL40_METM5 (A4G037)

Other databases:

- EMBL:   CP000609
- RefSeq:   YP_001098035.1
- ProteinModelPortal:   A4G037
- SMR:   A4G037
- STRING:   A4G037
- GeneID:   4928811
- GenomeReviews:   CP000609_GR
- KEGG:   mmq:MmarC5_1524
- eggNOG:   arNOG14274
- HOGENOM:   HBG391745
- ProtClustDB:   PRK04136
- BioCyc:   MMAR402880:MMARC5_1524-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00788
- InterPro:   IPR001975

Pfam domain/function: PF01020 Ribosomal_L40e

EC number: NA

Molecular weight: Translated: 5528; Mature: 5397

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.5 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
14.9 %Cys+Met (Translated Protein)
8.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
13.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFEEAIKRVFMKKICMKCNSRNSWKATKCRKCGYTNLRPKAKEARA
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AFEEAIKRVFMKKICMKCNSRNSWKATKCRKCGYTNLRPKAKEARA
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA