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The map label for this gene is fni

Identifier: 45357606

GI number: 45357606

Start: 60428

End: 61495

Strand: Direct

Name: fni

Synonym: MMP0043

Alternate gene names: 45357606

Gene position: 60428-61495 (Clockwise)

Preceding gene: 45357600

Following gene: 45357607

Centisome position: 3.64

GC content: 36.14

Gene sequence:

>1068_bases
GTGAATAATAATAGCATTGAATATAGAAAGTTGGAACACCTTATTGTGTGCGACCACTGTGACGTGGAGTATAAAAAAGG
GACCCTTCTTGAGGACGTTGAATTAATTCACAGCGGTATATCAAACTGCGATTTAGACGATATCGATACATCTATCGAAA
TTTTTGGAAAAAAATTAAATGCTCCGTTAATTGTAGCAGCAATAACTGGTGGACACCCTAAAGCAAAGGAAGTCAATAAA
AATATTGCTATTGCTGTTGAGGAACTGAATTTAGGTATGGGTGTAGGTTCACAAAGGGCGGCTATATCAAAAAGCTACCT
TGAAGATACCTATTCTGTTGTAAGGGATCACACTTCCTCATTAATTATCGGAAACCTTGGAGCAGTTAACTTTGTGGAAG
ATTCATGGGATGAAGAAATTATTTCAAAGTCTGTAGAAATGATTGATGCAGATGCCATGGCGATTCATTTCAATCCACTA
CAGGAAGCTATACAGCCTGAAGGCGATGTAAACTTCAAAGGACTTAATATTTTAAAAGAAATAATTTCAAATTACAATAA
AATTCACGGAAAAATTCCATTTATCGCAAAGCAGGTTGGCGAAGGATTTTCAAAAAAAGATGCCATTTTTTTAAAAGAAA
TTGGCTTTGATGCGATAGATGTCGGCGGAAGCGGCGGAACTTCATGGGCTGCTGTAGAGCTTTACAGGATAAAAGATGAA
GAGCAGAAGAATTTTTCAAACCAGTATTTTAACTGGGGAATTCCAACTGCCGCATCAATTCTGGAAGTAAATTCAGCCTT
TTCAGGACCGATAATTGCAACAGGCGGAATCAGGACTGGAATCGATATTGCAAAATCAATTTCAATTGGTGCAAACTGCT
GTGGAACTGCTTTACCAATTTTAAAAGCAGCATTAAAGTCTTCAGAAGCTGTTACAACTGTTCTAGAGAGAATGATTAAA
GAGTTAAAAACTACAATGTTTTTGACAGGCTGTAATAATATAAACGAACTAAAATCTGCCAGATATATTTTAAAAGGCGA
TTTAAAGAATTGGAAGGATCAGATTTAA

Upstream 100 bases:

>100_bases
TTTATTCTTTCATCTGGAAAAGCTTTTTATCATTTACCAGCCCTTGTTTTTATAACTGTAATTTTTCGGACTTTAGATAA
TAATATATAGGTGGTTATTC

Downstream 100 bases:

>100_bases
TAATTTAAATATTATCCATCGGAATTTTTTCAATTTATTTATTCATGTATTCAAAGCAAAGGATGTGATAATTTGCAGTT
AGAAGTAGTCGCAATAGGTG

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNNNSIEYRKLEHLIVCDHCDVEYKKGTLLEDVELIHSGISNCDLDDIDTSIEIFGKKLNAPLIVAAITGGHPKAKEVNK
NIAIAVEELNLGMGVGSQRAAISKSYLEDTYSVVRDHTSSLIIGNLGAVNFVEDSWDEEIISKSVEMIDADAMAIHFNPL
QEAIQPEGDVNFKGLNILKEIISNYNKIHGKIPFIAKQVGEGFSKKDAIFLKEIGFDAIDVGGSGGTSWAAVELYRIKDE
EQKNFSNQYFNWGIPTAASILEVNSAFSGPIIATGGIRTGIDIAKSISIGANCCGTALPILKAALKSSEAVTTVLERMIK
ELKTTMFLTGCNNINELKSARYILKGDLKNWKDQI

Sequences:

>Translated_355_residues
MNNNSIEYRKLEHLIVCDHCDVEYKKGTLLEDVELIHSGISNCDLDDIDTSIEIFGKKLNAPLIVAAITGGHPKAKEVNK
NIAIAVEELNLGMGVGSQRAAISKSYLEDTYSVVRDHTSSLIIGNLGAVNFVEDSWDEEIISKSVEMIDADAMAIHFNPL
QEAIQPEGDVNFKGLNILKEIISNYNKIHGKIPFIAKQVGEGFSKKDAIFLKEIGFDAIDVGGSGGTSWAAVELYRIKDE
EQKNFSNQYFNWGIPTAASILEVNSAFSGPIIATGGIRTGIDIAKSISIGANCCGTALPILKAALKSSEAVTTVLERMIK
ELKTTMFLTGCNNINELKSARYILKGDLKNWKDQI
>Mature_355_residues
MNNNSIEYRKLEHLIVCDHCDVEYKKGTLLEDVELIHSGISNCDLDDIDTSIEIFGKKLNAPLIVAAITGGHPKAKEVNK
NIAIAVEELNLGMGVGSQRAAISKSYLEDTYSVVRDHTSSLIIGNLGAVNFVEDSWDEEIISKSVEMIDADAMAIHFNPL
QEAIQPEGDVNFKGLNILKEIISNYNKIHGKIPFIAKQVGEGFSKKDAIFLKEIGFDAIDVGGSGGTSWAAVELYRIKDE
EQKNFSNQYFNWGIPTAASILEVNSAFSGPIIATGGIRTGIDIAKSISIGANCCGTALPILKAALKSSEAVTTVLERMIK
ELKTTMFLTGCNNINELKSARYILKGDLKNWKDQI

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IDI2_METMP (Q6M174)

Other databases:

- EMBL:   BX950229
- RefSeq:   NP_987163.1
- ProteinModelPortal:   Q6M174
- SMR:   Q6M174
- GeneID:   2761304
- GenomeReviews:   BX950229_GR
- KEGG:   mmp:MMP0043
- NMPDR:   fig|267377.1.peg.43
- HOGENOM:   HBG354479
- OMA:   GSQRAAI
- ProtClustDB:   PRK05437
- BioCyc:   MMAR267377:MMP0043-MONOMER
- BRENDA:   5.3.3.2
- GO:   GO:0005737
- HAMAP:   MF_00354
- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10578:SF3
- PIRSF:   PIRSF003314
- TIGRFAMs:   TIGR02151

Pfam domain/function: PF01070 FMN_dh

EC number: =5.3.3.2

Molecular weight: Translated: 38741; Mature: 38741

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNSIEYRKLEHLIVCDHCDVEYKKGTLLEDVELIHSGISNCDLDDIDTSIEIFGKKLN
CCCCCCCCEECCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
APLIVAAITGGHPKAKEVNKNIAIAVEELNLGMGVGSQRAAISKSYLEDTYSVVRDHTSS
CCEEEEEEECCCCCHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
LIIGNLGAVNFVEDSWDEEIISKSVEMIDADAMAIHFNPLQEAIQPEGDVNFKGLNILKE
EEEECCCCCCCHHCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCCCHHHHHHH
IISNYNKIHGKIPFIAKQVGEGFSKKDAIFLKEIGFDAIDVGGSGGTSWAAVELYRIKDE
HHHHHHHHCCCCCHHHHHHCCCCCCCCEEHHHHCCCCEEECCCCCCCCEEEEEEEECCCH
EQKNFSNQYFNWGIPTAASILEVNSAFSGPIIATGGIRTGIDIAKSISIGANCCGTALPI
HHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHH
LKAALKSSEAVTTVLERMIKELKTTMFLTGCNNINELKSARYILKGDLKNWKDQI
HHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure
MNNNSIEYRKLEHLIVCDHCDVEYKKGTLLEDVELIHSGISNCDLDDIDTSIEIFGKKLN
CCCCCCCCEECCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
APLIVAAITGGHPKAKEVNKNIAIAVEELNLGMGVGSQRAAISKSYLEDTYSVVRDHTSS
CCEEEEEEECCCCCHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
LIIGNLGAVNFVEDSWDEEIISKSVEMIDADAMAIHFNPLQEAIQPEGDVNFKGLNILKE
EEEECCCCCCCHHCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCCCHHHHHHH
IISNYNKIHGKIPFIAKQVGEGFSKKDAIFLKEIGFDAIDVGGSGGTSWAAVELYRIKDE
HHHHHHHHCCCCCHHHHHHCCCCCCCCEEHHHHCCCCEEECCCCCCCCEEEEEEEECCCH
EQKNFSNQYFNWGIPTAASILEVNSAFSGPIIATGGIRTGIDIAKSISIGANCCGTALPI
HHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHH
LKAALKSSEAVTTVLERMIKELKTTMFLTGCNNINELKSARYILKGDLKNWKDQI
HHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA