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The map label for this gene is 45357581

Identifier: 45357581

GI number: 45357581

Start: 27798

End: 28640

Strand: Direct

Name: 45357581

Synonym: MMP0018

Alternate gene names: NA

Gene position: 27798-28640 (Clockwise)

Preceding gene: 45357576

Following gene: 45357584

Centisome position: 1.67

GC content: 32.74

Gene sequence:

>843_bases
GTGAACAAATTATCTGAATCTGATTTAAGTGTGACCTTGAATATAAACTATAGAGGTAAACAGATCACGAAAACTCAAGT
CGAAATTTTAAAATCGGTTTCTGAAACCAGATCCCAGAACAGAACCGCTGAAATTCTGGGTATTCCCCCATCAACAGTCA
ATATTCAGATAAAAAGGCTTGAAAATAAGCTAGATTTAAAATTAACATTTTCTTCTCCTGCCGGAACCATGTTATCCCCC
GATGCAGAACGTATTGTATCATATTATAATGCATATCTTGAAAGAACGTCAAAAGAAAAATTTATTGCATGCGGATTTAT
AAGTGGAGAAGTGGGACGTATTCTTTTTGATGATGTGCTCGTTTCATCATTTTCTAATGTTTTGAGGCTTCACAGGTCAA
ATTTAACCAGTGTCGTTGGAATTGATGATCCATACTGGAGCTACAGGCTTGGAGATCCTGTTCCTGTTGCATTCGACCAC
TTTGTAATGGTTTCAAAGGGCGATTTTGATTTTAAAAATCTCCTAGGGGTTAACTATTCTGCACACAGGATTGTTTGGAA
AACCCTTAAAAATGAAAAAATAGATTTTAAAGTATCAAAGGTTGTAAAAAATCCATTTTATGCGATAGATCTTTTAGAAG
AGGGCTACAGTATGTTTTTAAACACATGTCTGTTAAGATACGTTAAAAAAGATTATTTAATCAAAACTCCAGATTATTAC
GATAAAACAAAACATACTATAAACTTTATTTTAAATAAATCCATCCCTGAAGATGAATTTGAAGAAATATTGTATAAAAA
AGAAAAAGAAATAAAATTGGCGGGTTTTGATCCGCTTTTGTAA

Upstream 100 bases:

>100_bases
AATTTTCCAAAATCTCCGCAGAATTCATAATATCTCCTGATAAATTTAAAATACTTGAGTAAAAGATAATATTATACCAC
AATTGTTAGGGGTTGTTTTC

Downstream 100 bases:

>100_bases
ATTTGAGTTGTCCAATATTATTTTTAAACTTATTTGATAATTATTTTTGAATTTATTTTTCCAACAATTGGCGAAACAAA
GTATGCGGTGGGAAACGCTA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNKLSESDLSVTLNINYRGKQITKTQVEILKSVSETRSQNRTAEILGIPPSTVNIQIKRLENKLDLKLTFSSPAGTMLSP
DAERIVSYYNAYLERTSKEKFIACGFISGEVGRILFDDVLVSSFSNVLRLHRSNLTSVVGIDDPYWSYRLGDPVPVAFDH
FVMVSKGDFDFKNLLGVNYSAHRIVWKTLKNEKIDFKVSKVVKNPFYAIDLLEEGYSMFLNTCLLRYVKKDYLIKTPDYY
DKTKHTINFILNKSIPEDEFEEILYKKEKEIKLAGFDPLL

Sequences:

>Translated_280_residues
MNKLSESDLSVTLNINYRGKQITKTQVEILKSVSETRSQNRTAEILGIPPSTVNIQIKRLENKLDLKLTFSSPAGTMLSP
DAERIVSYYNAYLERTSKEKFIACGFISGEVGRILFDDVLVSSFSNVLRLHRSNLTSVVGIDDPYWSYRLGDPVPVAFDH
FVMVSKGDFDFKNLLGVNYSAHRIVWKTLKNEKIDFKVSKVVKNPFYAIDLLEEGYSMFLNTCLLRYVKKDYLIKTPDYY
DKTKHTINFILNKSIPEDEFEEILYKKEKEIKLAGFDPLL
>Mature_280_residues
MNKLSESDLSVTLNINYRGKQITKTQVEILKSVSETRSQNRTAEILGIPPSTVNIQIKRLENKLDLKLTFSSPAGTMLSP
DAERIVSYYNAYLERTSKEKFIACGFISGEVGRILFDDVLVSSFSNVLRLHRSNLTSVVGIDDPYWSYRLGDPVPVAFDH
FVMVSKGDFDFKNLLGVNYSAHRIVWKTLKNEKIDFKVSKVVKNPFYAIDLLEEGYSMFLNTCLLRYVKKDYLIKTPDYY
DKTKHTINFILNKSIPEDEFEEILYKKEKEIKLAGFDPLL

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1 [H]

EC number: NA

Molecular weight: Translated: 32196; Mature: 32196

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLSESDLSVTLNINYRGKQITKTQVEILKSVSETRSQNRTAEILGIPPSTVNIQIKRL
CCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEE
ENKLDLKLTFSSPAGTMLSPDAERIVSYYNAYLERTSKEKFIACGFISGEVGRILFDDVL
CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHH
VSSFSNVLRLHRSNLTSVVGIDDPYWSYRLGDPVPVAFDHFVMVSKGDFDFKNLLGVNYS
HHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCEEEEEEEEEECCCCCHHHHHCCCCC
AHRIVWKTLKNEKIDFKVSKVVKNPFYAIDLLEEGYSMFLNTCLLRYVKKDYLIKTPDYY
HHHHHHHHHCCCCCCEEHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCEEECCCCC
DKTKHTINFILNKSIPEDEFEEILYKKEKEIKLAGFDPLL
CCHHHEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCC
>Mature Secondary Structure
MNKLSESDLSVTLNINYRGKQITKTQVEILKSVSETRSQNRTAEILGIPPSTVNIQIKRL
CCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEE
ENKLDLKLTFSSPAGTMLSPDAERIVSYYNAYLERTSKEKFIACGFISGEVGRILFDDVL
CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHH
VSSFSNVLRLHRSNLTSVVGIDDPYWSYRLGDPVPVAFDHFVMVSKGDFDFKNLLGVNYS
HHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCEEEEEEEEEECCCCCHHHHHCCCCC
AHRIVWKTLKNEKIDFKVSKVVKNPFYAIDLLEEGYSMFLNTCLLRYVKKDYLIKTPDYY
HHHHHHHHHCCCCCCEEHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCEEECCCCC
DKTKHTINFILNKSIPEDEFEEILYKKEKEIKLAGFDPLL
CCHHHEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]