Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523328

Identifier: 42523328

GI number: 42523328

Start: 1772673

End: 1773770

Strand: Direct

Name: 42523328

Synonym: Bd1843

Alternate gene names: NA

Gene position: 1772673-1773770 (Clockwise)

Preceding gene: 42523327

Following gene: 42523329

Centisome position: 46.86

GC content: 48.82

Gene sequence:

>1098_bases
ATGCCTCAACGTTTCATTTTCGAATCATCCATTTTAGACTCCGTTGTCGGAGGACATTCAGCCATCGATATCCCCAGGCT
GAATATTCATACCCTCGAGGCTGCCAGTTCCTTCCTTTTAAGCTATGGCTTTGATATCACCCGCGAAGACGAACTGGAAA
GACTGTGGTATTTCCACCGTCGCGCTTTGGTGTTGATGCTGGAAAAACTGGGTTTTCAGGACACGGACCTGCCTGAAGTT
TTCCGTGACCGTAAAAAACTGGGCGACATCCGCCAACTTCTGATTTTTGCCAGCTCCCAGAATCCGCAAGAACAACAGCT
GCAGCGCTGGGCTTGTGCGATCATCCGCTGTATGCACGTCTTTGTGCATGCGGAAAATGATCTGTTCAGTTCGTTCTCGG
AAGAAATTCAGTCCCAAATCCTGACCCCGTTCCAGAACTGCATTTTGCATGACGGAAACACCCATCGCACCTTTATGAAA
AGCCCGACTGACCAGTTGGATCAGGTCGAACTGATGGGCTTTGAAGTAAAGCCCTTCAAAACGTCTTCCAGCACCGTGAT
CAAGCTTCTGGCGAAACCCGATGCCTTGGCGATGAAGATCTTTGACAAGCTGGGTGTGCGCTTTGTGACCCGCAATCTGT
TTGATTCCTTCCAGGTCGTGCGCTTCCTGATCAAAGAGGACATCATCAGCTTCCCGCACATCATGCCGGATCAAAGCTCC
AACAATCTTTATCCGGTGAATTTATTCATGAGTGTTTGTGATGATCTATCCCATCGTCTGGACACCTTGGATGAAAAAAG
CATCCAAGAGGCCTTTGATCAGAAGCTGCTTGAGGAAGGCGACAACGCCAAGTTCCTGCGCAAAGAGAATTTCTTTTCGG
GGCAGGATTATAAATTTATCAAATTCATTTCCCGTAAGCTGATCCATATCAAACCCCAGGGCGGCAAAGAGGCTTTCAGC
TTCTTCTATCCCTTTGAGGTTCAGATCATGGACAAGTCCGCTCACGACCGTATTTTGTCCGGTCCCAGCGAACATCAGGC
TTACAAGGAACGTCAACGAACGGCCGCCAGAAAGCGTCTGTTTCCGGATCCAGGTTAA

Upstream 100 bases:

>100_bases
AACCAGCGGGACCCTGGGCACCTTCCGCTTGCATGCCTGCTCCTTGATCAAATAAGCGCCGCGTCTTGCTTCACCCCCTA
TCGAGTTTGAAGATAGGGGA

Downstream 100 bases:

>100_bases
TTATGTTTTTAAAACTTCTTTCTTATCCTCGTTCTTTGCTGGGTGCGCTTCTGCTGCCGATTCACACGGTGCTGTGTTCT
GCGGCGATGGTCATCTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MPQRFIFESSILDSVVGGHSAIDIPRLNIHTLEAASSFLLSYGFDITREDELERLWYFHRRALVLMLEKLGFQDTDLPEV
FRDRKKLGDIRQLLIFASSQNPQEQQLQRWACAIIRCMHVFVHAENDLFSSFSEEIQSQILTPFQNCILHDGNTHRTFMK
SPTDQLDQVELMGFEVKPFKTSSSTVIKLLAKPDALAMKIFDKLGVRFVTRNLFDSFQVVRFLIKEDIISFPHIMPDQSS
NNLYPVNLFMSVCDDLSHRLDTLDEKSIQEAFDQKLLEEGDNAKFLRKENFFSGQDYKFIKFISRKLIHIKPQGGKEAFS
FFYPFEVQIMDKSAHDRILSGPSEHQAYKERQRTAARKRLFPDPG

Sequences:

>Translated_365_residues
MPQRFIFESSILDSVVGGHSAIDIPRLNIHTLEAASSFLLSYGFDITREDELERLWYFHRRALVLMLEKLGFQDTDLPEV
FRDRKKLGDIRQLLIFASSQNPQEQQLQRWACAIIRCMHVFVHAENDLFSSFSEEIQSQILTPFQNCILHDGNTHRTFMK
SPTDQLDQVELMGFEVKPFKTSSSTVIKLLAKPDALAMKIFDKLGVRFVTRNLFDSFQVVRFLIKEDIISFPHIMPDQSS
NNLYPVNLFMSVCDDLSHRLDTLDEKSIQEAFDQKLLEEGDNAKFLRKENFFSGQDYKFIKFISRKLIHIKPQGGKEAFS
FFYPFEVQIMDKSAHDRILSGPSEHQAYKERQRTAARKRLFPDPG
>Mature_364_residues
PQRFIFESSILDSVVGGHSAIDIPRLNIHTLEAASSFLLSYGFDITREDELERLWYFHRRALVLMLEKLGFQDTDLPEVF
RDRKKLGDIRQLLIFASSQNPQEQQLQRWACAIIRCMHVFVHAENDLFSSFSEEIQSQILTPFQNCILHDGNTHRTFMKS
PTDQLDQVELMGFEVKPFKTSSSTVIKLLAKPDALAMKIFDKLGVRFVTRNLFDSFQVVRFLIKEDIISFPHIMPDQSSN
NLYPVNLFMSVCDDLSHRLDTLDEKSIQEAFDQKLLEEGDNAKFLRKENFFSGQDYKFIKFISRKLIHIKPQGGKEAFSF
FYPFEVQIMDKSAHDRILSGPSEHQAYKERQRTAARKRLFPDPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42443; Mature: 42312

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQRFIFESSILDSVVGGHSAIDIPRLNIHTLEAASSFLLSYGFDITREDELERLWYFHR
CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RALVLMLEKLGFQDTDLPEVFRDRKKLGDIRQLLIFASSQNPQEQQLQRWACAIIRCMHV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
FVHAENDLFSSFSEEIQSQILTPFQNCILHDGNTHRTFMKSPTDQLDQVELMGFEVKPFK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHCEEECCCC
TSSSTVIKLLAKPDALAMKIFDKLGVRFVTRNLFDSFQVVRFLIKEDIISFPHIMPDQSS
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NNLYPVNLFMSVCDDLSHRLDTLDEKSIQEAFDQKLLEEGDNAKFLRKENFFSGQDYKFI
CCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHH
KFISRKLIHIKPQGGKEAFSFFYPFEVQIMDKSAHDRILSGPSEHQAYKERQRTAARKRL
HHHHHHHEEECCCCCHHHHHEECCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHCC
FPDPG
CCCCC
>Mature Secondary Structure 
PQRFIFESSILDSVVGGHSAIDIPRLNIHTLEAASSFLLSYGFDITREDELERLWYFHR
CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RALVLMLEKLGFQDTDLPEVFRDRKKLGDIRQLLIFASSQNPQEQQLQRWACAIIRCMHV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
FVHAENDLFSSFSEEIQSQILTPFQNCILHDGNTHRTFMKSPTDQLDQVELMGFEVKPFK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHCEEECCCC
TSSSTVIKLLAKPDALAMKIFDKLGVRFVTRNLFDSFQVVRFLIKEDIISFPHIMPDQSS
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NNLYPVNLFMSVCDDLSHRLDTLDEKSIQEAFDQKLLEEGDNAKFLRKENFFSGQDYKFI
CCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHH
KFISRKLIHIKPQGGKEAFSFFYPFEVQIMDKSAHDRILSGPSEHQAYKERQRTAARKRL
HHHHHHHEEECCCCCHHHHHEECCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHCC
FPDPG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA