| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523328
Identifier: 42523328
GI number: 42523328
Start: 1772673
End: 1773770
Strand: Direct
Name: 42523328
Synonym: Bd1843
Alternate gene names: NA
Gene position: 1772673-1773770 (Clockwise)
Preceding gene: 42523327
Following gene: 42523329
Centisome position: 46.86
GC content: 48.82
Gene sequence:
>1098_bases ATGCCTCAACGTTTCATTTTCGAATCATCCATTTTAGACTCCGTTGTCGGAGGACATTCAGCCATCGATATCCCCAGGCT GAATATTCATACCCTCGAGGCTGCCAGTTCCTTCCTTTTAAGCTATGGCTTTGATATCACCCGCGAAGACGAACTGGAAA GACTGTGGTATTTCCACCGTCGCGCTTTGGTGTTGATGCTGGAAAAACTGGGTTTTCAGGACACGGACCTGCCTGAAGTT TTCCGTGACCGTAAAAAACTGGGCGACATCCGCCAACTTCTGATTTTTGCCAGCTCCCAGAATCCGCAAGAACAACAGCT GCAGCGCTGGGCTTGTGCGATCATCCGCTGTATGCACGTCTTTGTGCATGCGGAAAATGATCTGTTCAGTTCGTTCTCGG AAGAAATTCAGTCCCAAATCCTGACCCCGTTCCAGAACTGCATTTTGCATGACGGAAACACCCATCGCACCTTTATGAAA AGCCCGACTGACCAGTTGGATCAGGTCGAACTGATGGGCTTTGAAGTAAAGCCCTTCAAAACGTCTTCCAGCACCGTGAT CAAGCTTCTGGCGAAACCCGATGCCTTGGCGATGAAGATCTTTGACAAGCTGGGTGTGCGCTTTGTGACCCGCAATCTGT TTGATTCCTTCCAGGTCGTGCGCTTCCTGATCAAAGAGGACATCATCAGCTTCCCGCACATCATGCCGGATCAAAGCTCC AACAATCTTTATCCGGTGAATTTATTCATGAGTGTTTGTGATGATCTATCCCATCGTCTGGACACCTTGGATGAAAAAAG CATCCAAGAGGCCTTTGATCAGAAGCTGCTTGAGGAAGGCGACAACGCCAAGTTCCTGCGCAAAGAGAATTTCTTTTCGG GGCAGGATTATAAATTTATCAAATTCATTTCCCGTAAGCTGATCCATATCAAACCCCAGGGCGGCAAAGAGGCTTTCAGC TTCTTCTATCCCTTTGAGGTTCAGATCATGGACAAGTCCGCTCACGACCGTATTTTGTCCGGTCCCAGCGAACATCAGGC TTACAAGGAACGTCAACGAACGGCCGCCAGAAAGCGTCTGTTTCCGGATCCAGGTTAA
Upstream 100 bases:
>100_bases AACCAGCGGGACCCTGGGCACCTTCCGCTTGCATGCCTGCTCCTTGATCAAATAAGCGCCGCGTCTTGCTTCACCCCCTA TCGAGTTTGAAGATAGGGGA
Downstream 100 bases:
>100_bases TTATGTTTTTAAAACTTCTTTCTTATCCTCGTTCTTTGCTGGGTGCGCTTCTGCTGCCGATTCACACGGTGCTGTGTTCT GCGGCGATGGTCATCTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MPQRFIFESSILDSVVGGHSAIDIPRLNIHTLEAASSFLLSYGFDITREDELERLWYFHRRALVLMLEKLGFQDTDLPEV FRDRKKLGDIRQLLIFASSQNPQEQQLQRWACAIIRCMHVFVHAENDLFSSFSEEIQSQILTPFQNCILHDGNTHRTFMK SPTDQLDQVELMGFEVKPFKTSSSTVIKLLAKPDALAMKIFDKLGVRFVTRNLFDSFQVVRFLIKEDIISFPHIMPDQSS NNLYPVNLFMSVCDDLSHRLDTLDEKSIQEAFDQKLLEEGDNAKFLRKENFFSGQDYKFIKFISRKLIHIKPQGGKEAFS FFYPFEVQIMDKSAHDRILSGPSEHQAYKERQRTAARKRLFPDPG
Sequences:
>Translated_365_residues MPQRFIFESSILDSVVGGHSAIDIPRLNIHTLEAASSFLLSYGFDITREDELERLWYFHRRALVLMLEKLGFQDTDLPEV FRDRKKLGDIRQLLIFASSQNPQEQQLQRWACAIIRCMHVFVHAENDLFSSFSEEIQSQILTPFQNCILHDGNTHRTFMK SPTDQLDQVELMGFEVKPFKTSSSTVIKLLAKPDALAMKIFDKLGVRFVTRNLFDSFQVVRFLIKEDIISFPHIMPDQSS NNLYPVNLFMSVCDDLSHRLDTLDEKSIQEAFDQKLLEEGDNAKFLRKENFFSGQDYKFIKFISRKLIHIKPQGGKEAFS FFYPFEVQIMDKSAHDRILSGPSEHQAYKERQRTAARKRLFPDPG >Mature_364_residues PQRFIFESSILDSVVGGHSAIDIPRLNIHTLEAASSFLLSYGFDITREDELERLWYFHRRALVLMLEKLGFQDTDLPEVF RDRKKLGDIRQLLIFASSQNPQEQQLQRWACAIIRCMHVFVHAENDLFSSFSEEIQSQILTPFQNCILHDGNTHRTFMKS PTDQLDQVELMGFEVKPFKTSSSTVIKLLAKPDALAMKIFDKLGVRFVTRNLFDSFQVVRFLIKEDIISFPHIMPDQSSN NLYPVNLFMSVCDDLSHRLDTLDEKSIQEAFDQKLLEEGDNAKFLRKENFFSGQDYKFIKFISRKLIHIKPQGGKEAFSF FYPFEVQIMDKSAHDRILSGPSEHQAYKERQRTAARKRLFPDPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42443; Mature: 42312
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQRFIFESSILDSVVGGHSAIDIPRLNIHTLEAASSFLLSYGFDITREDELERLWYFHR CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RALVLMLEKLGFQDTDLPEVFRDRKKLGDIRQLLIFASSQNPQEQQLQRWACAIIRCMHV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FVHAENDLFSSFSEEIQSQILTPFQNCILHDGNTHRTFMKSPTDQLDQVELMGFEVKPFK HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHCEEECCCC TSSSTVIKLLAKPDALAMKIFDKLGVRFVTRNLFDSFQVVRFLIKEDIISFPHIMPDQSS CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NNLYPVNLFMSVCDDLSHRLDTLDEKSIQEAFDQKLLEEGDNAKFLRKENFFSGQDYKFI CCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHH KFISRKLIHIKPQGGKEAFSFFYPFEVQIMDKSAHDRILSGPSEHQAYKERQRTAARKRL HHHHHHHEEECCCCCHHHHHEECCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHCC FPDPG CCCCC >Mature Secondary Structure PQRFIFESSILDSVVGGHSAIDIPRLNIHTLEAASSFLLSYGFDITREDELERLWYFHR CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RALVLMLEKLGFQDTDLPEVFRDRKKLGDIRQLLIFASSQNPQEQQLQRWACAIIRCMHV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FVHAENDLFSSFSEEIQSQILTPFQNCILHDGNTHRTFMKSPTDQLDQVELMGFEVKPFK HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHCEEECCCC TSSSTVIKLLAKPDALAMKIFDKLGVRFVTRNLFDSFQVVRFLIKEDIISFPHIMPDQSS CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NNLYPVNLFMSVCDDLSHRLDTLDEKSIQEAFDQKLLEEGDNAKFLRKENFFSGQDYKFI CCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHH KFISRKLIHIKPQGGKEAFSFFYPFEVQIMDKSAHDRILSGPSEHQAYKERQRTAARKRL HHHHHHHEEECCCCCHHHHHEECCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHCC FPDPG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA