Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523326

Identifier: 42523326

GI number: 42523326

Start: 1769031

End: 1771721

Strand: Direct

Name: 42523326

Synonym: Bd1841

Alternate gene names: NA

Gene position: 1769031-1771721 (Clockwise)

Preceding gene: 42523321

Following gene: 42523327

Centisome position: 46.76

GC content: 51.39

Gene sequence:

>2691_bases
ATGGCATTTAATAAAAACATCCTGGTTGTGGGGGCATTGCTTTCTTCGACACTTCTTTCCGCCTGCACCCAGTTTGAGGC
TAAGCCTCTGGATAAAATCATCCAGGCGAAACAGGCACCGGCAAACTCCCTGAGTTCTTTCAGCACTCCCGCCGAAATTC
CTGCAAATGCCGCTTGTAAGCAGGCGTCCTGCATTACCATTCAAAAGGCTTCTTTGGGGAAGATCTTCCTGCTGATGGCT
TCGGGTATCACGTCCGGGATGACGCCGCAGTGGTATGATCTGAAACCTCTGGTGGTGAGCTTTGAAAAATCCGGCAACCG
CCTGGCTTTGATCGGTGAAAATTACAACAGCATCTATTCTGAAATCCGCACCGTGAATCTGATCCAGAGTTTCGAAGTGA
TTTCTGAAGACGCAACGTCCATCACGTTTGACTGGGGACAGGGTCTAAAAAGTTTTGTCCTTCAGCGTTCCTATGATGTT
GATGCACCTCGTGGCAATGTGGATTTGACCGACAGCTCTTTGGCCTCCATTCCGGTGATTGATTCTTTTGTGACCGGAAT
CAAGTTTGATGAAAAAAACATTGAACTGAATCAGCTTTCAAAAATCCGCAGTGATGTGGTGAAGGCGGGTTCTGACAAGT
CCCTGAATCATGAGCCGCGGGAAGAGACGCTGAACATGAACATTCAGATCCGTGCGTATGATCTGTCTAAGAACTTCAAG
GCCAAAGAATACGACAGCTCCCGCCGTGTGGGTTTCTTCGTCACGAAGTATCGTAAGCTTGGCTACAGCAAGGAAATGAC
GAATCTGATCACCAAGTGGGATATTTCCCCAGAAAAGGGCCCAATCAAGGTGCGGGTTTCCGAGGCTGTTCCAGAGGACT
ATCTGGCGGCGGTGACCGAAGGGGCTCTTTATTGGAATAAAGTCTTTGGCCGTGATGTGATCCAAGTTGTGACCGGTGTT
TCTGTGGATGCCAAACCTGAAGATCGCAGTATCATCGTGCGCTGGATCCCGTGGCTGGACTCCGGGGCGGCTTACGCCAT
CGGTCAGTCCGATCCGTTGACGGGCGAACTTTTGCGCGCTCAGGTGTTCATGCCGTCCGTATTCACGTCTGTCGGTTCTG
CGGATCTGGTAAAACTTAACGGGGATGTTCCTGTCGTCGCTGCAGGTGCGATTGCCTGTGACCTCACCGAGTCTTTGCTG
GCTCTGAACAAGATCGCCCGCGAGGCCGGCGACTCTCAACGTCTTAGACTGGCTCAGGACAGCGTGCGTGCCACTGTGGC
GCATGAGTTGGGGCATGCCTTGGGTATGCGCCACAACTTTGCAGGGTCCTCTTCTGCGAAGGTTTCAACTCAGGAAATTT
ACGATTCTGCTAAAACGTACTTGCGTGATCCAAATCATCAGGGGCTGGAAACTTCCACCAGTATCATGGATTATGTCAGC
GGTATCGATGACATTCTGATGTCCGGTCGTATTAAATATTCTGCGCTTTCCTATGACAAGATGGCGATGGACTGGGCTTA
TTCCGAAAACGACACGGCTTTGGATGAAAAAATCAGCCGCTACTGCACGGATGATGATATCGCTGTGGCGAATTCTCAAG
GGTTGCAGATCTATGGTTGTGAGCGTTTTGATGCGGGCAACAACCCCTTGCTGCGCAAATACCTGGATGCGGTGGATGAA
CGTGATGACCTGGTGAAGGTTCTGTTTGCCTCCATCATTGGTCGTTTGTACCCAGCCGATCAGCCGGGTGTGGTTCGCAA
TCTGGATGCGGTTTTGGCGGACACAGTCAAATGGGGCCGTGCGAATATTGATCTGACTTTTGTTTCCCAGGTTCTGTTTG
ACAGCACCAAGAATGGACAGCCGGCAGCAAGCTTTGCATCTTTGACGGCGGTAAAAACCGGCAAGATCATGTATGCGCGT
CTGGGACTGGATGAGCAGTTGATGAAAGAACGTGCCGCCTCCTTGAAGGAAGTCGGCGGTTATGCGGCTTTGTTGAACGG
TTTGATGCGCGATAGTAAAGGCAACATCAACACGAAGTGGCTGGATCAACAGATTGAAGAGCTGAAAGCGGCTCCGTACC
TGGCTCAAGGTAAAACTTTGGGTGGTCGTGAGTATGTTCTGACGGAAGCTCAGCAAAGAAAGATCCTGAAGTTCATGGAC
AGCATCCGTCCGGTGAATGACAAGGTTTTGCTGGCTGGTGGTGCGACCTTGTTACCGAAACTGAACGAAGCCGTGGAAGA
GGCCAATGGTGCTAAAGCCATCGTGACGTCCTTGCTGGGTCAGAATTTGTTGGATGAATCCGAAGCAGAGTCCCTGACGG
CCTTGTATCTGGATCTGGCTCAGGCGGCGACGGGGACTGTGGTTGTGAAAGTGGGCCCGGGTCTTACCAAAGAAGTGACA
TTGCCATACTCCTGGTTGAAGGCGGATGAAAAGGCTTACTTCGGGAAGCTGTTGTCTTCTCAAGGTCTGCGCTTTGATAT
GACTTTGCGTGTGGCGAAGGCCCGCTCTGAACAGCTGAAAAAAATCGCCGGCTTGTTGGCTGAGATTGATCCCTCTTTGG
ATCCGGTGACCGAGCCCAATCTGACCACGTTGCCTCAGCGTCTTTTGACGGGCGGTTTGGTGGATGCGGCAGCGGCGGCT
TGGTTGAAAGCTGAGATCGAAGTTCTGGCGGCTTTAAGCAAGATACAATAG

Upstream 100 bases:

>100_bases
CATTGCAATTATCTTTTTTTCAGAACTCTTTTGATCTTCGCAAGACTTTGGCATAAATGCACTGAAATTACTGCAGCTGA
AATCACAGAGGGGACCATTC

Downstream 100 bases:

>100_bases
TAGTTATAGAGAGAGTGAGTTTGATGAAAAGGCCGGCTTTGTACCGGCCTTTTTTATTTGTCTCAAAGCGAGACGGGCAT
CGGGGACTGTCGAAAGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 896; Mature: 895

Protein sequence:

>896_residues
MAFNKNILVVGALLSSTLLSACTQFEAKPLDKIIQAKQAPANSLSSFSTPAEIPANAACKQASCITIQKASLGKIFLLMA
SGITSGMTPQWYDLKPLVVSFEKSGNRLALIGENYNSIYSEIRTVNLIQSFEVISEDATSITFDWGQGLKSFVLQRSYDV
DAPRGNVDLTDSSLASIPVIDSFVTGIKFDEKNIELNQLSKIRSDVVKAGSDKSLNHEPREETLNMNIQIRAYDLSKNFK
AKEYDSSRRVGFFVTKYRKLGYSKEMTNLITKWDISPEKGPIKVRVSEAVPEDYLAAVTEGALYWNKVFGRDVIQVVTGV
SVDAKPEDRSIIVRWIPWLDSGAAYAIGQSDPLTGELLRAQVFMPSVFTSVGSADLVKLNGDVPVVAAGAIACDLTESLL
ALNKIAREAGDSQRLRLAQDSVRATVAHELGHALGMRHNFAGSSSAKVSTQEIYDSAKTYLRDPNHQGLETSTSIMDYVS
GIDDILMSGRIKYSALSYDKMAMDWAYSENDTALDEKISRYCTDDDIAVANSQGLQIYGCERFDAGNNPLLRKYLDAVDE
RDDLVKVLFASIIGRLYPADQPGVVRNLDAVLADTVKWGRANIDLTFVSQVLFDSTKNGQPAASFASLTAVKTGKIMYAR
LGLDEQLMKERAASLKEVGGYAALLNGLMRDSKGNINTKWLDQQIEELKAAPYLAQGKTLGGREYVLTEAQQRKILKFMD
SIRPVNDKVLLAGGATLLPKLNEAVEEANGAKAIVTSLLGQNLLDESEAESLTALYLDLAQAATGTVVVKVGPGLTKEVT
LPYSWLKADEKAYFGKLLSSQGLRFDMTLRVAKARSEQLKKIAGLLAEIDPSLDPVTEPNLTTLPQRLLTGGLVDAAAAA
WLKAEIEVLAALSKIQ

Sequences:

>Translated_896_residues
MAFNKNILVVGALLSSTLLSACTQFEAKPLDKIIQAKQAPANSLSSFSTPAEIPANAACKQASCITIQKASLGKIFLLMA
SGITSGMTPQWYDLKPLVVSFEKSGNRLALIGENYNSIYSEIRTVNLIQSFEVISEDATSITFDWGQGLKSFVLQRSYDV
DAPRGNVDLTDSSLASIPVIDSFVTGIKFDEKNIELNQLSKIRSDVVKAGSDKSLNHEPREETLNMNIQIRAYDLSKNFK
AKEYDSSRRVGFFVTKYRKLGYSKEMTNLITKWDISPEKGPIKVRVSEAVPEDYLAAVTEGALYWNKVFGRDVIQVVTGV
SVDAKPEDRSIIVRWIPWLDSGAAYAIGQSDPLTGELLRAQVFMPSVFTSVGSADLVKLNGDVPVVAAGAIACDLTESLL
ALNKIAREAGDSQRLRLAQDSVRATVAHELGHALGMRHNFAGSSSAKVSTQEIYDSAKTYLRDPNHQGLETSTSIMDYVS
GIDDILMSGRIKYSALSYDKMAMDWAYSENDTALDEKISRYCTDDDIAVANSQGLQIYGCERFDAGNNPLLRKYLDAVDE
RDDLVKVLFASIIGRLYPADQPGVVRNLDAVLADTVKWGRANIDLTFVSQVLFDSTKNGQPAASFASLTAVKTGKIMYAR
LGLDEQLMKERAASLKEVGGYAALLNGLMRDSKGNINTKWLDQQIEELKAAPYLAQGKTLGGREYVLTEAQQRKILKFMD
SIRPVNDKVLLAGGATLLPKLNEAVEEANGAKAIVTSLLGQNLLDESEAESLTALYLDLAQAATGTVVVKVGPGLTKEVT
LPYSWLKADEKAYFGKLLSSQGLRFDMTLRVAKARSEQLKKIAGLLAEIDPSLDPVTEPNLTTLPQRLLTGGLVDAAAAA
WLKAEIEVLAALSKIQ
>Mature_895_residues
AFNKNILVVGALLSSTLLSACTQFEAKPLDKIIQAKQAPANSLSSFSTPAEIPANAACKQASCITIQKASLGKIFLLMAS
GITSGMTPQWYDLKPLVVSFEKSGNRLALIGENYNSIYSEIRTVNLIQSFEVISEDATSITFDWGQGLKSFVLQRSYDVD
APRGNVDLTDSSLASIPVIDSFVTGIKFDEKNIELNQLSKIRSDVVKAGSDKSLNHEPREETLNMNIQIRAYDLSKNFKA
KEYDSSRRVGFFVTKYRKLGYSKEMTNLITKWDISPEKGPIKVRVSEAVPEDYLAAVTEGALYWNKVFGRDVIQVVTGVS
VDAKPEDRSIIVRWIPWLDSGAAYAIGQSDPLTGELLRAQVFMPSVFTSVGSADLVKLNGDVPVVAAGAIACDLTESLLA
LNKIAREAGDSQRLRLAQDSVRATVAHELGHALGMRHNFAGSSSAKVSTQEIYDSAKTYLRDPNHQGLETSTSIMDYVSG
IDDILMSGRIKYSALSYDKMAMDWAYSENDTALDEKISRYCTDDDIAVANSQGLQIYGCERFDAGNNPLLRKYLDAVDER
DDLVKVLFASIIGRLYPADQPGVVRNLDAVLADTVKWGRANIDLTFVSQVLFDSTKNGQPAASFASLTAVKTGKIMYARL
GLDEQLMKERAASLKEVGGYAALLNGLMRDSKGNINTKWLDQQIEELKAAPYLAQGKTLGGREYVLTEAQQRKILKFMDS
IRPVNDKVLLAGGATLLPKLNEAVEEANGAKAIVTSLLGQNLLDESEAESLTALYLDLAQAATGTVVVKVGPGLTKEVTL
PYSWLKADEKAYFGKLLSSQGLRFDMTLRVAKARSEQLKKIAGLLAEIDPSLDPVTEPNLTTLPQRLLTGGLVDAAAAAW
LKAEIEVLAALSKIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97649; Mature: 97518

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNKNILVVGALLSSTLLSACTQFEAKPLDKIIQAKQAPANSLSSFSTPAEIPANAACK
CCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHC
QASCITIQKASLGKIFLLMASGITSGMTPQWYDLKPLVVSFEKSGNRLALIGENYNSIYS
CCCEEEEECCCCCCEEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHH
EIRTVNLIQSFEVISEDATSITFDWGQGLKSFVLQRSYDVDAPRGNVDLTDSSLASIPVI
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
DSFVTGIKFDEKNIELNQLSKIRSDVVKAGSDKSLNHEPREETLNMNIQIRAYDLSKNFK
HHHHHCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCEEEEEEEEECCCCCC
AKEYDSSRRVGFFVTKYRKLGYSKEMTNLITKWDISPEKGPIKVRVSEAVPEDYLAAVTE
CCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHH
GALYWNKVFGRDVIQVVTGVSVDAKPEDRSIIVRWIPWLDSGAAYAIGQSDPLTGELLRA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHHH
QVFMPSVFTSVGSADLVKLNGDVPVVAAGAIACDLTESLLALNKIAREAGDSQRLRLAQD
HHHHHHHHHHCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SVRATVAHELGHALGMRHNFAGSSSAKVSTQEIYDSAKTYLRDPNHQGLETSTSIMDYVS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
GIDDILMSGRIKYSALSYDKMAMDWAYSENDTALDEKISRYCTDDDIAVANSQGLQIYGC
HHHHHHHCCCEEEEEECCHHHHEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEC
ERFDAGNNPLLRKYLDAVDERDDLVKVLFASIIGRLYPADQPGVVRNLDAVLADTVKWGR
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
ANIDLTFVSQVLFDSTKNGQPAASFASLTAVKTGKIMYARLGLDEQLMKERAASLKEVGG
CCEEHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCEEEEECCCCHHHHHHHHHHHHHHCH
YAALLNGLMRDSKGNINTKWLDQQIEELKAAPYLAQGKTLGGREYVLTEAQQRKILKFMD
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHH
SIRPVNDKVLLAGGATLLPKLNEAVEEANGAKAIVTSLLGQNLLDESEAESLTALYLDLA
HCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QAATGTVVVKVGPGLTKEVTLPYSWLKADEKAYFGKLLSSQGLRFDMTLRVAKARSEQLK
HCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
KIAGLLAEIDPSLDPVTEPNLTTLPQRLLTGGLVDAAAAAWLKAEIEVLAALSKIQ
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFNKNILVVGALLSSTLLSACTQFEAKPLDKIIQAKQAPANSLSSFSTPAEIPANAACK
CCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHC
QASCITIQKASLGKIFLLMASGITSGMTPQWYDLKPLVVSFEKSGNRLALIGENYNSIYS
CCCEEEEECCCCCCEEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHH
EIRTVNLIQSFEVISEDATSITFDWGQGLKSFVLQRSYDVDAPRGNVDLTDSSLASIPVI
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
DSFVTGIKFDEKNIELNQLSKIRSDVVKAGSDKSLNHEPREETLNMNIQIRAYDLSKNFK
HHHHHCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCEEEEEEEEECCCCCC
AKEYDSSRRVGFFVTKYRKLGYSKEMTNLITKWDISPEKGPIKVRVSEAVPEDYLAAVTE
CCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHH
GALYWNKVFGRDVIQVVTGVSVDAKPEDRSIIVRWIPWLDSGAAYAIGQSDPLTGELLRA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHHH
QVFMPSVFTSVGSADLVKLNGDVPVVAAGAIACDLTESLLALNKIAREAGDSQRLRLAQD
HHHHHHHHHHCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SVRATVAHELGHALGMRHNFAGSSSAKVSTQEIYDSAKTYLRDPNHQGLETSTSIMDYVS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
GIDDILMSGRIKYSALSYDKMAMDWAYSENDTALDEKISRYCTDDDIAVANSQGLQIYGC
HHHHHHHCCCEEEEEECCHHHHEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEC
ERFDAGNNPLLRKYLDAVDERDDLVKVLFASIIGRLYPADQPGVVRNLDAVLADTVKWGR
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
ANIDLTFVSQVLFDSTKNGQPAASFASLTAVKTGKIMYARLGLDEQLMKERAASLKEVGG
CCEEHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCEEEEECCCCHHHHHHHHHHHHHHCH
YAALLNGLMRDSKGNINTKWLDQQIEELKAAPYLAQGKTLGGREYVLTEAQQRKILKFMD
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHH
SIRPVNDKVLLAGGATLLPKLNEAVEEANGAKAIVTSLLGQNLLDESEAESLTALYLDLA
HCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QAATGTVVVKVGPGLTKEVTLPYSWLKADEKAYFGKLLSSQGLRFDMTLRVAKARSEQLK
HCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
KIAGLLAEIDPSLDPVTEPNLTTLPQRLLTGGLVDAAAAAWLKAEIEVLAALSKIQ
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA