| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523255
Identifier: 42523255
GI number: 42523255
Start: 1700023
End: 1700511
Strand: Direct
Name: 42523255
Synonym: Bd1765
Alternate gene names: NA
Gene position: 1700023-1700511 (Clockwise)
Preceding gene: 42523253
Following gene: 42523256
Centisome position: 44.94
GC content: 50.51
Gene sequence:
>489_bases GTGCTTAAAAAAGTGGCGTTGGCGCTATGCCTGGTAACAGTTATTTTTGCAGCTCAAGGGGAGGCCAAAGAGTTGACCAA TCGTTTGGGTGTGGGTGTGAAAAGCCACTCTGCTCTGGATCTGGCTCAGTTGGCTGCAGTTTATTATATTGCTCCGGATG TTTCCATCTCTGGTGGTTTGGGTATTGACACTCAGGAAGACTATTCCAAGTTTGCCTTCAACGCCGGCATCCGCCGCATC GTTTTCAAAGAAGACAACATGAACTTCTACATGGGTGGTACTTTGGGTATCCTGAACAACGAAGTGGCTGGCGATAAAGA ATCCGGCTTTGAACTGAACGCGTTGTTCGGTGGTGAGTTCTTCTTCACCGGCCTTGATTCCCTGGCATTCACCTTTGAGG GGGGCGTGGGTGTGATCTCTGGCGACAACGTGCGCTTCAGAACCATCGGCGACGGCCCTTTCAGCGCGGGAATCATCTTC TACTTCTAA
Upstream 100 bases:
>100_bases ACCCCTTTGACACTGTCCGTAAGATGGAAAAACCTTTGCGCCCCTTCATCCTTTTGCCTTTAATAAGAGGGCTAAAAAAT TCGATCACAAGGAGATCAAA
Downstream 100 bases:
>100_bases TCCTCAAACAAATTTCCAATCTCCAAAAAGGATATTTATGAAAAAAGTTATTCACACAGACAATGCGCCGAAAGCGGTGG GTCCTTATTCTCAGGCAATT
Product: putative organic solvent tolerance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MLKKVALALCLVTVIFAAQGEAKELTNRLGVGVKSHSALDLAQLAAVYYIAPDVSISGGLGIDTQEDYSKFAFNAGIRRI VFKEDNMNFYMGGTLGILNNEVAGDKESGFELNALFGGEFFFTGLDSLAFTFEGGVGVISGDNVRFRTIGDGPFSAGIIF YF
Sequences:
>Translated_162_residues MLKKVALALCLVTVIFAAQGEAKELTNRLGVGVKSHSALDLAQLAAVYYIAPDVSISGGLGIDTQEDYSKFAFNAGIRRI VFKEDNMNFYMGGTLGILNNEVAGDKESGFELNALFGGEFFFTGLDSLAFTFEGGVGVISGDNVRFRTIGDGPFSAGIIF YF >Mature_162_residues MLKKVALALCLVTVIFAAQGEAKELTNRLGVGVKSHSALDLAQLAAVYYIAPDVSISGGLGIDTQEDYSKFAFNAGIRRI VFKEDNMNFYMGGTLGILNNEVAGDKESGFELNALFGGEFFFTGLDSLAFTFEGGVGVISGDNVRFRTIGDGPFSAGIIF YF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17319; Mature: 17319
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKVALALCLVTVIFAAQGEAKELTNRLGVGVKSHSALDLAQLAAVYYIAPDVSISGGL CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCCEECCCC GIDTQEDYSKFAFNAGIRRIVFKEDNMNFYMGGTLGILNNEVAGDKESGFELNALFGGEF CCCCHHHHHHHHHHCCCEEEEEEECCCEEEECCEEEEECCCCCCCCCCCEEEEEEECCEE FFTGLDSLAFTFEGGVGVISGDNVRFRTIGDGPFSAGIIFYF EEECCCCEEEEECCCEEEEECCCEEEEEECCCCCCCCEEEEC >Mature Secondary Structure MLKKVALALCLVTVIFAAQGEAKELTNRLGVGVKSHSALDLAQLAAVYYIAPDVSISGGL CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCCEECCCC GIDTQEDYSKFAFNAGIRRIVFKEDNMNFYMGGTLGILNNEVAGDKESGFELNALFGGEF CCCCHHHHHHHHHHCCCEEEEEEECCCEEEECCEEEEECCCCCCCCCCCEEEEEEECCEE FFTGLDSLAFTFEGGVGVISGDNVRFRTIGDGPFSAGIIFYF EEECCCCEEEEECCCEEEEECCCEEEEEECCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA