| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is algI [H]
Identifier: 42523167
GI number: 42523167
Start: 1601753
End: 1603165
Strand: Direct
Name: algI [H]
Synonym: Bd1667
Alternate gene names: 42523167
Gene position: 1601753-1603165 (Clockwise)
Preceding gene: 42523166
Following gene: 42523168
Centisome position: 42.34
GC content: 49.82
Gene sequence:
>1413_bases ATGCTTTTTAACTCCTACGCCTTTTTATTCCTGTTCCTGCCGTTCACGTTGCTGGGCTATTACTGGATCACGAAAAAGAA CCTGCAACTATGGTTCTTGTTCCTTTCAAGTGTGTTTTTCTATTGTTACTGGAGCACAGTGTATGTGTTCCTGCTGTTGT TCACGGTGGTTCTGGATTTTTATTTAGCCAAAGCCATATCGATGACGACCTCACAGGCGCGCCGAAAGACCTTCCTGCTG ATTTCGGTGATCGCCAATCTTGGGATTCTTGGATTCTTTAAATACTACAACTTCTTTGCGGACTCTTTGAATGGAGCCCT GCAGGTGACGGGGCTTGCGCCGCCGCTGCCGATTTTGAATCTCGTACTGCCCATTGGTATTTCCTTTTACACGTTCCAGT CCCTGTCTTACGTGATTGACGTTTACCGCAGGACATCCAATGCGCATGCGCACCTATTGGAGTTTGCGGGCTATGTGACT TTGTTCCCGCACCAGATCTCGGGCCCACTGGTTCGTCACAACTATATCGTTCCCCAGCTGGAAGACTCCAAAACCTACTT CTTCAATCCAGAGAACTTCTGGAAGGGGTGTTATTTCTTCGTTTTCGGTCTGGCCAAAAAGATGATGATCGCCGATCGTA TCGCGGCGGTGGTGGATCCGCTGGTGATGAATATGGCCGGGGCTTCTACGGCTGAGGCTTGGATTGCCATGATTGGTTAC ACCATGCAGTTGTATTTTGATTTCAGCGGCTATTCCGACATGGCCGTGGGGTTGGGACTGATGATGAACATTCAGTTCCC GCAGAACTTTAATTCTCCGTACAAGTCGCTTTCAATCACTGAGTTCTGGCAGCGCTGGCACATCACGCTGTCTTCCTGGT TGAAGGATTATCTGTATATCTCCCTGGGGGGAAATCGCGCCGGGGTTTTGAAAACCTACCGCAATCTGTTTTTAACCATG GCCATCGGGGGCCTGTGGCACGGGGCGAACTGGACATATCTGGTCTGGGGTTGCTTCCACGGTGGGATTCTGGCGATTGA AAGACTGTTTAAGGACCGTGGCTGGAAGGGTGTTGGCAACAAATACGTGAAGTGGACTTTCACCTTCTTCCTGGTCTGTG TGGGCTGGGTGTTCTTCCGTGCGCATTCAGTTGATCAGGCGCTGTTCTGGTTGCAGAAGGTGTTTATGTTAAATGGTGAC ATCAACTGGGACATCACGTTGATTCCGCTGAAACACAAGGACCGTTTCTTTGCAGCTTTGGGTGTCGGGATCTTGGTGGC CTTCTTGGCCAAGAACACCTGGGAGCGTGAGTTTAAGCCCACGCTATGGCGAGCGGCTTTGATGGCATTCATGTTCGTGG TGTGTCTGATGTACATGGGTGAGGAATCTCCATTCCTTTACTTCCAATTCTAG
Upstream 100 bases:
>100_bases TTCCTGGTTCTTTTTCGGGCCCATGTTGCGTTAGACGCACTGTGGCCCAAAACGGTGCCAGAACCTTTTTTCTGAGCCAT TTATTGGGTACTGTGTGCCC
Downstream 100 bases:
>100_bases GTGGGGCGTATGAAAAGTAATACTTTGAAAATGATTCTTTTCCTTGCGGCTTTCATCCTCGGACTAATGGCGCTGGTGGC GGGTTTTAACTTTGCTGTGG
Product: alginate o-acetyltransferase AlgI
Products: NA
Alternate protein names: Alginate biosynthesis protein AlgI [H]
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MLFNSYAFLFLFLPFTLLGYYWITKKNLQLWFLFLSSVFFYCYWSTVYVFLLLFTVVLDFYLAKAISMTTSQARRKTFLL ISVIANLGILGFFKYYNFFADSLNGALQVTGLAPPLPILNLVLPIGISFYTFQSLSYVIDVYRRTSNAHAHLLEFAGYVT LFPHQISGPLVRHNYIVPQLEDSKTYFFNPENFWKGCYFFVFGLAKKMMIADRIAAVVDPLVMNMAGASTAEAWIAMIGY TMQLYFDFSGYSDMAVGLGLMMNIQFPQNFNSPYKSLSITEFWQRWHITLSSWLKDYLYISLGGNRAGVLKTYRNLFLTM AIGGLWHGANWTYLVWGCFHGGILAIERLFKDRGWKGVGNKYVKWTFTFFLVCVGWVFFRAHSVDQALFWLQKVFMLNGD INWDITLIPLKHKDRFFAALGVGILVAFLAKNTWEREFKPTLWRAALMAFMFVVCLMYMGEESPFLYFQF
Sequences:
>Translated_470_residues MLFNSYAFLFLFLPFTLLGYYWITKKNLQLWFLFLSSVFFYCYWSTVYVFLLLFTVVLDFYLAKAISMTTSQARRKTFLL ISVIANLGILGFFKYYNFFADSLNGALQVTGLAPPLPILNLVLPIGISFYTFQSLSYVIDVYRRTSNAHAHLLEFAGYVT LFPHQISGPLVRHNYIVPQLEDSKTYFFNPENFWKGCYFFVFGLAKKMMIADRIAAVVDPLVMNMAGASTAEAWIAMIGY TMQLYFDFSGYSDMAVGLGLMMNIQFPQNFNSPYKSLSITEFWQRWHITLSSWLKDYLYISLGGNRAGVLKTYRNLFLTM AIGGLWHGANWTYLVWGCFHGGILAIERLFKDRGWKGVGNKYVKWTFTFFLVCVGWVFFRAHSVDQALFWLQKVFMLNGD INWDITLIPLKHKDRFFAALGVGILVAFLAKNTWEREFKPTLWRAALMAFMFVVCLMYMGEESPFLYFQF >Mature_470_residues MLFNSYAFLFLFLPFTLLGYYWITKKNLQLWFLFLSSVFFYCYWSTVYVFLLLFTVVLDFYLAKAISMTTSQARRKTFLL ISVIANLGILGFFKYYNFFADSLNGALQVTGLAPPLPILNLVLPIGISFYTFQSLSYVIDVYRRTSNAHAHLLEFAGYVT LFPHQISGPLVRHNYIVPQLEDSKTYFFNPENFWKGCYFFVFGLAKKMMIADRIAAVVDPLVMNMAGASTAEAWIAMIGY TMQLYFDFSGYSDMAVGLGLMMNIQFPQNFNSPYKSLSITEFWQRWHITLSSWLKDYLYISLGGNRAGVLKTYRNLFLTM AIGGLWHGANWTYLVWGCFHGGILAIERLFKDRGWKGVGNKYVKWTFTFFLVCVGWVFFRAHSVDQALFWLQKVFMLNGD INWDITLIPLKHKDRFFAALGVGILVAFLAKNTWEREFKPTLWRAALMAFMFVVCLMYMGEESPFLYFQF
Specific function: Together with AlgJ and AlgF, forms an inner membrane complex which probably interacts with the alginate polymerization- transport complex and adds acetyl groups at the O-2 and O-3 positions of polymannuronic acid. Acetylation of alginate is important for
COG id: COG1696
COG function: function code M; Predicted membrane protein involved in D-alanine export
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane-bound acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004299 [H]
Pfam domain/function: PF03062 MBOAT [H]
EC number: NA
Molecular weight: Translated: 54595; Mature: 54595
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFNSYAFLFLFLPFTLLGYYWITKKNLQLWFLFLSSVFFYCYWSTVYVFLLLFTVVLDF CCCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLAKAISMTTSQARRKTFLLISVIANLGILGFFKYYNFFADSLNGALQVTGLAPPLPILN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH LVLPIGISFYTFQSLSYVIDVYRRTSNAHAHLLEFAGYVTLFPHQISGPLVRHNYIVPQL HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHEECCHHCCCCEEECCEECCCC EDSKTYFFNPENFWKGCYFFVFGLAKKMMIADRIAAVVDPLVMNMAGASTAEAWIAMIGY CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHE TMQLYFDFSGYSDMAVGLGLMMNIQFPQNFNSPYKSLSITEFWQRWHITLSSWLKDYLYI EEEEEEEECCCCHHHHHCEEEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHEEE SLGGNRAGVLKTYRNLFLTMAIGGLWHGANWTYLVWGCFHGGILAIERLFKDRGWKGVGN EECCCCHHHHHHHHHHHHHHHHHCEEECCCCEEEEEEHHCCHHHHHHHHHHHCCCCCCCC KYVKWTFTFFLVCVGWVFFRAHSVDQALFWLQKVFMLNGDINWDITLIPLKHKDRFFAAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHH GVGILVAFLAKNTWEREFKPTLWRAALMAFMFVVCLMYMGEESPFLYFQF HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure MLFNSYAFLFLFLPFTLLGYYWITKKNLQLWFLFLSSVFFYCYWSTVYVFLLLFTVVLDF CCCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLAKAISMTTSQARRKTFLLISVIANLGILGFFKYYNFFADSLNGALQVTGLAPPLPILN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH LVLPIGISFYTFQSLSYVIDVYRRTSNAHAHLLEFAGYVTLFPHQISGPLVRHNYIVPQL HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHEECCHHCCCCEEECCEECCCC EDSKTYFFNPENFWKGCYFFVFGLAKKMMIADRIAAVVDPLVMNMAGASTAEAWIAMIGY CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHE TMQLYFDFSGYSDMAVGLGLMMNIQFPQNFNSPYKSLSITEFWQRWHITLSSWLKDYLYI EEEEEEEECCCCHHHHHCEEEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHEEE SLGGNRAGVLKTYRNLFLTMAIGGLWHGANWTYLVWGCFHGGILAIERLFKDRGWKGVGN EECCCCHHHHHHHHHHHHHHHHHCEEECCCCEEEEEEHHCCHHHHHHHHHHHCCCCCCCC KYVKWTFTFFLVCVGWVFFRAHSVDQALFWLQKVFMLNGDINWDITLIPLKHKDRFFAAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHH GVGILVAFLAKNTWEREFKPTLWRAALMAFMFVVCLMYMGEESPFLYFQF HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]