Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523116

Identifier: 42523116

GI number: 42523116

Start: 1543927

End: 1545129

Strand: Direct

Name: 42523116

Synonym: Bd1612

Alternate gene names: NA

Gene position: 1543927-1545129 (Clockwise)

Preceding gene: 42523115

Following gene: 42523118

Centisome position: 40.81

GC content: 49.21

Gene sequence:

>1203_bases
ATGGGCGCAAGCAATCATCATGTGAATCTGCATGTATCGAAATTTGAAGCTCCAGCGAAATTGAAAACGCTGAGCTTCGC
CCTGATCGCGATCGGTCTTTTGACTTTCGTGATCGGTCTTATGAAAAATCAGGACAGATTGTGGACTTCTTATCTGGTGT
CCTATTTCTACTTCTCTTGCCTGGCCTTGAGTGGTTTGTTCTGGATCGTTATCAACAACGTGGCTAAAGCCGGCTGGTCC
GTGTCCATCCGTCGTTATGCTGAAGCAACTACGTCCTTCCTTCCGGCGATTCTAATCGGTGGTTTGGTTCTGTTGGTTGG
TTTCAAGCACCTTTACCCTTGGGCGAACCCAGAGGTGGTGGCTGCAAATCCGGTGATCGCGGCGAAAACCGGCTACCTGA
ACATGGGTGGCTTCGTGATTCGTCTGTTCATCTTTGCGGTCGGCTGCATGATCTTCCGTCATGTGATCGTGGGCAACTCT
TTGAAACAGGACAAGTCCGGTGACGAGTCTTTGACGACGAAGTCTGTGGCTCCGTCTGTTGGTTTCATCGTGTTCTACGC
TTTGATGTTCTCTTTGTTCTGCGTGGATCTGTTGATGTCCTTGCTGCCAACTTGGTATTCCACCATCTTTGGTATCTATG
GCTTCTCTGGTATGTTCCAGGCGGGCATGGCATTCCTGGCGATCGTTATCGTTTTGATGAGACGCTCTGGTTTGGTTAAA
GGTTATGTGACTGAAGAGCACCAGCACGACGTGGTGAAATACCTTAAAGGTTTCTCCATTTTCTGGGCTTACATTGCGTT
CTCTCAGTTCATGTTGATCTGGTACGCTAACATCCCTGAGGAAACTGAGTACTACATCGCGCGTGCTCAAGGCGGCTGGA
TGAGCATCTCCATGGCTCTTCTGATCTTCCGTTTCGTGGTTCCGTTCCTGGCACTTTTGCCTCGTGGAATGAAACGCAAC
GACAACAACGTGTTGTTGATCTCTGTCTTGGTATTGGTAATGCAATACGTGGACATCTACTGGATGGTTTACCCGAACTT
CTTCGACGGTCACGTGACCTTCGGATTCTGGGAAATCGGCATCTTCGCTGGTTTCGCGGGTGCGTTCCTTCTGACAATCA
TGTCCTTCTGGTCTAAGCACTCTTTGGTTCCGTTGAAAGACCCAAGAATGCACGAAGCGCTGAACCACCACGTTGCTTAC
TAA

Upstream 100 bases:

>100_bases
GTGATGGGTCCTTATGCTTCCCACATTCCTCAGCAGTACCGCTGGCAGGTTGTTAACTATATCCGCTTCCTAGAGAAGCA
AGAAGCTAAGTAGGTTGTAA

Downstream 100 bases:

>100_bases
GTAGCACGTGGTCGGCTGACGGAGTGGGGGCCATGGCCCTCAAAACGCTCAGACAGTCCTCGCACAAAGGGAGCCTATCT
TGGCTCCCTTTTTTTATTCT

Product: putative molybdopterin oxidoreductase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MGASNHHVNLHVSKFEAPAKLKTLSFALIAIGLLTFVIGLMKNQDRLWTSYLVSYFYFSCLALSGLFWIVINNVAKAGWS
VSIRRYAEATTSFLPAILIGGLVLLVGFKHLYPWANPEVVAANPVIAAKTGYLNMGGFVIRLFIFAVGCMIFRHVIVGNS
LKQDKSGDESLTTKSVAPSVGFIVFYALMFSLFCVDLLMSLLPTWYSTIFGIYGFSGMFQAGMAFLAIVIVLMRRSGLVK
GYVTEEHQHDVVKYLKGFSIFWAYIAFSQFMLIWYANIPEETEYYIARAQGGWMSISMALLIFRFVVPFLALLPRGMKRN
DNNVLLISVLVLVMQYVDIYWMVYPNFFDGHVTFGFWEIGIFAGFAGAFLLTIMSFWSKHSLVPLKDPRMHEALNHHVAY

Sequences:

>Translated_400_residues
MGASNHHVNLHVSKFEAPAKLKTLSFALIAIGLLTFVIGLMKNQDRLWTSYLVSYFYFSCLALSGLFWIVINNVAKAGWS
VSIRRYAEATTSFLPAILIGGLVLLVGFKHLYPWANPEVVAANPVIAAKTGYLNMGGFVIRLFIFAVGCMIFRHVIVGNS
LKQDKSGDESLTTKSVAPSVGFIVFYALMFSLFCVDLLMSLLPTWYSTIFGIYGFSGMFQAGMAFLAIVIVLMRRSGLVK
GYVTEEHQHDVVKYLKGFSIFWAYIAFSQFMLIWYANIPEETEYYIARAQGGWMSISMALLIFRFVVPFLALLPRGMKRN
DNNVLLISVLVLVMQYVDIYWMVYPNFFDGHVTFGFWEIGIFAGFAGAFLLTIMSFWSKHSLVPLKDPRMHEALNHHVAY
>Mature_399_residues
GASNHHVNLHVSKFEAPAKLKTLSFALIAIGLLTFVIGLMKNQDRLWTSYLVSYFYFSCLALSGLFWIVINNVAKAGWSV
SIRRYAEATTSFLPAILIGGLVLLVGFKHLYPWANPEVVAANPVIAAKTGYLNMGGFVIRLFIFAVGCMIFRHVIVGNSL
KQDKSGDESLTTKSVAPSVGFIVFYALMFSLFCVDLLMSLLPTWYSTIFGIYGFSGMFQAGMAFLAIVIVLMRRSGLVKG
YVTEEHQHDVVKYLKGFSIFWAYIAFSQFMLIWYANIPEETEYYIARAQGGWMSISMALLIFRFVVPFLALLPRGMKRND
NNVLLISVLVLVMQYVDIYWMVYPNFFDGHVTFGFWEIGIFAGFAGAFLLTIMSFWSKHSLVPLKDPRMHEALNHHVAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45119; Mature: 44988

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGASNHHVNLHVSKFEAPAKLKTLSFALIAIGLLTFVIGLMKNQDRLWTSYLVSYFYFSC
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LALSGLFWIVINNVAKAGWSVSIRRYAEATTSFLPAILIGGLVLLVGFKHLYPWANPEVV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
AANPVIAAKTGYLNMGGFVIRLFIFAVGCMIFRHVIVGNSLKQDKSGDESLTTKSVAPSV
ECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHH
GFIVFYALMFSLFCVDLLMSLLPTWYSTIFGIYGFSGMFQAGMAFLAIVIVLMRRSGLVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
GYVTEEHQHDVVKYLKGFSIFWAYIAFSQFMLIWYANIPEETEYYIARAQGGWMSISMAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCHHHHHHHH
LIFRFVVPFLALLPRGMKRNDNNVLLISVLVLVMQYVDIYWMVYPNFFDGHVTFGFWEIG
HHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH
IFAGFAGAFLLTIMSFWSKHSLVPLKDPRMHEALNHHVAY
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
GASNHHVNLHVSKFEAPAKLKTLSFALIAIGLLTFVIGLMKNQDRLWTSYLVSYFYFSC
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LALSGLFWIVINNVAKAGWSVSIRRYAEATTSFLPAILIGGLVLLVGFKHLYPWANPEVV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
AANPVIAAKTGYLNMGGFVIRLFIFAVGCMIFRHVIVGNSLKQDKSGDESLTTKSVAPSV
ECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHH
GFIVFYALMFSLFCVDLLMSLLPTWYSTIFGIYGFSGMFQAGMAFLAIVIVLMRRSGLVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
GYVTEEHQHDVVKYLKGFSIFWAYIAFSQFMLIWYANIPEETEYYIARAQGGWMSISMAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCHHHHHHHH
LIFRFVVPFLALLPRGMKRNDNNVLLISVLVLVMQYVDIYWMVYPNFFDGHVTFGFWEIG
HHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH
IFAGFAGAFLLTIMSFWSKHSLVPLKDPRMHEALNHHVAY
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA