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The map label for this gene is yloC [H]

Identifier: 42523072

GI number: 42523072

Start: 1492601

End: 1493479

Strand: Direct

Name: yloC [H]

Synonym: Bd1567

Alternate gene names: 42523072

Gene position: 1492601-1493479 (Clockwise)

Preceding gene: 42523071

Following gene: 42523073

Centisome position: 39.46

GC content: 48.81

Gene sequence:

>879_bases
ATGAAAAGCATGACTGGGTACGGCACCGCAAGAGTTCAGACTAAAGACGTCACTGTGGAAGTGAGCATCCGTTCCGTGAA
CGGACGTTTCCTGGAGCCACGTTTTCACCTGCCTCGTGAATTTGTTTCTTATGAAGGGGAGTTGAAGAAGATTCTGAGTG
GAACCCTTCATCGTGGCACGGTGGATGTTTTCGTTTCCCGCCGTGTGAAGAACACGGCCAGCAAGGCGCAGATGACCGTG
AACGATGCCTTGGCCAAGAAATACATGTCCGCTTATAAGCATCTTTCCAAAGAGTTGGGCGTGCCCTTTAATGTTCACCT
TGAGGTGGTGGCAAGACTGCCTGAAATCATCAAAGTTGAAGAAACCTATGAGCTTTTCACTGGTGAAGACAAGATTCTGA
AAAAAGCATTCACCGAAGCTTGTTCCAACTGCGACAAGGAACGCGCCCGCGAAGGCAAATCCCTGCAAAAGGATCTGCAA
AAACTGCTGGTGGCTCTGGAAAAACAAGTGAAGATTATCAGTGAGTTGCGTGGCGAAGCCAATGCGCAACTTCAGGACCG
TTACGAGCAAAAAGTTCGTGCGCGCCTTAAAGGCAGTGAAATCGATTCCGCCCGTTTGTCCCAGGAAATCGTGATTCAGC
TGGAAAAAGCCGACATCAACGAAGAGCTGAGCCGTCTTGCGGAACACATCAAGAACTACCGTCAGTTGGTGGGCTCGGTC
ACCGCTGAAGGTAAAAAGCTGGATTTCTATACCCAGGAATTGCTGCGTGAGGTGAATACCATTGGGTCAAAGTCTCAGGT
AGCCAAGATCACTGCGGCTGTGGTAGAAGCAAAAACCCTTATTGAAAGACTTAGAGAACAGGTTCAAAACGTTCAGTAA

Upstream 100 bases:

>100_bases
GTTCGATGGGGCCTCGGGTTTTGCTGAGGTTCGAACCGTGGTCGAGAAATTTCTCAAACCTTGACCCTGATTCGGTGGAA
AGCCGAGAATAGAGGTAATT

Downstream 100 bases:

>100_bases
TTATGAAAACTCGCATGATTATCGTCGCCGCTCCAAGTGGCGCAGGAAAAAGCAGCTTTGTCGAAAGGATCACCCGGGAG
GATTCCCGATTGGTGGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKSMTGYGTARVQTKDVTVEVSIRSVNGRFLEPRFHLPREFVSYEGELKKILSGTLHRGTVDVFVSRRVKNTASKAQMTV
NDALAKKYMSAYKHLSKELGVPFNVHLEVVARLPEIIKVEETYELFTGEDKILKKAFTEACSNCDKERAREGKSLQKDLQ
KLLVALEKQVKIISELRGEANAQLQDRYEQKVRARLKGSEIDSARLSQEIVIQLEKADINEELSRLAEHIKNYRQLVGSV
TAEGKKLDFYTQELLREVNTIGSKSQVAKITAAVVEAKTLIERLREQVQNVQ

Sequences:

>Translated_292_residues
MKSMTGYGTARVQTKDVTVEVSIRSVNGRFLEPRFHLPREFVSYEGELKKILSGTLHRGTVDVFVSRRVKNTASKAQMTV
NDALAKKYMSAYKHLSKELGVPFNVHLEVVARLPEIIKVEETYELFTGEDKILKKAFTEACSNCDKERAREGKSLQKDLQ
KLLVALEKQVKIISELRGEANAQLQDRYEQKVRARLKGSEIDSARLSQEIVIQLEKADINEELSRLAEHIKNYRQLVGSV
TAEGKKLDFYTQELLREVNTIGSKSQVAKITAAVVEAKTLIERLREQVQNVQ
>Mature_292_residues
MKSMTGYGTARVQTKDVTVEVSIRSVNGRFLEPRFHLPREFVSYEGELKKILSGTLHRGTVDVFVSRRVKNTASKAQMTV
NDALAKKYMSAYKHLSKELGVPFNVHLEVVARLPEIIKVEETYELFTGEDKILKKAFTEACSNCDKERAREGKSLQKDLQ
KLLVALEKQVKIISELRGEANAQLQDRYEQKVRARLKGSEIDSARLSQEIVIQLEKADINEELSRLAEHIKNYRQLVGSV
TAEGKKLDFYTQELLREVNTIGSKSQVAKITAAVVEAKTLIERLREQVQNVQ

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=299, Percent_Identity=28.7625418060201, Blast_Score=108, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33151; Mature: 33151

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSMTGYGTARVQTKDVTVEVSIRSVNGRFLEPRFHLPREFVSYEGELKKILSGTLHRGT
CCCCCCCCCEEEEEEEEEEEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCH
VDVFVSRRVKNTASKAQMTVNDALAKKYMSAYKHLSKELGVPFNVHLEVVARLPEIIKVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHH
ETYELFTGEDKILKKAFTEACSNCDKERAREGKSLQKDLQKLLVALEKQVKIISELRGEA
HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NAQLQDRYEQKVRARLKGSEIDSARLSQEIVIQLEKADINEELSRLAEHIKNYRQLVGSV
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TAEGKKLDFYTQELLREVNTIGSKSQVAKITAAVVEAKTLIERLREQVQNVQ
HCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSMTGYGTARVQTKDVTVEVSIRSVNGRFLEPRFHLPREFVSYEGELKKILSGTLHRGT
CCCCCCCCCEEEEEEEEEEEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCH
VDVFVSRRVKNTASKAQMTVNDALAKKYMSAYKHLSKELGVPFNVHLEVVARLPEIIKVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHH
ETYELFTGEDKILKKAFTEACSNCDKERAREGKSLQKDLQKLLVALEKQVKIISELRGEA
HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NAQLQDRYEQKVRARLKGSEIDSARLSQEIVIQLEKADINEELSRLAEHIKNYRQLVGSV
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TAEGKKLDFYTQELLREVNTIGSKSQVAKITAAVVEAKTLIERLREQVQNVQ
HCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]