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The map label for this gene is ykwD [H]

Identifier: 42522916

GI number: 42522916

Start: 1324265

End: 1324816

Strand: Direct

Name: ykwD [H]

Synonym: Bd1398

Alternate gene names: 42522916

Gene position: 1324265-1324816 (Clockwise)

Preceding gene: 42522915

Following gene: 42522917

Centisome position: 35.01

GC content: 58.33

Gene sequence:

>552_bases
ATGACCACACTGGGTATTCGTGTCTCATTTTTGTTCTTGTTTGCTTTGGCGCTGGCGGCCTGTGGGGGCGGCGGTGGTTC
GGGCAGAGTATCGCCTGCCGGGGGTGATTCCAGCGACCAGGAATCCTCTGGAGAAAGCAATGGCTCCGAGTGTGGAACCA
TGGTGGACATGGCCTGCGAAGTCCTTGTGGCGGTCAACCAAGAGCGCACCAGTCGCGGGCTGAATGCGCAGACGGCCCTG
CCAGCCTGTGTGGCCGAAGCCCAGGCCCATGCTGATGACATGGTGGCGCGAAATTTCTTCGCCCATGACAGTCCGACGGA
AAGCACCTCGCAGCGTTTTGCACGGTTCGGTCTGTCGGGAAGTTATTGGGGGGAAAACATCGCCGCCGGGTATTCAACCG
CCGCCCAAGTGATGGCGGGATGGATGAGTTCCACCGGGCATCGCAGTAACATCTTAAGTTCCAACTTTCGCACCATGGGT
GTGGGGATCGCTGCCAATTCACAAGGCATGCTCCACTGGGTTCAATGTTTTTCGGGTAAGTCCGCGCTCTAA

Upstream 100 bases:

>100_bases
TCACCAATTCCACATCCACGCTAAGTTCCCGATTTCAGTCACCTCAGCAGTTTTGATTTATTGGCTCTGTCCTTGCTTTA
AAAACCTGCAGGAGGACGGC

Downstream 100 bases:

>100_bases
ATCTGGAGCCAAAATTTCTGGCACTCTTCTTGAATTGATTCTCTCATGACTTCCGTTATGAAGTCCTCTGGTGGCAAACG
GGCCCCAGTGATATTCCGGG

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTTLGIRVSFLFLFALALAACGGGGGSGRVSPAGGDSSDQESSGESNGSECGTMVDMACEVLVAVNQERTSRGLNAQTAL
PACVAEAQAHADDMVARNFFAHDSPTESTSQRFARFGLSGSYWGENIAAGYSTAAQVMAGWMSSTGHRSNILSSNFRTMG
VGIAANSQGMLHWVQCFSGKSAL

Sequences:

>Translated_183_residues
MTTLGIRVSFLFLFALALAACGGGGGSGRVSPAGGDSSDQESSGESNGSECGTMVDMACEVLVAVNQERTSRGLNAQTAL
PACVAEAQAHADDMVARNFFAHDSPTESTSQRFARFGLSGSYWGENIAAGYSTAAQVMAGWMSSTGHRSNILSSNFRTMG
VGIAANSQGMLHWVQCFSGKSAL
>Mature_182_residues
TTLGIRVSFLFLFALALAACGGGGGSGRVSPAGGDSSDQESSGESNGSECGTMVDMACEVLVAVNQERTSRGLNAQTALP
ACVAEAQAHADDMVARNFFAHDSPTESTSQRFARFGLSGSYWGENIAAGYSTAAQVMAGWMSSTGHRSNILSSNFRTMGV
GIAANSQGMLHWVQCFSGKSAL

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 18919; Mature: 18788

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLGIRVSFLFLFALALAACGGGGGSGRVSPAGGDSSDQESSGESNGSECGTMVDMACE
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
VLVAVNQERTSRGLNAQTALPACVAEAQAHADDMVARNFFAHDSPTESTSQRFARFGLSG
HHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
SYWGENIAAGYSTAAQVMAGWMSSTGHRSNILSSNFRTMGVGIAANSQGMLHWVQCFSGK
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCC
SAL
CCC
>Mature Secondary Structure 
TTLGIRVSFLFLFALALAACGGGGGSGRVSPAGGDSSDQESSGESNGSECGTMVDMACE
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
VLVAVNQERTSRGLNAQTALPACVAEAQAHADDMVARNFFAHDSPTESTSQRFARFGLSG
HHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
SYWGENIAAGYSTAAQVMAGWMSSTGHRSNILSSNFRTMGVGIAANSQGMLHWVQCFSGK
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCC
SAL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]