Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522744

Identifier: 42522744

GI number: 42522744

Start: 1148969

End: 1151083

Strand: Direct

Name: 42522744

Synonym: Bd1210

Alternate gene names: NA

Gene position: 1148969-1151083 (Clockwise)

Preceding gene: 42522743

Following gene: 42522745

Centisome position: 30.37

GC content: 53.1

Gene sequence:

>2115_bases
ATGCGAGTCCTTGTTTTGAACGTTCTATTATCTGGTTTCGCGTTGATTTCCGTGGGTTGCACCCTGGAGGCCAACATCGC
TGGGCAAATGCTGCCTTCACTGTTGCGTCCCGACGGTGGGGAGGGTGTTGTTGATGCCCCTCAAATATCTCAGAAAATTT
GTGCGAATGGACCCGTGTTTTCTCAAGCGGAGATGCCGTCGGGTGAAACGATCTTGGCCGGTGACTTTACTCGCATCGGC
CCCTGCAGCAGTCCTTTCTTAAAATACAATCCAGTCACGGGTGCAGTTGAGTCCATCGGACCTTCCGACGCCGCCGTCGG
AGAAGCTCATGTCATTGAGGCGGATGGGGCTGGAGGTTATTATGTCGGGGGGTACTTTGAGGCCAAGAATGGATCTCAAG
CCTTGATTCATATCAAACCGGACGGGACACTTTCGGATTGGAATCCCCAACTTTCCCGTGGAGCTCTTGCTGCAGGGGTG
AGTGCTCTGAAGGTTCATGATGGAGTTCTTTATGTGGGAGGAGATTTTACGGCAGCGGGCAGCCCTTCGCTGAGCCGGAC
CGCTCTTGCCGCCTTTGATATCGCCACGGGGGATTTGTTGCCTTGGGCGCCACCGCTGACCACGGACAGTTTCGGGGACT
TGCACATTCGTTCAATCGAGATTGCTTCTGGATCCATATTTATCGCAGGGGCTTTTGGAACTGTTGGCGCCAATCTTCAT
GTTTCCGAAGGTGTAGCCAAGATCAATTTGACTGATAATAATGCCGACACTTCTTTTGCCGCCACGGGGTTAAGTTCTCA
ATCCGGAAAAATGAAATGGCATAACGGAACCCTGGTGCTTGTGGATGGTGGAGGACTTGTGATGCTGAACTCCACCAACG
GTGCCAACACGGGGTTTGTCGCGGGACTGACGGCGGTGCCGGCTTGGGGAGGCTTCTCGGACTATGAGCTGAAGGGCGAT
GAGCTTTGGATTGCCGGAATGTTTGATGCCGTCAATGGTCATCCCACTCGAAACATAGCCAAGTTCGATTTTAGCGGCGC
AACTCCAACACTGGACACAGGCTGGGCGACCACCTATGAACCGGAAGGTTGGGTGTCACAGTTAAAAGTCACTGACAGCC
ATATCTTGTCGTTCACAAATGGAACTGTGGGGTACTGGAATAAATCGAACGGAACTCAGTACGTTCCTGCAGTGGCCAGT
CCGGTGGGCGAAGGCACTTATTTGGGGGCTCTCAATGAAGGTGAAGAGTTGCTGTATGTGCATAAGTCCAAAACACTGGG
GCTTCCCGAAACCAGATATCTGGTCATGTATGATCCTGACGGAGAAGTGATGCCCTGGGCTCCTTCGCCCAATGACTATG
TCAAGTCCGTGGTTGTCCATGAGGGAAGGATTTTTGTCGGTGGCAGGTTCACCAACATTGGCGTAACACCTTCGGGCAAA
CGTTATCTGGTAGAGCTGGACACCGACGGGGAGGTCACCTCCTGGGATGCGGATGCCAATGACGAAATCTATGATATGCG
AAGCGTGCAGGGAAGTCTGCTGATTGCGGGTGAATTTACCAGTATTGGCAGCGATGGAATGGGAGCGGCTTATCTTGCAA
AACTCAGCTTCGTCGATGCGACAGGTGTGCCTTGGACAACTCAGGTGGACGGTCGGGTGTTTGGATTCGATATTGAAGGA
TCTGCCCTGGTGTTCGGTGGCGGTTTTTCAACGGTGGATGGTCAGGCTGTCGAAAATCTGGCAAAGGTGGATCTGAATAC
GGGGAGTCTGCTTGGTGGAACACCAACAGTCGACAGTTGGGTCAATGGCGTGGCTGTCATCGATGAAAAAGTTTATCTAT
TCGGGCAATTTACGGATGTGGGTGGTGAAGCCCGCTCGCGTCTGGCGGCTTTCAATCTTTCAAATGGTTCAGTGACCGCT
TGGGCGCCGAATATCGCCGTCTGGGCCTCCCGGGCCATGCGAGAAGTGTCCGGCAAGGTCATCGTGATGGCCCATTTCAA
CACGTACAATGGGGTCAGCTACACCGAGGGCACTCTGGTGCTGGATCCGGATACCGGGGCCAAAGTGGCAGATCCTCGAA
ATCTTTATAGTTCGACCGTCTGGCTTGAAGAGTAA

Upstream 100 bases:

>100_bases
AGGATGTCTAAGTGTCCTGATCTGGGGCAGGGCAATTAAGTCCCTGCAATCCTTGTCGGTGTAATTCATATTTGAGAACT
CGCATTCCGAAAAGTACTGT

Downstream 100 bases:

>100_bases
TGACGCCACGTTGCGCTGGCCCAAACCTTGCGTTCCGCAGGGCTTCATTGATAGTCTGAGGCCCTCTATGCAGTCGTAGT
TCAATGGATAGAGCACTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 704; Mature: 704

Protein sequence:

>704_residues
MRVLVLNVLLSGFALISVGCTLEANIAGQMLPSLLRPDGGEGVVDAPQISQKICANGPVFSQAEMPSGETILAGDFTRIG
PCSSPFLKYNPVTGAVESIGPSDAAVGEAHVIEADGAGGYYVGGYFEAKNGSQALIHIKPDGTLSDWNPQLSRGALAAGV
SALKVHDGVLYVGGDFTAAGSPSLSRTALAAFDIATGDLLPWAPPLTTDSFGDLHIRSIEIASGSIFIAGAFGTVGANLH
VSEGVAKINLTDNNADTSFAATGLSSQSGKMKWHNGTLVLVDGGGLVMLNSTNGANTGFVAGLTAVPAWGGFSDYELKGD
ELWIAGMFDAVNGHPTRNIAKFDFSGATPTLDTGWATTYEPEGWVSQLKVTDSHILSFTNGTVGYWNKSNGTQYVPAVAS
PVGEGTYLGALNEGEELLYVHKSKTLGLPETRYLVMYDPDGEVMPWAPSPNDYVKSVVVHEGRIFVGGRFTNIGVTPSGK
RYLVELDTDGEVTSWDADANDEIYDMRSVQGSLLIAGEFTSIGSDGMGAAYLAKLSFVDATGVPWTTQVDGRVFGFDIEG
SALVFGGGFSTVDGQAVENLAKVDLNTGSLLGGTPTVDSWVNGVAVIDEKVYLFGQFTDVGGEARSRLAAFNLSNGSVTA
WAPNIAVWASRAMREVSGKVIVMAHFNTYNGVSYTEGTLVLDPDTGAKVADPRNLYSSTVWLEE

Sequences:

>Translated_704_residues
MRVLVLNVLLSGFALISVGCTLEANIAGQMLPSLLRPDGGEGVVDAPQISQKICANGPVFSQAEMPSGETILAGDFTRIG
PCSSPFLKYNPVTGAVESIGPSDAAVGEAHVIEADGAGGYYVGGYFEAKNGSQALIHIKPDGTLSDWNPQLSRGALAAGV
SALKVHDGVLYVGGDFTAAGSPSLSRTALAAFDIATGDLLPWAPPLTTDSFGDLHIRSIEIASGSIFIAGAFGTVGANLH
VSEGVAKINLTDNNADTSFAATGLSSQSGKMKWHNGTLVLVDGGGLVMLNSTNGANTGFVAGLTAVPAWGGFSDYELKGD
ELWIAGMFDAVNGHPTRNIAKFDFSGATPTLDTGWATTYEPEGWVSQLKVTDSHILSFTNGTVGYWNKSNGTQYVPAVAS
PVGEGTYLGALNEGEELLYVHKSKTLGLPETRYLVMYDPDGEVMPWAPSPNDYVKSVVVHEGRIFVGGRFTNIGVTPSGK
RYLVELDTDGEVTSWDADANDEIYDMRSVQGSLLIAGEFTSIGSDGMGAAYLAKLSFVDATGVPWTTQVDGRVFGFDIEG
SALVFGGGFSTVDGQAVENLAKVDLNTGSLLGGTPTVDSWVNGVAVIDEKVYLFGQFTDVGGEARSRLAAFNLSNGSVTA
WAPNIAVWASRAMREVSGKVIVMAHFNTYNGVSYTEGTLVLDPDTGAKVADPRNLYSSTVWLEE
>Mature_704_residues
MRVLVLNVLLSGFALISVGCTLEANIAGQMLPSLLRPDGGEGVVDAPQISQKICANGPVFSQAEMPSGETILAGDFTRIG
PCSSPFLKYNPVTGAVESIGPSDAAVGEAHVIEADGAGGYYVGGYFEAKNGSQALIHIKPDGTLSDWNPQLSRGALAAGV
SALKVHDGVLYVGGDFTAAGSPSLSRTALAAFDIATGDLLPWAPPLTTDSFGDLHIRSIEIASGSIFIAGAFGTVGANLH
VSEGVAKINLTDNNADTSFAATGLSSQSGKMKWHNGTLVLVDGGGLVMLNSTNGANTGFVAGLTAVPAWGGFSDYELKGD
ELWIAGMFDAVNGHPTRNIAKFDFSGATPTLDTGWATTYEPEGWVSQLKVTDSHILSFTNGTVGYWNKSNGTQYVPAVAS
PVGEGTYLGALNEGEELLYVHKSKTLGLPETRYLVMYDPDGEVMPWAPSPNDYVKSVVVHEGRIFVGGRFTNIGVTPSGK
RYLVELDTDGEVTSWDADANDEIYDMRSVQGSLLIAGEFTSIGSDGMGAAYLAKLSFVDATGVPWTTQVDGRVFGFDIEG
SALVFGGGFSTVDGQAVENLAKVDLNTGSLLGGTPTVDSWVNGVAVIDEKVYLFGQFTDVGGEARSRLAAFNLSNGSVTA
WAPNIAVWASRAMREVSGKVIVMAHFNTYNGVSYTEGTLVLDPDTGAKVADPRNLYSSTVWLEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73734; Mature: 73734

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLVLNVLLSGFALISVGCTLEANIAGQMLPSLLRPDGGEGVVDAPQISQKICANGPVF
CEEEEEEHHHHCCEEEEECCEEEECCHHHHHHHHHCCCCCCCCEECHHHHHHHHCCCCCC
SQAEMPSGETILAGDFTRIGPCSSPFLKYNPVTGAVESIGPSDAAVGEAHVIEADGAGGY
CCCCCCCCCEEEECCCEECCCCCCCCEEECCCCCHHHHCCCCCCCCCCEEEEEECCCCCE
YVGGYFEAKNGSQALIHIKPDGTLSDWNPQLSRGALAAGVSALKVHDGVLYVGGDFTAAG
EEEEEEECCCCCEEEEEECCCCCCCCCCCCHHCCHHHHCCEEEEEECCEEEECCCCCCCC
SPSLSRTALAAFDIATGDLLPWAPPLTTDSFGDLHIRSIEIASGSIFIAGAFGTVGANLH
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCEEE
VSEGVAKINLTDNNADTSFAATGLSSQSGKMKWHNGTLVLVDGGGLVMLNSTNGANTGFV
ECCCEEEEEEECCCCCCEEEEECCCCCCCCEEEECCEEEEECCCCEEEEECCCCCCCCEE
AGLTAVPAWGGFSDYELKGDELWIAGMFDAVNGHPTRNIAKFDFSGATPTLDTGWATTYE
EEEEECCCCCCCCCCEECCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEC
PEGWVSQLKVTDSHILSFTNGTVGYWNKSNGTQYVPAVASPVGEGTYLGALNEGEELLYV
CCCCCEEEEEECCEEEEECCCEEEEEECCCCCEECCHHCCCCCCCEEEEECCCCCEEEEE
HKSKTLGLPETRYLVMYDPDGEVMPWAPSPNDYVKSVVVHEGRIFVGGRFTNIGVTPSGK
ECCCCCCCCCCEEEEEECCCCCEEECCCCCHHHHHEEEEECCEEEECCEEEEECCCCCCC
RYLVELDTDGEVTSWDADANDEIYDMRSVQGSLLIAGEFTSIGSDGMGAAYLAKLSFVDA
EEEEEECCCCCEEEECCCCCCCEEEHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEC
TGVPWTTQVDGRVFGFDIEGSALVFGGGFSTVDGQAVENLAKVDLNTGSLLGGTPTVDSW
CCCCEEEEECCEEEEEEECCCEEEEECCCCCCCCHHHHHHHEEECCCCCCCCCCCCHHHH
VNGVAVIDEKVYLFGQFTDVGGEARSRLAAFNLSNGSVTAWAPNIAVWASRAMREVSGKV
HCCEEEEECEEEEEEEEECCCCHHHCEEEEEECCCCCEEEECCCHHHHHHHHHHHHCCCE
IVMAHFNTYNGVSYTEGTLVLDPDTGAKVADPRNLYSSTVWLEE
EEEEEECCCCCCEEECCEEEECCCCCCCCCCCHHHHCCEEEEEC
>Mature Secondary Structure
MRVLVLNVLLSGFALISVGCTLEANIAGQMLPSLLRPDGGEGVVDAPQISQKICANGPVF
CEEEEEEHHHHCCEEEEECCEEEECCHHHHHHHHHCCCCCCCCEECHHHHHHHHCCCCCC
SQAEMPSGETILAGDFTRIGPCSSPFLKYNPVTGAVESIGPSDAAVGEAHVIEADGAGGY
CCCCCCCCCEEEECCCEECCCCCCCCEEECCCCCHHHHCCCCCCCCCCEEEEEECCCCCE
YVGGYFEAKNGSQALIHIKPDGTLSDWNPQLSRGALAAGVSALKVHDGVLYVGGDFTAAG
EEEEEEECCCCCEEEEEECCCCCCCCCCCCHHCCHHHHCCEEEEEECCEEEECCCCCCCC
SPSLSRTALAAFDIATGDLLPWAPPLTTDSFGDLHIRSIEIASGSIFIAGAFGTVGANLH
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCEEE
VSEGVAKINLTDNNADTSFAATGLSSQSGKMKWHNGTLVLVDGGGLVMLNSTNGANTGFV
ECCCEEEEEEECCCCCCEEEEECCCCCCCCEEEECCEEEEECCCCEEEEECCCCCCCCEE
AGLTAVPAWGGFSDYELKGDELWIAGMFDAVNGHPTRNIAKFDFSGATPTLDTGWATTYE
EEEEECCCCCCCCCCEECCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEC
PEGWVSQLKVTDSHILSFTNGTVGYWNKSNGTQYVPAVASPVGEGTYLGALNEGEELLYV
CCCCCEEEEEECCEEEEECCCEEEEEECCCCCEECCHHCCCCCCCEEEEECCCCCEEEEE
HKSKTLGLPETRYLVMYDPDGEVMPWAPSPNDYVKSVVVHEGRIFVGGRFTNIGVTPSGK
ECCCCCCCCCCEEEEEECCCCCEEECCCCCHHHHHEEEEECCEEEECCEEEEECCCCCCC
RYLVELDTDGEVTSWDADANDEIYDMRSVQGSLLIAGEFTSIGSDGMGAAYLAKLSFVDA
EEEEEECCCCCEEEECCCCCCCEEEHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEC
TGVPWTTQVDGRVFGFDIEGSALVFGGGFSTVDGQAVENLAKVDLNTGSLLGGTPTVDSW
CCCCEEEEECCEEEEEEECCCEEEEECCCCCCCCHHHHHHHEEECCCCCCCCCCCCHHHH
VNGVAVIDEKVYLFGQFTDVGGEARSRLAAFNLSNGSVTAWAPNIAVWASRAMREVSGKV
HCCEEEEECEEEEEEEEECCCCHHHCEEEEEECCCCCEEEECCCHHHHHHHHHHHHCCCE
IVMAHFNTYNGVSYTEGTLVLDPDTGAKVADPRNLYSSTVWLEE
EEEEEECCCCCCEEECCEEEECCCCCCCCCCCHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA