Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522718

Identifier: 42522718

GI number: 42522718

Start: 1120827

End: 1122062

Strand: Direct

Name: 42522718

Synonym: Bd1179

Alternate gene names: NA

Gene position: 1120827-1122062 (Clockwise)

Preceding gene: 42522717

Following gene: 42522719

Centisome position: 29.63

GC content: 48.06

Gene sequence:

>1236_bases
ATGGAAGTGTCACTTCGTTTTGCCATGTCTGGATTGCTTTGCCTGTTGCTGATCGCAACGGGCGGGTGTTCTTTTAAGAA
GGACCCGGCAAACGGCAAGGGAGCCCCGGTCACCCTGATCGAAGAAAAGGTCCTGCCTGAACATGTGGCCAGCCTGGATG
AGATTATTGCCGGAGACGACGAGGAAAAGGCCATCGAAGCCCTGGTTCAACGCAAAGACGAGCTGGCGGCATTGTCCCGC
GGTGGTGCAGTCAACGCGCTGGATCTGGCGATCAAACACGGAAAACAGAAAGTCGCGCAATTCCTGCTGATCAGCGGGCA
CAGTCCGTTTGTGCTGAATCAGGAAAGCCGAGAGAAGCTGACCTACGATGCGGCGATGGGCAAGCTGATTGAGTCGGCTC
AGCTTGATGGGATGATGGATATTCTGCGCAGTTATCCGAAGAAGACGCATGAAGGAATTTCGCCAGATACTTCCATGCAG
AAGTTCCGCGATCGCATTAATGAGTACAAACTTGACTATCGTGGCTGTGAGAAATTCGCAAATATGCTGATGGAGAGGGA
ATATCTTACCAGAAACCCGACGAAGCCAGGCTTATACTACGAGGCATTCAGTCAGTTGAAGCCTCGGGAGGTATTCAGCG
ATCTATTGAAAGACACTTCTTGTTCTGGTGAGACGACACGCTTTTCTACGGAATTGATTAATAAATGGGTTGGTTACGAG
TACTTGTATCAGTTTCAATCCAGCTTCAAGTCAATCGAATTTATCAAATCATTGGTATCTATGCGCAAAGGCGCGGCACT
ACTGATAGTTGTGCCAGCTAGTGGATGGCATGAGGATCATCTGGGTTTGATCTCAAGTCAGGTGAAGGTGAGCCCATTGG
CGATGTTGATGCTAAAACGAGATTGCTTTGCAAGCGAGGGACAGCGCGATGAGTGGGTGGACTTGGTTCGTGAGCTGATG
CTACAGTCTGGGCAGGAATATTCTTATCCTTATTATATGCCTGACGACATTCCAGATGGTTTAGGATCGTGCATGGGCGA
AAATAAATACTGTGCCAGCAATCCTCGCAATGTGGAGAGTCTGTATAAGATCTTCCGCTATACAAATTCAAAATCTCAGC
TATCGCAGACAGATTTCTATTCTCTATATACAGAGGAGCGTCGCGAGTTCGTTAAAATGAAACTTGATCAGTTCAAAGCC
GAAATCTGTACTGAACCACAAAGGAGGATGTTCTAA

Upstream 100 bases:

>100_bases
AAGTGGCCGCCCTTAAATGTCTCTTTGGATAGTGTCTTGACGGCCAAAGGCCTTTCAAAAGCTCATATTACGGGTATAGG
GCTTGCAAATATCGAAGATT

Downstream 100 bases:

>100_bases
TGAAGCACCTTCTGGTTTTGGTGGCATTCGTCTTCCTGGCTGCATGCTCGTTTGATAACGGCAAGTTTGACCCTGTGGAA
AAGAAGGTTTCAACAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MEVSLRFAMSGLLCLLLIATGGCSFKKDPANGKGAPVTLIEEKVLPEHVASLDEIIAGDDEEKAIEALVQRKDELAALSR
GGAVNALDLAIKHGKQKVAQFLLISGHSPFVLNQESREKLTYDAAMGKLIESAQLDGMMDILRSYPKKTHEGISPDTSMQ
KFRDRINEYKLDYRGCEKFANMLMEREYLTRNPTKPGLYYEAFSQLKPREVFSDLLKDTSCSGETTRFSTELINKWVGYE
YLYQFQSSFKSIEFIKSLVSMRKGAALLIVVPASGWHEDHLGLISSQVKVSPLAMLMLKRDCFASEGQRDEWVDLVRELM
LQSGQEYSYPYYMPDDIPDGLGSCMGENKYCASNPRNVESLYKIFRYTNSKSQLSQTDFYSLYTEERREFVKMKLDQFKA
EICTEPQRRMF

Sequences:

>Translated_411_residues
MEVSLRFAMSGLLCLLLIATGGCSFKKDPANGKGAPVTLIEEKVLPEHVASLDEIIAGDDEEKAIEALVQRKDELAALSR
GGAVNALDLAIKHGKQKVAQFLLISGHSPFVLNQESREKLTYDAAMGKLIESAQLDGMMDILRSYPKKTHEGISPDTSMQ
KFRDRINEYKLDYRGCEKFANMLMEREYLTRNPTKPGLYYEAFSQLKPREVFSDLLKDTSCSGETTRFSTELINKWVGYE
YLYQFQSSFKSIEFIKSLVSMRKGAALLIVVPASGWHEDHLGLISSQVKVSPLAMLMLKRDCFASEGQRDEWVDLVRELM
LQSGQEYSYPYYMPDDIPDGLGSCMGENKYCASNPRNVESLYKIFRYTNSKSQLSQTDFYSLYTEERREFVKMKLDQFKA
EICTEPQRRMF
>Mature_411_residues
MEVSLRFAMSGLLCLLLIATGGCSFKKDPANGKGAPVTLIEEKVLPEHVASLDEIIAGDDEEKAIEALVQRKDELAALSR
GGAVNALDLAIKHGKQKVAQFLLISGHSPFVLNQESREKLTYDAAMGKLIESAQLDGMMDILRSYPKKTHEGISPDTSMQ
KFRDRINEYKLDYRGCEKFANMLMEREYLTRNPTKPGLYYEAFSQLKPREVFSDLLKDTSCSGETTRFSTELINKWVGYE
YLYQFQSSFKSIEFIKSLVSMRKGAALLIVVPASGWHEDHLGLISSQVKVSPLAMLMLKRDCFASEGQRDEWVDLVRELM
LQSGQEYSYPYYMPDDIPDGLGSCMGENKYCASNPRNVESLYKIFRYTNSKSQLSQTDFYSLYTEERREFVKMKLDQFKA
EICTEPQRRMF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46801; Mature: 46801

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVSLRFAMSGLLCLLLIATGGCSFKKDPANGKGAPVTLIEEKVLPEHVASLDEIIAGDD
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCC
EEKAIEALVQRKDELAALSRGGAVNALDLAIKHGKQKVAQFLLISGHSPFVLNQESREKL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHH
TYDAAMGKLIESAQLDGMMDILRSYPKKTHEGISPDTSMQKFRDRINEYKLDYRGCEKFA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
NMLMEREYLTRNPTKPGLYYEAFSQLKPREVFSDLLKDTSCSGETTRFSTELINKWVGYE
HHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
YLYQFQSSFKSIEFIKSLVSMRKGAALLIVVPASGWHEDHLGLISSQVKVSPLAMLMLKR
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DCFASEGQRDEWVDLVRELMLQSGQEYSYPYYMPDDIPDGLGSCMGENKYCASNPRNVES
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHH
LYKIFRYTNSKSQLSQTDFYSLYTEERREFVKMKLDQFKAEICTEPQRRMF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MEVSLRFAMSGLLCLLLIATGGCSFKKDPANGKGAPVTLIEEKVLPEHVASLDEIIAGDD
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCC
EEKAIEALVQRKDELAALSRGGAVNALDLAIKHGKQKVAQFLLISGHSPFVLNQESREKL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHH
TYDAAMGKLIESAQLDGMMDILRSYPKKTHEGISPDTSMQKFRDRINEYKLDYRGCEKFA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
NMLMEREYLTRNPTKPGLYYEAFSQLKPREVFSDLLKDTSCSGETTRFSTELINKWVGYE
HHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
YLYQFQSSFKSIEFIKSLVSMRKGAALLIVVPASGWHEDHLGLISSQVKVSPLAMLMLKR
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DCFASEGQRDEWVDLVRELMLQSGQEYSYPYYMPDDIPDGLGSCMGENKYCASNPRNVES
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHH
LYKIFRYTNSKSQLSQTDFYSLYTEERREFVKMKLDQFKAEICTEPQRRMF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA